BLASTX nr result
ID: Panax21_contig00029230
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00029230
(891 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE77588.1| unknown [Picea sitchensis] 231 7e-81
gb|ABK26521.1| unknown [Picea sitchensis] 221 1e-78
ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|2... 221 7e-78
dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana] 220 1e-77
ref|NP_001078212.1| pentatricopeptide repeat-containing protein ... 220 1e-77
>gb|ADE77588.1| unknown [Picea sitchensis]
Length = 312
Score = 231 bits (588), Expect(2) = 7e-81
Identities = 105/211 (49%), Positives = 152/211 (72%)
Frame = +3
Query: 3 RPDAVTFVGILTGFSHKGMVQEGWKYFNKMSMEYHIKPGLEHYSCMVDMLGRAGRLIEAE 182
+P+ +TF+ +L+ SH G+V EGWK +N M+++Y I P +EHY+CMVD+LGRAG L EA
Sbjct: 38 KPNEITFISVLSACSHAGLVDEGWKCYNCMTLDYAITPTVEHYACMVDLLGRAGHLNEAW 97
Query: 183 NLVRNMVVNPDSSIWGGLLNACKIHRNVEIAERAVAEILRLDSNTAGWYVLMSNIYAIAG 362
+ + M + P +S+WG L +C+IH N+E+ ER +L LD + AG+YVL+SNIYA AG
Sbjct: 98 DFIEKMPIEPGASVWGAFLGSCRIHCNIELGERVAELLLNLDPDNAGYYVLLSNIYAAAG 157
Query: 363 QWDQVAKMRMKMKEKKLTKEPGWSSIEVGGKIHSFLVCDQSHPRSKEIYAFLKDVKKRMT 542
+WD VAK+R MKEK + K PG S IEV K+HSF+V D SHP+++ IYA L+ + ++M
Sbjct: 158 RWDDVAKVRKMMKEKDVKKSPGCSLIEVNNKLHSFVVGDISHPQTEAIYAMLETLARQME 217
Query: 543 LEGYVADTNCVLEKLDQELKEDILCGHSERL 635
GYV T+ VL +++E+KE++L HSE+L
Sbjct: 218 AVGYVPCTDFVLHDVEEEIKENMLFAHSEKL 248
Score = 97.1 bits (240), Expect(2) = 7e-81
Identities = 38/60 (63%), Positives = 50/60 (83%)
Frame = +2
Query: 635 GILNTMEGDVLRVMKNLRICVDCHNVTKFISRVSKREIIVRDTKRFHHFKDGMCSCGNYW 814
G+++T G +R+ KNLR+C DCH+ TKFIS++ KREII+RD RFHHFKDG+CSCG+YW
Sbjct: 253 GLISTRSGTSIRITKNLRVCGDCHSATKFISKIVKREIIMRDLNRFHHFKDGLCSCGDYW 312
>gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 221 bits (564), Expect(2) = 1e-78
Identities = 105/211 (49%), Positives = 146/211 (69%)
Frame = +3
Query: 3 RPDAVTFVGILTGFSHKGMVQEGWKYFNKMSMEYHIKPGLEHYSCMVDMLGRAGRLIEAE 182
+P+ +TFV +L+G SH G+V EG YF+ M+ ++ I P EHYSCMVD+ GRAG L EA
Sbjct: 96 KPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEAL 155
Query: 183 NLVRNMVVNPDSSIWGGLLNACKIHRNVEIAERAVAEILRLDSNTAGWYVLMSNIYAIAG 362
N + M V P++S+WG LL AC++H N+E+AERAV +++ L G YVL+SNIYA AG
Sbjct: 156 NFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAG 215
Query: 363 QWDQVAKMRMKMKEKKLTKEPGWSSIEVGGKIHSFLVCDQSHPRSKEIYAFLKDVKKRMT 542
+WD K+R MK++ + KEPG S IEV K+H F+V D SHP+ +EIY L+ + +M
Sbjct: 216 RWDDAGKVRKMMKDRSVKKEPGCSWIEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMK 275
Query: 543 LEGYVADTNCVLEKLDQELKEDILCGHSERL 635
GY+ +TN VL +++E KE IL HSE+L
Sbjct: 276 AAGYIPNTNFVLHDVEEEQKEWILGHHSEKL 306
Score = 98.6 bits (244), Expect(2) = 1e-78
Identities = 40/60 (66%), Positives = 49/60 (81%)
Frame = +2
Query: 635 GILNTMEGDVLRVMKNLRICVDCHNVTKFISRVSKREIIVRDTKRFHHFKDGMCSCGNYW 814
GI++T G +RV+KNLR+C DCH TKFISR+ REI++RDT RFHHFKDG CSCG+YW
Sbjct: 311 GIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFKDGQCSCGDYW 370
>ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|222847402|gb|EEE84949.1|
predicted protein [Populus trichocarpa]
Length = 666
Score = 221 bits (563), Expect(2) = 7e-78
Identities = 98/211 (46%), Positives = 154/211 (72%)
Frame = +3
Query: 3 RPDAVTFVGILTGFSHKGMVQEGWKYFNKMSMEYHIKPGLEHYSCMVDMLGRAGRLIEAE 182
+P+ +TF+ +L SH G ++EGW++FN MS EY+++PG+EHY CMVD+LGRAG + EA
Sbjct: 392 KPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAY 451
Query: 183 NLVRNMVVNPDSSIWGGLLNACKIHRNVEIAERAVAEILRLDSNTAGWYVLMSNIYAIAG 362
NL+++M V D +WG LL AC+IH++VE+AE + E+ +LD + G+YVL++NIYA AG
Sbjct: 452 NLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAG 511
Query: 363 QWDQVAKMRMKMKEKKLTKEPGWSSIEVGGKIHSFLVCDQSHPRSKEIYAFLKDVKKRMT 542
+W V +MR+ +K++ L K PG+S +E+ G++H FLV D+ HP+ ++IY +L+++ ++
Sbjct: 512 RWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQ 571
Query: 543 LEGYVADTNCVLEKLDQELKEDILCGHSERL 635
GYV + VL +D+E KE I+ HSE+L
Sbjct: 572 EAGYVPNMASVLHDVDEEEKEMIVRVHSEKL 602
Score = 96.7 bits (239), Expect(2) = 7e-78
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +2
Query: 635 GILNTMEGDVLRVMKNLRICVDCHNVTKFISRVSKREIIVRDTKRFHHFKDGMCSCGNYW 814
G++N++ G + V+KNLR+C DCH V K IS++ REIIVRD KRFHHFKDG+CSCG+YW
Sbjct: 607 GVMNSIPGSTIHVIKNLRVCGDCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666
>dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 220 bits (561), Expect(2) = 1e-77
Identities = 101/211 (47%), Positives = 151/211 (71%)
Frame = +3
Query: 3 RPDAVTFVGILTGFSHKGMVQEGWKYFNKMSMEYHIKPGLEHYSCMVDMLGRAGRLIEAE 182
RP+ +TFV +L SH G+ EGW++FN M + ++PGLEHY CMVD+LGRAG L +A
Sbjct: 385 RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAY 444
Query: 183 NLVRNMVVNPDSSIWGGLLNACKIHRNVEIAERAVAEILRLDSNTAGWYVLMSNIYAIAG 362
+L++ M + PDS IW LL AC+IH+NVE+AE +VA + LDS+ G+Y+L+S+IYA AG
Sbjct: 445 DLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAG 504
Query: 363 QWDQVAKMRMKMKEKKLTKEPGWSSIEVGGKIHSFLVCDQSHPRSKEIYAFLKDVKKRMT 542
+W V ++RM MK + L K PG+S +E+ G++H FL+ D+ HP+ ++IY FL ++ +++
Sbjct: 505 RWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLL 564
Query: 543 LEGYVADTNCVLEKLDQELKEDILCGHSERL 635
GYV++T+ V +D+E KE L HSE+L
Sbjct: 565 EAGYVSNTSSVCHDVDEEEKEMTLRVHSEKL 595
Score = 96.7 bits (239), Expect(2) = 1e-77
Identities = 39/60 (65%), Positives = 48/60 (80%)
Frame = +2
Query: 635 GILNTMEGDVLRVMKNLRICVDCHNVTKFISRVSKREIIVRDTKRFHHFKDGMCSCGNYW 814
GI+NT+ G + V+KNLR+C DCHNV K IS++ RE +VRD KRFHHFKDG CSCG+YW
Sbjct: 600 GIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
>ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like
[Arabidopsis thaliana] gi|332643694|gb|AEE77215.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 659
Score = 220 bits (561), Expect(2) = 1e-77
Identities = 101/211 (47%), Positives = 151/211 (71%)
Frame = +3
Query: 3 RPDAVTFVGILTGFSHKGMVQEGWKYFNKMSMEYHIKPGLEHYSCMVDMLGRAGRLIEAE 182
RP+ +TFV +L SH G+ EGW++FN M + ++PGLEHY CMVD+LGRAG L +A
Sbjct: 385 RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAY 444
Query: 183 NLVRNMVVNPDSSIWGGLLNACKIHRNVEIAERAVAEILRLDSNTAGWYVLMSNIYAIAG 362
+L++ M + PDS IW LL AC+IH+NVE+AE +VA + LDS+ G+Y+L+S+IYA AG
Sbjct: 445 DLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAG 504
Query: 363 QWDQVAKMRMKMKEKKLTKEPGWSSIEVGGKIHSFLVCDQSHPRSKEIYAFLKDVKKRMT 542
+W V ++RM MK + L K PG+S +E+ G++H FL+ D+ HP+ ++IY FL ++ +++
Sbjct: 505 RWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLL 564
Query: 543 LEGYVADTNCVLEKLDQELKEDILCGHSERL 635
GYV++T+ V +D+E KE L HSE+L
Sbjct: 565 EAGYVSNTSSVCHDVDEEEKEMTLRVHSEKL 595
Score = 96.7 bits (239), Expect(2) = 1e-77
Identities = 39/60 (65%), Positives = 48/60 (80%)
Frame = +2
Query: 635 GILNTMEGDVLRVMKNLRICVDCHNVTKFISRVSKREIIVRDTKRFHHFKDGMCSCGNYW 814
GI+NT+ G + V+KNLR+C DCHNV K IS++ RE +VRD KRFHHFKDG CSCG+YW
Sbjct: 600 GIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659