BLASTX nr result

ID: Panax21_contig00029101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029101
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80244.1| hypothetical protein VITISV_031022 [Vitis vinifera]   169   3e-40
ref|XP_002512607.1| hypothetical protein RCOM_1437240 [Ricinus c...   168   6e-40
emb|CBI17677.3| unnamed protein product [Vitis vinifera]              166   2e-39
gb|AEJ72573.1| putative chromatin remodeling complex subunit [Ma...   145   5e-33
gb|ABD28567.1| Homeodomain-like [Medicago truncatula]                 130   2e-28

>emb|CAN80244.1| hypothetical protein VITISV_031022 [Vitis vinifera]
          Length = 627

 Score =  169 bits (428), Expect = 3e-40
 Identities = 98/203 (48%), Positives = 125/203 (61%), Gaps = 7/203 (3%)
 Frame = +2

Query: 17  SEEERTFLLQNDRTWPKFTAMRSELFLGLSLPPEPKYCHSPNSTVS---PWYNFGIKTRE 187
           S E  +  L  D    K T  RS  FLGLSLP +PK     + +     P  N  IKT E
Sbjct: 293 SRERTSLRLGGDTVQSKQTPTRSPHFLGLSLPTDPKNAGRDSKSCPATFPLPNLSIKTME 352

Query: 188 FIQDAGLQPFSDPTSALLRHKMMLDNIVTRARALKGKRSCFLDKFELPTS-WSEEELDFL 364
            I DA  +  +   S LLRH++ML++I  RARALKG+ SC  DKFE  T+ W EEELDFL
Sbjct: 353 MIPDAAAKSSTSQMS-LLRHRLMLESIEARARALKGRGSCS-DKFEQHTTLWPEEELDFL 410

Query: 365 WIGVRRHGRGNWDAMLRDPRLHFLSWRSPRELAQRWDDEQTKLMNGVPVFHASHLRSPYI 544
           WIGVRRHGR NWDAMLRDP+LHF  WR   +LA++W+ EQ+KL+NG+        + P +
Sbjct: 411 WIGVRRHGRDNWDAMLRDPKLHFSPWRVASDLAEQWEVEQSKLLNGMLESQVKLRKPPDV 470

Query: 545 DMDDS---LHSKTGIQMESLVDE 604
             + +   LH +TGI  E+L+DE
Sbjct: 471 SSNRNSGFLHPRTGIHRENLMDE 493


>ref|XP_002512607.1| hypothetical protein RCOM_1437240 [Ricinus communis]
            gi|223548568|gb|EEF50059.1| hypothetical protein
            RCOM_1437240 [Ricinus communis]
          Length = 930

 Score =  168 bits (426), Expect = 6e-40
 Identities = 98/187 (52%), Positives = 121/187 (64%), Gaps = 9/187 (4%)
 Frame = +2

Query: 71   TAMRSELFLGLSLPPEPKY--CHSPNSTVSPWYNFGIKTREFIQDAGLQPFSDPTSALLR 244
            T+  S L LGLSLP E     C    S  SP +NF  K R+F QDA  Q  S+  ++LLR
Sbjct: 548  TSCASLLDLGLSLPTESDMGNCSKKCSLKSPMWNFDCKIRDFFQDAVHQSSSNQATSLLR 607

Query: 245  HKMMLDNIVTRARALKGKRSCFLDKFELPTS-WSEEELDFLWIGVRRHGRGNWDAMLRDP 421
            HK+MLD+IV+RA AL  K  CF DKF+  T+ W EEELD LWIGVRRHGR NW AMLRDP
Sbjct: 608  HKLMLDSIVSRASALNAK-GCFQDKFKSYTTLWLEEELDSLWIGVRRHGRDNWHAMLRDP 666

Query: 422  RLHFLSWRSPRELAQRWDDEQTKLMNGVPVFHASHLRSPY---IDMDDS---LHSKTGIQ 583
            RLHF SWR+ R+LA++W++EQ KL+NG    H S   SP    I +D +   L+ K GI 
Sbjct: 667  RLHFSSWRTARDLAEQWEEEQAKLLNG----HCSQFNSPLTQDISLDHTGGFLYPKVGIW 722

Query: 584  MESLVDE 604
              + V+E
Sbjct: 723  RGNTVEE 729


>emb|CBI17677.3| unnamed protein product [Vitis vinifera]
          Length = 600

 Score =  166 bits (421), Expect = 2e-39
 Identities = 95/195 (48%), Positives = 123/195 (63%), Gaps = 7/195 (3%)
 Frame = +2

Query: 41  LQNDRTWPKFTAMRSELFLGLSLPPEPKYCHSPNSTVS---PWYNFGIKTREFIQDAGLQ 211
           + +D    K T  RS  FLGLSLP +PK     + +     P  N  IKT E I DA  +
Sbjct: 198 MASDTVQSKQTPTRSPHFLGLSLPTDPKNAGRDSKSCPATFPLPNLSIKTMEMIPDAAAK 257

Query: 212 PFSDPTSALLRHKMMLDNIVTRARALKGKRSCFLDKFELPTS-WSEEELDFLWIGVRRHG 388
             +   S LLRH++ML++I  RARALKG+ SC  DKFE  T+ W EEELDFLWIGVRRHG
Sbjct: 258 SSTSQMS-LLRHRLMLESIEARARALKGRGSCS-DKFEQHTTLWPEEELDFLWIGVRRHG 315

Query: 389 RGNWDAMLRDPRLHFLSWRSPRELAQRWDDEQTKLMNGVPVFHASHLRSPYIDMDDS--- 559
           R NWDAMLRDP+LHF  WR   +LA++W+ EQ+KL+NG+        + P +  + +   
Sbjct: 316 RDNWDAMLRDPKLHFSPWRVASDLAEQWEVEQSKLLNGMLESQVKLRKPPDVSSNRNSGF 375

Query: 560 LHSKTGIQMESLVDE 604
           LH +TGI  E+L+DE
Sbjct: 376 LHPRTGIHRENLMDE 390


>gb|AEJ72573.1| putative chromatin remodeling complex subunit [Malus x domestica]
          Length = 823

 Score =  145 bits (366), Expect = 5e-33
 Identities = 90/202 (44%), Positives = 119/202 (58%), Gaps = 7/202 (3%)
 Frame = +2

Query: 17  SEEERTFLLQNDRTWPKFTAMRSELFLGLSLPPEPKYCHSPNST---VSPWYNFGIKTRE 187
           SE  +   L      PK     S +FLGLSL  +P       +T    SP+ N  I TRE
Sbjct: 431 SERRKVLQLGGQNNQPK---QGSPMFLGLSLTEKPVLAGCAANTCFNTSPFLNSIIGTRE 487

Query: 188 FIQDAGLQPFSDPTSALLRHKMMLDNIVTRARALKGKRSCFLDKFELP--TSWSEEELDF 361
           FI+DA LQ  S   S++L+HK+M D++V++ARAL  +R  F D + +P  T WSEEELDF
Sbjct: 488 FIRDAALQSSSSRLSSVLKHKIMHDSVVSQARALN-ERGSFHDNY-MPHNTMWSEEELDF 545

Query: 362 LWIGVRRHGRGNWDAMLRDPRLHFLSWRSPRELAQRWDDEQTKLMNG--VPVFHASHLRS 535
           LW+GVRR+GR NW+AMLRDP L F  WR  R+LA+RW++EQ+KL +G  VP    ++   
Sbjct: 546 LWMGVRRYGRDNWNAMLRDPSLQFSPWRVARDLAERWEEEQSKLFSGLCVPQLGCNYFPG 605

Query: 536 PYIDMDDSLHSKTGIQMESLVD 601
           P          K GI  E+  D
Sbjct: 606 P----------KRGIWKENTTD 617


>gb|ABD28567.1| Homeodomain-like [Medicago truncatula]
          Length = 906

 Score =  130 bits (327), Expect = 2e-28
 Identities = 75/146 (51%), Positives = 94/146 (64%), Gaps = 4/146 (2%)
 Frame = +2

Query: 89  LFLGLSLPPEPKYCHSPNSTVS--PWYNFGIKTREFIQDAGLQPFSDPTSALLRHKMMLD 262
           L LGLSLP E    H     +S  P +N    TR+ +QD   Q  ++     LRHK +LD
Sbjct: 539 LSLGLSLPVE----HETRGCLSTLPLFNLTSGTRDIVQDGLCQSSTNRKPLHLRHKAVLD 594

Query: 263 NIVTRARALKGKRSCFLDKFEL-PTSWSEEELDFLWIGVRRHGRGNWDAMLRDPRLHFLS 439
           NIV++ RA   +R  F + ++  P  WSEEELDFLWIGVRRHGRGNWDAMLRDPRL F  
Sbjct: 595 NIVSKTRA-SNERGKFQENYKPHPIMWSEEELDFLWIGVRRHGRGNWDAMLRDPRLRFSP 653

Query: 440 WRSPRELAQRWDDEQTKLM-NGVPVF 514
            R P +LA+RW++EQ KL+ + VP F
Sbjct: 654 LRVPWDLAERWEEEQLKLLKDSVPHF 679


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