BLASTX nr result

ID: Panax21_contig00029083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029083
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   157   9e-37
ref|XP_003531118.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   139   3e-31
ref|XP_003524829.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-dihydro...   130   9e-29
gb|AFK41814.1| unknown [Lotus japonicus]                              125   4e-27
ref|XP_004165383.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   123   2e-26

>ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 1 [Vitis
           vinifera]
          Length = 433

 Score =  157 bits (397), Expect = 9e-37
 Identities = 76/118 (64%), Positives = 93/118 (78%), Gaps = 2/118 (1%)
 Frame = -1

Query: 348 MKCAGHILFASFSPIHSVILKNHARLSANIICGT--KSRRLYAYHQKHHQHTKPAIVVQR 175
           MK AG+ L ASF+PIHS+ILKNH RLS NI+ G   KS+   AY +KH  HTK  +V  +
Sbjct: 2   MKSAGYTLTASFNPIHSIILKNHRRLSLNILYGNSAKSKNSTAYIRKHQLHTKVVMVAGQ 61

Query: 174 NPPHWFSVAPMMEWTDNHYRTLARLISKHAWLYTEMIAAGTIIFQSENLDKFLAYTPE 1
             P WFSVAPMM+WT+NHYRTLARLISKHAWLYTEMIAA TI++Q +NLD+FL ++P+
Sbjct: 62  YLPPWFSVAPMMDWTNNHYRTLARLISKHAWLYTEMIAAETIVYQEKNLDRFLEFSPD 119


>ref|XP_003531118.1| PREDICTED: tRNA-dihydrouridine synthase A-like [Glycine max]
          Length = 430

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/118 (57%), Positives = 89/118 (75%), Gaps = 2/118 (1%)
 Frame = -1

Query: 348 MKCAGHILFASFSPIHSVILKNHARLSANIICGTK-SRRLYAYH-QKHHQHTKPAIVVQR 175
           MK AG+ L  SF+PI S ++K++ R +  I    + S RL++ H QKH  H KP +V + 
Sbjct: 2   MKLAGYSLAVSFAPISSNVVKSNKRFTVGISHRNRCSYRLFSTHAQKHQLHEKPGVVARY 61

Query: 174 NPPHWFSVAPMMEWTDNHYRTLARLISKHAWLYTEMIAAGTIIFQSENLDKFLAYTPE 1
           + P WFSVAPMM+WTD+HYRTLARLISKHAWLYTEM+AA TI+ Q +NLD+FLAY+P+
Sbjct: 62  HLPPWFSVAPMMDWTDHHYRTLARLISKHAWLYTEMLAAETIVHQKDNLDRFLAYSPD 119


>ref|XP_003524829.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-dihydrouridine synthase A-like
           [Glycine max]
          Length = 437

 Score =  130 bits (328), Expect = 9e-29
 Identities = 66/118 (55%), Positives = 85/118 (72%), Gaps = 2/118 (1%)
 Frame = -1

Query: 348 MKCAGHILFASFSPIHSVILKNHARLSANIIC-GTKSRRLYAYH-QKHHQHTKPAIVVQR 175
           MK AG+ L  SF+PI S ++K++ R +  I    T S RL++ H QK     KP +V + 
Sbjct: 2   MKLAGYSLAVSFAPISSNVVKSNGRFTLGISHRNTCSYRLFSTHAQKQQLQEKPGVVARY 61

Query: 174 NPPHWFSVAPMMEWTDNHYRTLARLISKHAWLYTEMIAAGTIIFQSENLDKFLAYTPE 1
             P WFSVAPMM+WTD+HYRTL RLISKHAWLYTEM+AA TI+ Q +NLD+FLAY+P+
Sbjct: 62  YLPPWFSVAPMMDWTDHHYRTLVRLISKHAWLYTEMLAAETIVHQKDNLDRFLAYSPD 119


>gb|AFK41814.1| unknown [Lotus japonicus]
          Length = 425

 Score =  125 bits (314), Expect = 4e-27
 Identities = 61/116 (52%), Positives = 80/116 (68%)
 Frame = -1

Query: 348 MKCAGHILFASFSPIHSVILKNHARLSANIICGTKSRRLYAYHQKHHQHTKPAIVVQRNP 169
           MK +G+ L  SFSP+ S +++N+ R        + SR   A  Q H +   P   +    
Sbjct: 2   MKFSGYSLAVSFSPVGSTVIRNNCRFHVGRNFRSSSRFFSAKQQSHDKGVLPNYYL---- 57

Query: 168 PHWFSVAPMMEWTDNHYRTLARLISKHAWLYTEMIAAGTIIFQSENLDKFLAYTPE 1
           P WFSVAPMMEWTD+HYRTLARLISKHAWLYTEM+AA TI++Q +NLD+FLA++P+
Sbjct: 58  PPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPD 113


>ref|XP_004165383.1| PREDICTED: tRNA-dihydrouridine synthase A-like [Cucumis sativus]
          Length = 431

 Score =  123 bits (308), Expect = 2e-26
 Identities = 64/118 (54%), Positives = 85/118 (72%), Gaps = 2/118 (1%)
 Frame = -1

Query: 348 MKCAGHILFASFSPIHSVILKNHARLSANIICGTKSRRLY--AYHQKHHQHTKPAIVVQR 175
           MK AG  + AS +P+ SVI  +H RLS++I+    S+ +   + +Q   Q  +  +V  R
Sbjct: 2   MKFAGCSVTASLTPVQSVIQNSHPRLSSSILQKNLSKPISWSSGNQILRQGPEAEMVAGR 61

Query: 174 NPPHWFSVAPMMEWTDNHYRTLARLISKHAWLYTEMIAAGTIIFQSENLDKFLAYTPE 1
             P WFSVAPMME TDNHYRTLARLISKHAWLYTEM+AA TI++Q +NLD+FLA++P+
Sbjct: 62  YSPPWFSVAPMMECTDNHYRTLARLISKHAWLYTEMLAAETIVYQKDNLDRFLAFSPD 119


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