BLASTX nr result

ID: Panax21_contig00029440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029440
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543345.1| PREDICTED: thylakoid lumenal protein At1g036...   166   1e-39
ref|XP_002302130.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-39
ref|XP_003540354.1| PREDICTED: thylakoid lumenal protein At1g036...   164   7e-39
gb|ACU20233.1| unknown [Glycine max]                                  164   7e-39
ref|XP_002512708.1| Photosystem II 11 kDa protein precursor, put...   162   2e-38

>ref|XP_003543345.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
           [Glycine max]
          Length = 169

 Score =  166 bits (421), Expect = 1e-39
 Identities = 83/91 (91%), Positives = 88/91 (96%)
 Frame = +1

Query: 4   EVINKIRTTISKDKNDPNVADAVAELRETSNSWVAKYRKEKALLGRSSFRDIYSALNAVS 183
           EVINK+RTTI  DKNDPNVA AVAELRETSNSWVAKYR+EKALLGR+SFRDIYSALNAVS
Sbjct: 75  EVINKVRTTIVMDKNDPNVATAVAELRETSNSWVAKYRREKALLGRASFRDIYSALNAVS 134

Query: 184 GHYISFGPTAPIPAKRRARILEEMETAEKAL 276
           GHYISFGPTAPIPAKRRARILEE++TAEKAL
Sbjct: 135 GHYISFGPTAPIPAKRRARILEEVDTAEKAL 165


>ref|XP_002302130.1| predicted protein [Populus trichocarpa] gi|222843856|gb|EEE81403.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  164 bits (416), Expect = 5e-39
 Identities = 78/91 (85%), Positives = 89/91 (97%)
 Frame = +1

Query: 4   EVINKIRTTISKDKNDPNVADAVAELRETSNSWVAKYRKEKALLGRSSFRDIYSALNAVS 183
           +VINK+RTT++ DKNDPNVADAVA LRETSNSWVAKYR+EKALLGR+SFRD+YSALNAV+
Sbjct: 82  DVINKVRTTVNMDKNDPNVADAVANLRETSNSWVAKYRREKALLGRASFRDMYSALNAVT 141

Query: 184 GHYISFGPTAPIPAKRRARILEEMETAEKAL 276
           GHY+SFGPTAPIP+KRRARILEEM+TAEKAL
Sbjct: 142 GHYVSFGPTAPIPSKRRARILEEMDTAEKAL 172


>ref|XP_003540354.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
           [Glycine max]
          Length = 173

 Score =  164 bits (415), Expect = 7e-39
 Identities = 82/91 (90%), Positives = 87/91 (95%)
 Frame = +1

Query: 4   EVINKIRTTISKDKNDPNVADAVAELRETSNSWVAKYRKEKALLGRSSFRDIYSALNAVS 183
           EVINK+RTTI  DKNDPNVA AVAELRETSNSWVAKYR+EKALLGR SFRD+YSALNAVS
Sbjct: 79  EVINKVRTTIVMDKNDPNVATAVAELRETSNSWVAKYRREKALLGRVSFRDMYSALNAVS 138

Query: 184 GHYISFGPTAPIPAKRRARILEEMETAEKAL 276
           GHYISFGPTAPIPAKRRARILEE++TAEKAL
Sbjct: 139 GHYISFGPTAPIPAKRRARILEEVDTAEKAL 169


>gb|ACU20233.1| unknown [Glycine max]
          Length = 110

 Score =  164 bits (415), Expect = 7e-39
 Identities = 82/91 (90%), Positives = 87/91 (95%)
 Frame = +1

Query: 4   EVINKIRTTISKDKNDPNVADAVAELRETSNSWVAKYRKEKALLGRSSFRDIYSALNAVS 183
           EVINK+RTTI  DKNDPNVA AVAELRETSNSWVAKYR+EKALLGR SFRD+YSALNAVS
Sbjct: 16  EVINKVRTTIVMDKNDPNVATAVAELRETSNSWVAKYRREKALLGRVSFRDMYSALNAVS 75

Query: 184 GHYISFGPTAPIPAKRRARILEEMETAEKAL 276
           GHYISFGPTAPIPAKRRARILEE++TAEKAL
Sbjct: 76  GHYISFGPTAPIPAKRRARILEEVDTAEKAL 106


>ref|XP_002512708.1| Photosystem II 11 kDa protein precursor, putative [Ricinus
           communis] gi|223548669|gb|EEF50160.1| Photosystem II 11
           kDa protein precursor, putative [Ricinus communis]
          Length = 173

 Score =  162 bits (411), Expect = 2e-38
 Identities = 80/92 (86%), Positives = 89/92 (96%)
 Frame = +1

Query: 1   GEVINKIRTTISKDKNDPNVADAVAELRETSNSWVAKYRKEKALLGRSSFRDIYSALNAV 180
           GEVI+KIR+TI+ +KNDPNVA AVAELRETSNSWVAKYR+EK LLGR+SFRDIYSALNAV
Sbjct: 78  GEVIDKIRSTINMEKNDPNVATAVAELRETSNSWVAKYRREKTLLGRTSFRDIYSALNAV 137

Query: 181 SGHYISFGPTAPIPAKRRARILEEMETAEKAL 276
           SGHYISFGPTAPIPAKR+ARILEEM++AEKAL
Sbjct: 138 SGHYISFGPTAPIPAKRKARILEEMDSAEKAL 169


Top