BLASTX nr result

ID: Panax21_contig00029435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029435
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271443.2| PREDICTED: anaphase-promoting complex subuni...   164   1e-38
emb|CAN71416.1| hypothetical protein VITISV_029547 [Vitis vinifera]   162   5e-38
ref|XP_003552871.1| PREDICTED: anaphase-promoting complex subuni...   129   6e-28
ref|XP_003537460.1| PREDICTED: anaphase-promoting complex subuni...   123   4e-26
ref|XP_003621706.1| Anaphase-promoting complex subunit [Medicago...   121   1e-25

>ref|XP_002271443.2| PREDICTED: anaphase-promoting complex subunit 2-like [Vitis
           vinifera] gi|296086344|emb|CBI31933.3| unnamed protein
           product [Vitis vinifera]
          Length = 883

 Score =  164 bits (416), Expect = 1e-38
 Identities = 112/253 (44%), Positives = 143/253 (56%), Gaps = 33/253 (13%)
 Frame = -1

Query: 660 ILESWDGFCFPTESVVEFNGDHRSFSSEFVSLKFTLF-ASTDFNLQKHFLCSIQ------ 502
           I+ESWDGFC  TE+++  +GD  S  SEFVS   +L   S    +Q HFL S++      
Sbjct: 24  IMESWDGFCRATEALLNGHGD-LSVGSEFVSHVHSLCKRSLGSLVQDHFLRSLEETFERN 82

Query: 501 ------------------------IQEDEIQRVLRKALEKISLEKQYQERCVSMVAHALH 394
                                   IQE+ IQ+VL KAL+ +SLEKQYQE+C+ M+ HAL 
Sbjct: 83  GATRFWRHFDAYTHVEVMEMSKSPIQENGIQKVLYKALDDVSLEKQYQEKCLLMLVHALQ 142

Query: 393 SYKDSTSEGTHKSYAKSIYLSSNIN*QCLQHL*PLFLAIFLRYSTGILG--KTGRTEYKF 220
           SYKDS SE  H S A+ I+L S         +  + +    R+   IL     GR E   
Sbjct: 143 SYKDSISEERHNSDAERIHLFSKYQ----LIVSSVLMTTLPRHFPEILHCYFKGRLEELS 198

Query: 219 GTLGGEYQDVNESHDKVCMDLDNKNKLPNRTGDMEIDGLYPRGRLLENNKLMKNVGKVVH 40
             + GEY+D NES DK  MDLD KNK+  R G+M+ID  Y R + LENNKL+KN+GKVV 
Sbjct: 199 TIMAGEYEDDNESDDKDDMDLDEKNKVSYR-GEMDIDECYQRRKFLENNKLVKNIGKVVR 257

Query: 39  DLRIFGFSSMAED 1
           DLR  GF+SMAED
Sbjct: 258 DLRNLGFTSMAED 270


>emb|CAN71416.1| hypothetical protein VITISV_029547 [Vitis vinifera]
          Length = 793

 Score =  162 bits (410), Expect = 5e-38
 Identities = 111/253 (43%), Positives = 143/253 (56%), Gaps = 33/253 (13%)
 Frame = -1

Query: 660 ILESWDGFCFPTESVVEFNGDHRSFSSEFVSLKFTLFASTDFNL-QKHFLCSIQ------ 502
           I+ESWDGFC  TE+++  +GD  S  SEFVS   +L   +  +L Q HFL S++      
Sbjct: 24  IMESWDGFCRATEALLNGHGD-LSVGSEFVSHVHSLCKRSLGSLVQDHFLRSLEETFERN 82

Query: 501 ------------------------IQEDEIQRVLRKALEKISLEKQYQERCVSMVAHALH 394
                                   I E+ IQ+VL KAL+ +SLEKQYQE+C+ M+ HAL 
Sbjct: 83  GAXRFWRHFDAYTHVEVMEMSKSPIXENGIQKVLYKALDDVSLEKQYQEKCLLMLVHALQ 142

Query: 393 SYKDSTSEGTHKSYAKSIYLSSNIN*QCLQHL*PLFLAIFLRYSTGILG--KTGRTEYKF 220
           SYKDS SE  H S A+ I+L S         +  + +    R+   IL     GR E   
Sbjct: 143 SYKDSISEERHNSDAERIHLFSKYQ----LIVSSVLMTTLPRHFPEILHCYFKGRLEELS 198

Query: 219 GTLGGEYQDVNESHDKVCMDLDNKNKLPNRTGDMEIDGLYPRGRLLENNKLMKNVGKVVH 40
             + GEY+D NES DK  MDLD KNK+  R G+M+ID  Y R + LENNKL+KN+GKVV 
Sbjct: 199 TIMAGEYEDDNESDDKDDMDLDEKNKVSYR-GEMDIDECYQRRKFLENNKLVKNIGKVVR 257

Query: 39  DLRIFGFSSMAED 1
           DLR  GF+SMAED
Sbjct: 258 DLRNLGFTSMAED 270


>ref|XP_003552871.1| PREDICTED: anaphase-promoting complex subunit 2-like [Glycine max]
          Length = 882

 Score =  129 bits (323), Expect = 6e-28
 Identities = 96/252 (38%), Positives = 127/252 (50%), Gaps = 32/252 (12%)
 Frame = -1

Query: 660 ILESWDGFCFPTESVVEFNGDHRSFSSEFVSLKFTLFASTDFNL-QKHFLCSIQIQ---- 496
           IL+ ++GFC  T+S++  NGD  S + +FVSL   L      +L Q HF   ++      
Sbjct: 25  ILDGYNGFCNATQSLLVGNGD-LSVAPDFVSLVHVLCKHRLRSLVQDHFFRLLEETFERN 83

Query: 495 ------------------------EDEIQRVLRKALEKISLEKQYQERCVSMVAHALHSY 388
                                   +DEIQ VL KALE I+LEKQYQE+C+ M+ HAL SY
Sbjct: 84  GASRFWRHFDPYSRVAGLNKNDDLDDEIQSVLYKALEDITLEKQYQEKCLLMLVHALQSY 143

Query: 387 KDSTSEGTHKSYAKSIYLSSN---IN*QCLQHL*PLFLAIFLRYSTGILGKTGRTEYKFG 217
           KD  SE  H       YL+S    I    L    P    + L +         + E    
Sbjct: 144 KDQVSEDKHGFEGDRNYLTSKYQWIVSSVLMASLPRHFPVILHWYF-----KRKLEELST 198

Query: 216 TLGGEYQDVNESHDKVCMDLDNKNKLPNRTGDMEIDGLYPRGRLLENNKLMKNVGKVVHD 37
            + GE+ D + S +K CMDLD K KL N+ G+M++D  Y   R  EN KL+KN+GKVV D
Sbjct: 199 IMDGEFGD-DASQNKDCMDLDEKGKLCNKVGEMDVDECYNDHRFSENCKLVKNIGKVVLD 257

Query: 36  LRIFGFSSMAED 1
           LR  GF+S AED
Sbjct: 258 LRNLGFTSTAED 269


>ref|XP_003537460.1| PREDICTED: anaphase-promoting complex subunit 2-like [Glycine max]
          Length = 883

 Score =  123 bits (308), Expect = 4e-26
 Identities = 93/258 (36%), Positives = 133/258 (51%), Gaps = 38/258 (14%)
 Frame = -1

Query: 660 ILESWDGFCFPTESVVEFNGDHRSFSSEFVSLKFTLFASTDFNL-QKHFLCSIQIQ---- 496
           IL+S++ FC  T+S++  NGD  S +S+FVS   TL      +L Q HF   ++      
Sbjct: 25  ILDSYNDFCNATQSLLAGNGD-LSVASDFVSHVHTLCKHRLRSLVQDHFFRLLEETFERN 83

Query: 495 --------------------------EDEIQRVLRKALEKISLEKQYQERCVSMVAHALH 394
                                      DEIQ VL  ALE+I+LEKQYQE+C+ M+ HAL 
Sbjct: 84  GASRFWRHFDPYFHVAGLNKNDDLDVSDEIQSVLYNALEEITLEKQYQEKCLLMLVHALQ 143

Query: 393 SYKDSTSEGTH-----KSYAKSIY--LSSNIN*QCLQHL*PLFLAIFLRYSTGILGKTGR 235
           SYKD  SE  H     ++Y  S Y  + S++    L    P+ L  + +          +
Sbjct: 144 SYKDQVSEDKHGFEGDRNYLTSKYQWIVSSVLMASLSRHFPVILHWYFKR---------K 194

Query: 234 TEYKFGTLGGEYQDVNESHDKVCMDLDNKNKLPNRTGDMEIDGLYPRGRLLENNKLMKNV 55
            E     + GE+ D + S +K  M+LD K K+ N+ G+M++D  Y   R  EN++L+KN+
Sbjct: 195 LEEVSAIMDGEFCD-DASQNKDGMNLDEKGKICNKVGEMDVDECYSDHRFSENSRLVKNI 253

Query: 54  GKVVHDLRIFGFSSMAED 1
           GKVV DLR  GF+SMAED
Sbjct: 254 GKVVLDLRNLGFTSMAED 271


>ref|XP_003621706.1| Anaphase-promoting complex subunit [Medicago truncatula]
           gi|355496721|gb|AES77924.1| Anaphase-promoting complex
           subunit [Medicago truncatula]
          Length = 908

 Score =  121 bits (304), Expect = 1e-25
 Identities = 95/255 (37%), Positives = 132/255 (51%), Gaps = 35/255 (13%)
 Frame = -1

Query: 660 ILESWDGFCFPTESVVEFNGDHRSFSS-EFVSLKFTLFA-STDFNLQKHFLC-------- 511
           I+ES++ FC  T+S++    DH SF++ +FVS   TL        L  HFL         
Sbjct: 38  IIESYNAFCNATQSLLLH--DHISFTTHQFVSHVHTLCKHGLQSLLTPHFLKVLEETFER 95

Query: 510 --------------------SIQIQEDEIQRVLRKALEKISLEKQYQERCVSMVAHALHS 391
                                I I EDEI+ VL  ALE+ISLEKQY E+C+ ++ HAL S
Sbjct: 96  NGALRFWQHFVPYAGLNNNDDINIDEDEIESVLCNALEEISLEKQYHEKCLLILVHALQS 155

Query: 390 YKDSTSE-GTHKSY-AKSIYLSSN---IN*QCLQHL*PLFLAIFLRYSTGILGKTGRTEY 226
           + D  SE G H ++ A++ YL+S    I    L    P    + L +         R E 
Sbjct: 156 FNDQMSEEGMHNNFEAETNYLTSKYQWIVSSVLMTTLPRVFPVILHWYF-----KRRLEE 210

Query: 225 KFGTLGGEYQDVNESHDKVCMDLDNKNKLPNRTGDMEIDGLYPRGRLLENNKLMKNVGKV 46
               + GE+ D + S +K  MDLD K K+ N+ GDM++D  Y   R  EN+K++KN+GKV
Sbjct: 211 LHTPMDGEFAD-DVSQNKDGMDLDEKGKICNKDGDMDVDECYSDRRFSENSKMVKNIGKV 269

Query: 45  VHDLRIFGFSSMAED 1
           V DL+  GF+SMAED
Sbjct: 270 VLDLKSLGFTSMAED 284


Top