BLASTX nr result

ID: Panax21_contig00029630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029630
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279805.1| PREDICTED: mitochondrial inner membrane prot...   160   1e-37
ref|XP_002528106.1| mitochondrial inner membrane protease subuni...   159   2e-37
ref|XP_004137724.1| PREDICTED: mitochondrial inner membrane prot...   150   1e-34
gb|AFK44255.1| unknown [Lotus japonicus]                              149   2e-34
ref|XP_002323574.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33

>ref|XP_002279805.1| PREDICTED: mitochondrial inner membrane protease subunit 2 [Vitis
           vinifera] gi|297740215|emb|CBI30397.3| unnamed protein
           product [Vitis vinifera]
          Length = 170

 Score =  160 bits (404), Expect = 1e-37
 Identities = 74/113 (65%), Positives = 90/113 (79%)
 Frame = +2

Query: 50  MGSLNFLWNFSKKFFTFGLIGLTISDRYICIVPVRGCSMSPTFNPHCSTLLETSTADHAL 229
           MG+ NFLW+F KK FTFGLIGLTISDRY  I  V+G SM PTFNP+  T + + T D+ L
Sbjct: 1   MGTRNFLWDFGKKCFTFGLIGLTISDRYASIAHVQGLSMYPTFNPNARTFMGSLTDDYVL 60

Query: 230 VEKFCLEKYKFSLGDVVVFCSPNDHRKRYVKRITALPGDWIGLPYSYDAVKIP 388
           +EKFCLEKYKFS GDV+ F SPN+HR++ +KRI ALPGDWI  P+SYDA++IP
Sbjct: 61  LEKFCLEKYKFSHGDVIAFRSPNNHREKQIKRIIALPGDWITAPHSYDALRIP 113


>ref|XP_002528106.1| mitochondrial inner membrane protease subunit, putative [Ricinus
           communis] gi|223532495|gb|EEF34285.1| mitochondrial
           inner membrane protease subunit, putative [Ricinus
           communis]
          Length = 170

 Score =  159 bits (403), Expect = 2e-37
 Identities = 74/113 (65%), Positives = 90/113 (79%)
 Frame = +2

Query: 50  MGSLNFLWNFSKKFFTFGLIGLTISDRYICIVPVRGCSMSPTFNPHCSTLLETSTADHAL 229
           M S NFLW+ +KK+FT GLIG+TISDRY  IVPVRG SMSPTFNP  ST   +   D  L
Sbjct: 1   MASSNFLWSLAKKYFTVGLIGITISDRYASIVPVRGVSMSPTFNPGTSTFWGSFIDDCVL 60

Query: 230 VEKFCLEKYKFSLGDVVVFCSPNDHRKRYVKRITALPGDWIGLPYSYDAVKIP 388
           VEKFCLEKY+FS GDVVVF SP++H+++++KRI  LPGDWIG P++YD VK+P
Sbjct: 61  VEKFCLEKYRFSHGDVVVFRSPSNHKEKHIKRIIGLPGDWIGTPHAYDVVKVP 113


>ref|XP_004137724.1| PREDICTED: mitochondrial inner membrane protease subunit 2-like
           [Cucumis sativus] gi|449483475|ref|XP_004156603.1|
           PREDICTED: mitochondrial inner membrane protease subunit
           2-like [Cucumis sativus]
          Length = 184

 Score =  150 bits (378), Expect = 1e-34
 Identities = 68/113 (60%), Positives = 87/113 (76%)
 Frame = +2

Query: 50  MGSLNFLWNFSKKFFTFGLIGLTISDRYICIVPVRGCSMSPTFNPHCSTLLETSTADHAL 229
           M + N +WN  KK FTFG+IG+TISDRY  +VP+RG SMSPTFNP  ++L    T D+ L
Sbjct: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRGASMSPTFNPIATSLTGPMTGDYVL 60

Query: 230 VEKFCLEKYKFSLGDVVVFCSPNDHRKRYVKRITALPGDWIGLPYSYDAVKIP 388
           VEKFCLEKYKFS GDV+V+ SP +++++ VKRI ALPGDW+G   +YD VK+P
Sbjct: 61  VEKFCLEKYKFSPGDVIVYRSPCNYKEKQVKRIIALPGDWVGTRQTYDVVKVP 113


>gb|AFK44255.1| unknown [Lotus japonicus]
          Length = 173

 Score =  149 bits (377), Expect = 2e-34
 Identities = 69/113 (61%), Positives = 88/113 (77%)
 Frame = +2

Query: 50  MGSLNFLWNFSKKFFTFGLIGLTISDRYICIVPVRGCSMSPTFNPHCSTLLETSTADHAL 229
           MG   FLWNF+KKF TFGLI +T+SDRY+ +VPVRG SMSPTFNP   +L+   + D   
Sbjct: 1   MGPSGFLWNFTKKFVTFGLISVTVSDRYMTVVPVRGGSMSPTFNPKTHSLMGGVSDDCVF 60

Query: 230 VEKFCLEKYKFSLGDVVVFCSPNDHRKRYVKRITALPGDWIGLPYSYDAVKIP 388
           VEKFCL+KYKFS GDV+VF SP +H++ ++KRI ALPG+WIG  ++YD +KIP
Sbjct: 61  VEKFCLQKYKFSHGDVMVFRSPLNHKETHIKRIIALPGEWIGAHHNYDVLKIP 113


>ref|XP_002323574.1| predicted protein [Populus trichocarpa] gi|222868204|gb|EEF05335.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  144 bits (364), Expect = 6e-33
 Identities = 71/113 (62%), Positives = 87/113 (76%)
 Frame = +2

Query: 50  MGSLNFLWNFSKKFFTFGLIGLTISDRYICIVPVRGCSMSPTFNPHCSTLLETSTADHAL 229
           MGS + LWN +KK+ T G+IGLTI+DRY  +VPVRG SMSPTFNP  +T+L  S  D  L
Sbjct: 1   MGSGSLLWNLTKKYLTVGVIGLTITDRYASVVPVRGGSMSPTFNPRTNTVLG-SLDDRVL 59

Query: 230 VEKFCLEKYKFSLGDVVVFCSPNDHRKRYVKRITALPGDWIGLPYSYDAVKIP 388
           +EKFCL KYKFS GDVVVF SP+DH+++ +KRI  LPGDW+G P + D VKIP
Sbjct: 60  IEKFCLAKYKFSHGDVVVFRSPSDHKQKLIKRIIGLPGDWMGTPQN-DVVKIP 111


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