BLASTX nr result
ID: Panax21_contig00029107
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00029107
(706 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-contain... 112 3e-37
ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain... 87 3e-24
gb|EEE56485.1| hypothetical protein OsJ_05715 [Oryza sativa Japo... 88 2e-23
ref|NP_001046163.1| Os02g0192400 [Oryza sativa Japonica Group] g... 88 2e-23
ref|XP_002451700.1| hypothetical protein SORBIDRAFT_04g006240 [S... 90 9e-23
>ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
vinifera]
Length = 2060
Score = 112 bits (280), Expect(2) = 3e-37
Identities = 58/125 (46%), Positives = 83/125 (66%), Gaps = 4/125 (3%)
Frame = +1
Query: 328 TNAVTALEKKLGPYLQVEANDIPKQQKNKAEAIFQGRMYRCECLEPLWPSKHHCLSCHQT 507
T A T LEKK GP +++EA DIPK++ + + RM+RCECLEP+WPS+ HCL+CHQ+
Sbjct: 1610 TRAGTILEKKYGPCMELEATDIPKKRCPNSLVRCEQRMHRCECLEPIWPSRKHCLTCHQS 1669
Query: 508 FSTFEDIDGHNNGTFSTSLPIPES---NKDYSKHK-RIRTETLLEKSCDLRIVKASKNEK 675
FST E++ GH++ S+ E+ N + K K + T+ L E S DL ++ ASK+EK
Sbjct: 1670 FSTSEELKGHDDRICSSGASASENSMVNDESGKGKMMMNTDALQEHSDDLGMIGASKSEK 1729
Query: 676 HKTRS 690
H+T S
Sbjct: 1730 HETVS 1734
Score = 69.3 bits (168), Expect(2) = 3e-37
Identities = 38/79 (48%), Positives = 47/79 (59%)
Frame = +2
Query: 17 GIEIPSSSRGISFSNMYPTEQIMDTPISSSWTCYQSDVEIEELVG*LTDNDARERELKES 196
G E SSR + SN + +Q P+S W QS+ EIEEL+ L DN+ REREL ES
Sbjct: 1510 GREKKFSSREFNISNRHMHDQEYSIPMSFPWVSCQSNDEIEELIQWLRDNEPRERELLES 1569
Query: 197 ILYWHRNKCKDSNDARKII 253
IL W R K KDSN A+ +
Sbjct: 1570 ILQWQRTKYKDSNKAKSYV 1588
>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
vinifera]
Length = 2164
Score = 86.7 bits (213), Expect(2) = 3e-24
Identities = 38/92 (41%), Positives = 57/92 (61%)
Frame = +1
Query: 325 VTNAVTALEKKLGPYLQVEANDIPKQQKNKAEAIFQGRMYRCECLEPLWPSKHHCLSCHQ 504
+T A L KK GP+ + E D K+ +++ + +MYRCECLEP+W S+HHC SCH+
Sbjct: 1740 LTKAGILLGKKYGPWFEPEIADSSKKWDLRSKVTNESKMYRCECLEPIWSSRHHCPSCHR 1799
Query: 505 TFSTFEDIDGHNNGTFSTSLPIPESNKDYSKH 600
TF T ++ HN+G+ + P E +K+ S H
Sbjct: 1800 TFFTDIQLEEHNDGSCRSGPPTSEKSKENSSH 1831
Score = 51.2 bits (121), Expect(2) = 3e-24
Identities = 29/72 (40%), Positives = 41/72 (56%)
Frame = +2
Query: 14 LGIEIPSSSRGISFSNMYPTEQIMDTPISSSWTCYQSDVEIEELVG*LTDNDARERELKE 193
L ++I S+ G + S + I S W YQS EI+ L+G L D D RE+ELKE
Sbjct: 1638 LSMDILSTLGGSNASCPFLYRPNASISICSQWVSYQSGEEIDALIGWLKDADPREKELKE 1697
Query: 194 SILYWHRNKCKD 229
SIL+ H+ + +D
Sbjct: 1698 SILHLHKLRFRD 1709
>gb|EEE56485.1| hypothetical protein OsJ_05715 [Oryza sativa Japonica Group]
Length = 1949
Score = 87.8 bits (216), Expect(2) = 2e-23
Identities = 42/121 (34%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Frame = +1
Query: 322 PVTNAVTALEKKLGPYLQVEANDIPKQQKNKAEAIFQGRMYRCECLEPLWPSKHHCLSCH 501
P T A LE+K G L + +D+PK++ K + + R YRC+CLEP+WPS++HCL+CH
Sbjct: 1551 PNTKAAVILEQKYGLQLDQDTSDLPKKRGKKIKLSSEDRTYRCDCLEPVWPSRYHCLTCH 1610
Query: 502 QTFSTFEDIDGHNNGTFSTSLPIPESNK--DYSKHKRIRTETLLEKSCDL-RIVKASKNE 672
+T+ + +GHN+G S P+ ++ D K K +++T + S + +++ S +
Sbjct: 1611 ETYLISTEFEGHNDGKCSKIHQSPDESRENDEPKVKVTKSDTKEKDSLECSSVIEPSSDR 1670
Query: 673 K 675
K
Sbjct: 1671 K 1671
Score = 47.4 bits (111), Expect(2) = 2e-23
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +2
Query: 17 GIEIPSSSRGISFSNMYPTEQI-MDTPISSSWTCYQSDVEIEELVG*LTDNDARERELKE 193
G + R IS N YP S+S Y+SD EI+ L+ L D D RE+ELK+
Sbjct: 1458 GSMLKPKERDISMVNSYPPSAFDCKGWNSASIFIYESDEEIQCLLDWLRDYDPREKELKD 1517
Query: 194 SILYWHRNKCKDSN 235
SIL W R+ C S+
Sbjct: 1518 SILQWQRHFCHQSS 1531
>ref|NP_001046163.1| Os02g0192400 [Oryza sativa Japonica Group]
gi|46389826|dbj|BAD15389.1| PHD finger-like protein
[Oryza sativa Japonica Group]
gi|50726413|dbj|BAD34024.1| PHD finger-like protein
[Oryza sativa Japonica Group]
gi|113535694|dbj|BAF08077.1| Os02g0192400 [Oryza sativa
Japonica Group]
Length = 929
Score = 87.8 bits (216), Expect(2) = 2e-23
Identities = 42/121 (34%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Frame = +1
Query: 322 PVTNAVTALEKKLGPYLQVEANDIPKQQKNKAEAIFQGRMYRCECLEPLWPSKHHCLSCH 501
P T A LE+K G L + +D+PK++ K + + R YRC+CLEP+WPS++HCL+CH
Sbjct: 531 PNTKAAVILEQKYGLQLDQDTSDLPKKRGKKIKLSSEDRTYRCDCLEPVWPSRYHCLTCH 590
Query: 502 QTFSTFEDIDGHNNGTFSTSLPIPESNK--DYSKHKRIRTETLLEKSCDL-RIVKASKNE 672
+T+ + +GHN+G S P+ ++ D K K +++T + S + +++ S +
Sbjct: 591 ETYLISTEFEGHNDGKCSKIHQSPDESRENDEPKVKVTKSDTKEKDSLECSSVIEPSSDR 650
Query: 673 K 675
K
Sbjct: 651 K 651
Score = 47.4 bits (111), Expect(2) = 2e-23
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +2
Query: 17 GIEIPSSSRGISFSNMYPTEQI-MDTPISSSWTCYQSDVEIEELVG*LTDNDARERELKE 193
G + R IS N YP S+S Y+SD EI+ L+ L D D RE+ELK+
Sbjct: 438 GSMLKPKERDISMVNSYPPSAFDCKGWNSASIFIYESDEEIQCLLDWLRDYDPREKELKD 497
Query: 194 SILYWHRNKCKDSN 235
SIL W R+ C S+
Sbjct: 498 SILQWQRHFCHQSS 511
>ref|XP_002451700.1| hypothetical protein SORBIDRAFT_04g006240 [Sorghum bicolor]
gi|241931531|gb|EES04676.1| hypothetical protein
SORBIDRAFT_04g006240 [Sorghum bicolor]
Length = 1872
Score = 89.7 bits (221), Expect(2) = 9e-23
Identities = 40/117 (34%), Positives = 71/117 (60%)
Frame = +1
Query: 322 PVTNAVTALEKKLGPYLQVEANDIPKQQKNKAEAIFQGRMYRCECLEPLWPSKHHCLSCH 501
P T A LE+K GP L + +++ K++ +K+++ + R+YRC+CLEPL P +HHCL+CH
Sbjct: 1484 PNTKAFIVLEQKYGPQLDQDTSELSKRRGSKSKSGSEERVYRCDCLEPLLPFRHHCLNCH 1543
Query: 502 QTFSTFEDIDGHNNGTFSTSLPIPESNKDYSKHKRIRTETLLEKSCDLRIVKASKNE 672
+T+ T + +GHN ++S P +K+ + K T+ ++ +C + + K E
Sbjct: 1544 ETYLTLTEYEGHNGVKCNSSNDCPTESKENDEPKLKGTKDPVDHNCSIEPSNSGKLE 1600
Score = 43.1 bits (100), Expect(2) = 9e-23
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +2
Query: 98 SSSWTCYQSDVEIEELVG*LTDNDARERELKESILYWHRN 217
S+S Y+SD EI+ LV L D D RE++LK+SIL+W ++
Sbjct: 1418 SASLVMYESDEEIKSLVDWLRDIDPREKDLKDSILHWQKS 1457