BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029155
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   171   1e-42
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   171   3e-42
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   170   9e-41
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   164   2e-40
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   166   3e-40

>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score =  171 bits (433), Expect(2) = 1e-42
 Identities = 86/192 (44%), Positives = 119/192 (61%)
 Frame = +2

Query: 83  MNDYRPISYCNTTYNCISKIMAGRLKRVMPNIISPS*AAFVPGRRIGDNILIAQELFRGY 262
           + DYRPIS CN  Y  ISKI+A RLKR++P  I  + +AFV  R + +N+L+A EL + Y
Sbjct: 247 IKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDY 306

Query: 263 KRAFGPHRCALKVDLRKSFDYISWGXXXXXXXXXXXXXXXXYWIRACIMSTWFSMKVNGE 442
            +     RCA+K+D+ K+FD + W                 +WI  C+ +  FS++VNGE
Sbjct: 307 HKDSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGE 366

Query: 443 LCEYFKGAKGLRQGSPLSPYLFVIAMEVLSIIVHKNTKAPVFRHHWRTKQINLTHLCFVD 622
           L  YF+ A+GLRQG  LSPYLFVI+M+VLS ++ K   A  F +H R K + LTHLCF D
Sbjct: 367 LAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFAD 426

Query: 623 DLLLFCYGDRKS 658
           DL++   G  +S
Sbjct: 427 DLMILTDGKIRS 438



 Score = 28.5 bits (62), Expect(2) = 1e-42
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 3   FFQ*GCLLRGINSTAITLIPKVK 71
           FF  G L +G+NST + LIPK K
Sbjct: 220 FFAKGFLPKGVNSTILALIPKKK 242


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  171 bits (434), Expect(2) = 3e-42
 Identities = 88/201 (43%), Positives = 122/201 (60%)
 Frame = +2

Query: 71   NPSSMNDYRPISYCNTTYNCISKIMAGRLKRVMPNIISPS*AAFVPGRRIGDNILIAQEL 250
            N   + ++RPIS CN  Y  ISK++A RL+ ++P  ISPS +AFV GR + +N+L+A EL
Sbjct: 515  NADRITEFRPISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATEL 574

Query: 251  FRGYKRAFGPHRCALKVDLRKSFDYISWGXXXXXXXXXXXXXXXXYWIRACIMSTWFSMK 430
             +G+ +A    R  LKVDLRK+FD + WG                 WI+ CI ST FS+ 
Sbjct: 575  VQGFGQANISSRGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSIN 634

Query: 431  VNGELCEYFKGAKGLRQGSPLSPYLFVIAMEVLSIIVHKNTKAPVFRHHWRTKQINLTHL 610
            V+G LC YFKG+KGLRQG PLSP LFVIAME+LS ++          +H +  ++ ++ L
Sbjct: 635  VSGSLCGYFKGSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSL 694

Query: 611  CFVDDLLLFCYGDRKSTATLK 673
             F DDL++F  G   S   +K
Sbjct: 695  AFADDLMIFYDGKASSLRGIK 715



 Score = 26.6 bits (57), Expect(2) = 3e-42
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +3

Query: 3   FFQ*GCLLRGINSTAITLIPK 65
           FF+ G LL   NSTA+T++PK
Sbjct: 492 FFRSGRLLGQWNSTAVTMVPK 512


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  170 bits (430), Expect(2) = 9e-41
 Identities = 83/194 (42%), Positives = 118/194 (60%)
 Frame = +2

Query: 77   SSMNDYRPISYCNTTYNCISKIMAGRLKRVMPNIISPS*AAFVPGRRIGDNILIAQELFR 256
            S M DYRPIS CN  Y  +SK+MA RLK ++P  I+P+ +AF+  R + +N+L+A EL +
Sbjct: 671  SGMKDYRPISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLMMENLLLASELVK 730

Query: 257  GYKRAFGPHRCALKVDLRKSFDYISWGXXXXXXXXXXXXXXXXYWIRACIMSTWFSMKVN 436
             Y +     R ALK+D+ K+FD++ W                 +WI  CI +  FS++VN
Sbjct: 731  DYHKESISSRSALKIDISKAFDFVQWPFLINVLKAIHLPEMFIHWIELCIGTASFSVQVN 790

Query: 437  GELCEYFKGAKGLRQGSPLSPYLFVIAMEVLSIIVHKNTKAPVFRHHWRTKQINLTHLCF 616
            GEL  +F+  +GLRQG  LSPYL+VI M VLS ++ K        +H R + +NLTHLCF
Sbjct: 791  GELSGFFRSERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHLCF 850

Query: 617  VDDLLLFCYGDRKS 658
             DD+++F  G  KS
Sbjct: 851  ADDIMVFSDGTSKS 864



 Score = 23.1 bits (48), Expect(2) = 9e-41
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 3   FFQ*GCLLRGINSTAITLIPK 65
           FF  G L +GIN+T + LI K
Sbjct: 646 FFLKGFLPKGINTTILALISK 666


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  164 bits (414), Expect(2) = 2e-40
 Identities = 85/192 (44%), Positives = 117/192 (60%)
 Frame = +2

Query: 83   MNDYRPISYCNTTYNCISKIMAGRLKRVMPNIISPS*AAFVPGRRIGDNILIAQELFRGY 262
            M DYRPIS CN  Y  ISKI+A RLK V+P  I+ + +AFV  R + +N+L+A EL + Y
Sbjct: 526  MKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDY 585

Query: 263  KRAFGPHRCALKVDLRKSFDYISWGXXXXXXXXXXXXXXXXYWIRACIMSTWFSMKVNGE 442
             +     RCA+K+D+ K+FD + W                 +WI  CI +  FS++VNGE
Sbjct: 586  HKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGE 645

Query: 443  LCEYFKGAKGLRQGSPLSPYLFVIAMEVLSIIVHKNTKAPVFRHHWRTKQINLTHLCFVD 622
            L  YF+ ++GLRQG  LSPYLFVI M+VLS ++ K   A  F +H + K + LTHL F D
Sbjct: 646  LAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFAD 705

Query: 623  DLLLFCYGDRKS 658
            DL++   G  +S
Sbjct: 706  DLMVLSDGKIRS 717



 Score = 27.7 bits (60), Expect(2) = 2e-40
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +3

Query: 3   FFQ*GCLLRGINSTAITLIPK 65
           FF  G L +GINST + LIPK
Sbjct: 499 FFTKGFLPKGINSTILALIPK 519


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score =  166 bits (419), Expect(2) = 3e-40
 Identities = 83/196 (42%), Positives = 117/196 (59%)
 Frame = +2

Query: 71   NPSSMNDYRPISYCNTTYNCISKIMAGRLKRVMPNIISPS*AAFVPGRRIGDNILIAQEL 250
            N S M D+RPIS  NT Y  I+K++  RLK+++  +ISPS +AF+PGR + +N+L+A E+
Sbjct: 517  NSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEI 576

Query: 251  FRGYKRAFGPHRCALKVDLRKSFDYISWGXXXXXXXXXXXXXXXXYWIRACIMSTWFSMK 430
              GY       R  LKVDLRK+FD + W                  WI  CI + +FS+ 
Sbjct: 577  VHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVM 636

Query: 431  VNGELCEYFKGAKGLRQGSPLSPYLFVIAMEVLSIIVHKNTKAPVFRHHWRTKQINLTHL 610
            VNG    +FK  KGLRQG PLSPYLFV+AMEV S ++     A   ++H +T  ++++HL
Sbjct: 637  VNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIQYHPKTADLSISHL 696

Query: 611  CFVDDLLLFCYGDRKS 658
             F DD+++F  G   S
Sbjct: 697  MFADDVMVFFDGGSSS 712



 Score = 25.4 bits (54), Expect(2) = 3e-40
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   FFQ*GCLLRGINSTAITLIPKV 68
           FF+ G LL+  N+T + LIPK+
Sbjct: 494 FFRSGQLLKQWNATTLVLIPKI 515