BLASTX nr result

ID: Panax21_contig00029567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029567
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002725328.2| PREDICTED: uncharacterized protein LOC680498...   215   1e-53
tpg|DAA45649.1| TPA: histone H3 [Zea mays]                            213   4e-53
ref|XP_003241032.1| PREDICTED: histone H3-like [Acyrthosiphon pi...   213   5e-53
ref|XP_003944792.1| PREDICTED: histone H3.1-like [Saimiri bolivi...   212   7e-53
ref|XP_003732612.1| PREDICTED: uncharacterized protein LOC100406...   212   7e-53

>ref|XP_002725328.2| PREDICTED: uncharacterized protein LOC680498 [Rattus norvegicus]
           gi|392354401|ref|XP_001057443.2| PREDICTED:
           uncharacterized protein LOC680498 [Rattus norvegicus]
          Length = 325

 Score =  215 bits (547), Expect = 1e-53
 Identities = 114/142 (80%), Positives = 118/142 (83%), Gaps = 1/142 (0%)
 Frame = -1

Query: 773 FLC-HSLSNSYYHQSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPG 597
           FLC H + +S     MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPG
Sbjct: 175 FLCTHLILHSSQRSQMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPG 234

Query: 596 TVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLF 417
           TVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                VGLF
Sbjct: 235 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLF 294

Query: 416 EDTNLCAIHAKRVTIMPKDIQL 351
           EDTNLCAIHAKRVTIMPKDIQL
Sbjct: 295 EDTNLCAIHAKRVTIMPKDIQL 316



 Score =  209 bits (532), Expect = 6e-52
 Identities = 109/127 (85%), Positives = 111/127 (87%)
 Frame = -1

Query: 731 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 552
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 551 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTI 372
           LLIRKLPFQRLVREIAQDFKTDLRF                VGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVIALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 371 MPKDIQL 351
           MPKDIQL
Sbjct: 121 MPKDIQL 127


>tpg|DAA45649.1| TPA: histone H3 [Zea mays]
          Length = 165

 Score =  213 bits (542), Expect = 4e-53
 Identities = 111/130 (85%), Positives = 112/130 (86%)
 Frame = -1

Query: 740 HQSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQK 561
           H SMARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQK
Sbjct: 27  HASMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 86

Query: 560 STELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKR 381
           STELLIRKLPFQRLVREIAQDFKTDLRF                VGLFEDTNLCAIHAKR
Sbjct: 87  STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 146

Query: 380 VTIMPKDIQL 351
           VTIMPKDIQL
Sbjct: 147 VTIMPKDIQL 156


>ref|XP_003241032.1| PREDICTED: histone H3-like [Acyrthosiphon pisum]
          Length = 157

 Score =  213 bits (541), Expect = 5e-53
 Identities = 112/140 (80%), Positives = 117/140 (83%)
 Frame = -1

Query: 770 LCHSLSNSYYHQSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTV 591
           L H +++S     MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTV
Sbjct: 9   LFHRITSSTNSFDMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTV 68

Query: 590 ALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFED 411
           ALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                VGLFED
Sbjct: 69  ALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFED 128

Query: 410 TNLCAIHAKRVTIMPKDIQL 351
           TNLCAIHAKRVTIMPKDIQL
Sbjct: 129 TNLCAIHAKRVTIMPKDIQL 148


>ref|XP_003944792.1| PREDICTED: histone H3.1-like [Saimiri boliviensis boliviensis]
          Length = 183

 Score =  212 bits (540), Expect = 7e-53
 Identities = 114/145 (78%), Positives = 120/145 (82%)
 Frame = -1

Query: 785 TKSQFLCHSLSNSYYHQSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRF 606
           T+S   C S ++S    +MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+
Sbjct: 34  TRSVACCESEASS----TMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRY 89

Query: 605 RPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXV 426
           RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                V
Sbjct: 90  RPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLV 149

Query: 425 GLFEDTNLCAIHAKRVTIMPKDIQL 351
           GLFEDTNLCAIHAKRVTIMPKDIQL
Sbjct: 150 GLFEDTNLCAIHAKRVTIMPKDIQL 174


>ref|XP_003732612.1| PREDICTED: uncharacterized protein LOC100406435 [Callithrix
           jacchus]
          Length = 1266

 Score =  212 bits (540), Expect = 7e-53
 Identities = 114/145 (78%), Positives = 120/145 (82%)
 Frame = -1

Query: 785 TKSQFLCHSLSNSYYHQSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRF 606
           T+S   C S ++S    +MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+
Sbjct: 6   TRSVASCQSKASS----AMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRY 61

Query: 605 RPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXV 426
           RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                V
Sbjct: 62  RPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLV 121

Query: 425 GLFEDTNLCAIHAKRVTIMPKDIQL 351
           GLFEDTNLCAIHAKRVTIMPKDIQL
Sbjct: 122 GLFEDTNLCAIHAKRVTIMPKDIQL 146



 Score =  210 bits (535), Expect = 3e-52
 Identities = 110/134 (82%), Positives = 113/134 (84%)
 Frame = -1

Query: 752  NSYYHQSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIR 573
            N    + MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR
Sbjct: 1124 NDSSSEGMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIR 1183

Query: 572  KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAI 393
            +YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                VGLFEDTNLCAI
Sbjct: 1184 RYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAI 1243

Query: 392  HAKRVTIMPKDIQL 351
            HAKRVTIMPKDIQL
Sbjct: 1244 HAKRVTIMPKDIQL 1257


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