BLASTX nr result

ID: Panax21_contig00029206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029206
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22285.3| unnamed protein product [Vitis vinifera]              182   9e-44
ref|XP_002305375.1| predicted protein [Populus trichocarpa] gi|1...   181   1e-43
ref|XP_002324093.1| predicted protein [Populus trichocarpa] gi|2...   178   1e-42
ref|XP_002284262.2| PREDICTED: membrane-anchored ubiquitin-fold ...   168   2e-41
ref|XP_003531843.1| PREDICTED: membrane-anchored ubiquitin-fold ...   171   1e-40

>emb|CBI22285.3| unnamed protein product [Vitis vinifera]
          Length = 117

 Score =  182 bits (461), Expect = 9e-44
 Identities = 88/117 (75%), Positives = 96/117 (82%)
 Frame = +1

Query: 175 MSGVQDQLEIKFRLTDGSDIGPKSFPASASVANLKESILSHWPKESENGPRTVKDVKLIS 354
           MSGVQDQLEIKFRLTDGSDIGPKSF A+ SVA LKE++L+ WPKE ENGP+TVKDVKLIS
Sbjct: 1   MSGVQDQLEIKFRLTDGSDIGPKSFSAATSVATLKENVLAQWPKEKENGPKTVKDVKLIS 60

Query: 355 AGRILENNRTVGECSSPLCDVPGGVTTMHVVVQXXXXXXXXXXXXXXXQNKCVCVIL 525
           AG+ILENNRT+GEC SPLCD+PGGVTTMHVVVQ               QNKCVCVIL
Sbjct: 61  AGKILENNRTIGECRSPLCDIPGGVTTMHVVVQPPSSDKEKKVASQPKQNKCVCVIL 117


>ref|XP_002305375.1| predicted protein [Populus trichocarpa] gi|118489660|gb|ABK96631.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222848339|gb|EEE85886.1| predicted protein [Populus
           trichocarpa]
          Length = 117

 Score =  181 bits (459), Expect = 1e-43
 Identities = 87/117 (74%), Positives = 96/117 (82%)
 Frame = +1

Query: 175 MSGVQDQLEIKFRLTDGSDIGPKSFPASASVANLKESILSHWPKESENGPRTVKDVKLIS 354
           M+GVQDQLEIKFRL DGSDIGPK+FPA+ SVA LKE+IL+HWPKE ENGPRT+KDVKLIS
Sbjct: 1   MAGVQDQLEIKFRLADGSDIGPKTFPAATSVATLKENILAHWPKEKENGPRTLKDVKLIS 60

Query: 355 AGRILENNRTVGECSSPLCDVPGGVTTMHVVVQXXXXXXXXXXXXXXXQNKCVCVIL 525
           AG+ILENNRTVGEC SPLCD+PGGVTTMHVVV                Q+KCVCVIL
Sbjct: 61  AGKILENNRTVGECQSPLCDIPGGVTTMHVVVHPSSVEKEKKAANQPRQSKCVCVIL 117


>ref|XP_002324093.1| predicted protein [Populus trichocarpa] gi|222867095|gb|EEF04226.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  178 bits (451), Expect = 1e-42
 Identities = 87/117 (74%), Positives = 96/117 (82%)
 Frame = +1

Query: 175 MSGVQDQLEIKFRLTDGSDIGPKSFPASASVANLKESILSHWPKESENGPRTVKDVKLIS 354
           M+ VQDQLEIKFRLTDGSDIGPK+FPA+ SVA LKE+IL+ WPKE ENGPRT+KDVKLIS
Sbjct: 1   MAVVQDQLEIKFRLTDGSDIGPKTFPAATSVATLKENILAQWPKEKENGPRTLKDVKLIS 60

Query: 355 AGRILENNRTVGECSSPLCDVPGGVTTMHVVVQXXXXXXXXXXXXXXXQNKCVCVIL 525
           AG+ILENNRTVGEC SPLCD+PGGVTTMHVVVQ               Q+KCVCVIL
Sbjct: 61  AGKILENNRTVGECRSPLCDIPGGVTTMHVVVQPSSVEKGKKGANQAKQSKCVCVIL 117


>ref|XP_002284262.2| PREDICTED: membrane-anchored ubiquitin-fold protein 2 [Vitis
           vinifera]
          Length = 132

 Score =  168 bits (426), Expect(2) = 2e-41
 Identities = 79/93 (84%), Positives = 87/93 (93%)
 Frame = +1

Query: 175 MSGVQDQLEIKFRLTDGSDIGPKSFPASASVANLKESILSHWPKESENGPRTVKDVKLIS 354
           MSGVQDQLEIKFRLTDGSDIGPKSF A+ SVA LKE++L+ WPKE ENGP+TVKDVKLIS
Sbjct: 1   MSGVQDQLEIKFRLTDGSDIGPKSFSAATSVATLKENVLAQWPKEKENGPKTVKDVKLIS 60

Query: 355 AGRILENNRTVGECSSPLCDVPGGVTTMHVVVQ 453
           AG+ILENNRT+GEC SPLCD+PGGVTTMHVVVQ
Sbjct: 61  AGKILENNRTIGECRSPLCDIPGGVTTMHVVVQ 93



 Score = 27.3 bits (59), Expect(2) = 2e-41
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 498 AEQVCLCYIIKCSCKSSKHIVC 563
           AEQ+CLCY + C+ +   +I C
Sbjct: 110 AEQMCLCYTMICNFQGWDYIQC 131


>ref|XP_003531843.1| PREDICTED: membrane-anchored ubiquitin-fold protein 2-like [Glycine
           max]
          Length = 117

 Score =  171 bits (434), Expect = 1e-40
 Identities = 82/117 (70%), Positives = 92/117 (78%)
 Frame = +1

Query: 175 MSGVQDQLEIKFRLTDGSDIGPKSFPASASVANLKESILSHWPKESENGPRTVKDVKLIS 354
           M+G QDQ EIKFRLTDGSDIGPKSFPA+ S+A LKES+L+ WPK+ ENGP+T+KDVKLIS
Sbjct: 1   MAGNQDQFEIKFRLTDGSDIGPKSFPAATSIATLKESVLAQWPKDKENGPKTIKDVKLIS 60

Query: 355 AGRILENNRTVGECSSPLCDVPGGVTTMHVVVQXXXXXXXXXXXXXXXQNKCVCVIL 525
           AG+ILENNRTVGEC SPLCD P  VTTMHVVVQ               QNKC+CVIL
Sbjct: 61  AGKILENNRTVGECQSPLCDTPDTVTTMHVVVQHPATEKEKKAANKATQNKCMCVIL 117


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