BLASTX nr result
ID: Panax21_contig00029440
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00029440 (402 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003543345.1| PREDICTED: thylakoid lumenal protein At1g036... 166 1e-39 ref|XP_002302130.1| predicted protein [Populus trichocarpa] gi|2... 164 5e-39 ref|XP_003540354.1| PREDICTED: thylakoid lumenal protein At1g036... 164 7e-39 gb|ACU20233.1| unknown [Glycine max] 164 7e-39 ref|XP_002512708.1| Photosystem II 11 kDa protein precursor, put... 162 2e-38 >ref|XP_003543345.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like [Glycine max] Length = 169 Score = 166 bits (421), Expect = 1e-39 Identities = 83/91 (91%), Positives = 88/91 (96%) Frame = +1 Query: 4 EVINKIRTTISKDKNDPNVADAVAELRETSNSWVAKYRKEKALLGRSSFRDIYSALNAVS 183 EVINK+RTTI DKNDPNVA AVAELRETSNSWVAKYR+EKALLGR+SFRDIYSALNAVS Sbjct: 75 EVINKVRTTIVMDKNDPNVATAVAELRETSNSWVAKYRREKALLGRASFRDIYSALNAVS 134 Query: 184 GHYISFGPTAPIPAKRRARILEEMETAEKAL 276 GHYISFGPTAPIPAKRRARILEE++TAEKAL Sbjct: 135 GHYISFGPTAPIPAKRRARILEEVDTAEKAL 165 >ref|XP_002302130.1| predicted protein [Populus trichocarpa] gi|222843856|gb|EEE81403.1| predicted protein [Populus trichocarpa] Length = 176 Score = 164 bits (416), Expect = 5e-39 Identities = 78/91 (85%), Positives = 89/91 (97%) Frame = +1 Query: 4 EVINKIRTTISKDKNDPNVADAVAELRETSNSWVAKYRKEKALLGRSSFRDIYSALNAVS 183 +VINK+RTT++ DKNDPNVADAVA LRETSNSWVAKYR+EKALLGR+SFRD+YSALNAV+ Sbjct: 82 DVINKVRTTVNMDKNDPNVADAVANLRETSNSWVAKYRREKALLGRASFRDMYSALNAVT 141 Query: 184 GHYISFGPTAPIPAKRRARILEEMETAEKAL 276 GHY+SFGPTAPIP+KRRARILEEM+TAEKAL Sbjct: 142 GHYVSFGPTAPIPSKRRARILEEMDTAEKAL 172 >ref|XP_003540354.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like [Glycine max] Length = 173 Score = 164 bits (415), Expect = 7e-39 Identities = 82/91 (90%), Positives = 87/91 (95%) Frame = +1 Query: 4 EVINKIRTTISKDKNDPNVADAVAELRETSNSWVAKYRKEKALLGRSSFRDIYSALNAVS 183 EVINK+RTTI DKNDPNVA AVAELRETSNSWVAKYR+EKALLGR SFRD+YSALNAVS Sbjct: 79 EVINKVRTTIVMDKNDPNVATAVAELRETSNSWVAKYRREKALLGRVSFRDMYSALNAVS 138 Query: 184 GHYISFGPTAPIPAKRRARILEEMETAEKAL 276 GHYISFGPTAPIPAKRRARILEE++TAEKAL Sbjct: 139 GHYISFGPTAPIPAKRRARILEEVDTAEKAL 169 >gb|ACU20233.1| unknown [Glycine max] Length = 110 Score = 164 bits (415), Expect = 7e-39 Identities = 82/91 (90%), Positives = 87/91 (95%) Frame = +1 Query: 4 EVINKIRTTISKDKNDPNVADAVAELRETSNSWVAKYRKEKALLGRSSFRDIYSALNAVS 183 EVINK+RTTI DKNDPNVA AVAELRETSNSWVAKYR+EKALLGR SFRD+YSALNAVS Sbjct: 16 EVINKVRTTIVMDKNDPNVATAVAELRETSNSWVAKYRREKALLGRVSFRDMYSALNAVS 75 Query: 184 GHYISFGPTAPIPAKRRARILEEMETAEKAL 276 GHYISFGPTAPIPAKRRARILEE++TAEKAL Sbjct: 76 GHYISFGPTAPIPAKRRARILEEVDTAEKAL 106 >ref|XP_002512708.1| Photosystem II 11 kDa protein precursor, putative [Ricinus communis] gi|223548669|gb|EEF50160.1| Photosystem II 11 kDa protein precursor, putative [Ricinus communis] Length = 173 Score = 162 bits (411), Expect = 2e-38 Identities = 80/92 (86%), Positives = 89/92 (96%) Frame = +1 Query: 1 GEVINKIRTTISKDKNDPNVADAVAELRETSNSWVAKYRKEKALLGRSSFRDIYSALNAV 180 GEVI+KIR+TI+ +KNDPNVA AVAELRETSNSWVAKYR+EK LLGR+SFRDIYSALNAV Sbjct: 78 GEVIDKIRSTINMEKNDPNVATAVAELRETSNSWVAKYRREKTLLGRTSFRDIYSALNAV 137 Query: 181 SGHYISFGPTAPIPAKRRARILEEMETAEKAL 276 SGHYISFGPTAPIPAKR+ARILEEM++AEKAL Sbjct: 138 SGHYISFGPTAPIPAKRKARILEEMDSAEKAL 169