BLASTX nr result

ID: Panax21_contig00029053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029053
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283124.1| PREDICTED: uncharacterized protein LOC100250...    55   5e-06
ref|XP_003632682.1| PREDICTED: uncharacterized protein LOC100853...    55   6e-06
gb|ABK92800.1| unknown [Populus trichocarpa]                           55   8e-06

>ref|XP_002283124.1| PREDICTED: uncharacterized protein LOC100250444 [Vitis vinifera]
          Length = 67

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 8/62 (12%)
 Frame = -3

Query: 342 LLKAFLLAFIVAAVSG--------QDFAPAPSPQAGAGFSLPLSTAVVGTALLFSLWALL 187
           + KAF+L F+VA  S            APAPSP AG+ FSLPLS AVV ++L+FSL A L
Sbjct: 6   IAKAFMLVFVVAIFSAAATVSALDNSPAPAPSPDAGSAFSLPLSGAVVASSLVFSLLAFL 65

Query: 186 RH 181
           ++
Sbjct: 66  KY 67


>ref|XP_003632682.1| PREDICTED: uncharacterized protein LOC100853831 [Vitis vinifera]
          Length = 67

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 8/62 (12%)
 Frame = -3

Query: 342 LLKAFLLAFIVA------AVSGQDFAPAP--SPQAGAGFSLPLSTAVVGTALLFSLWALL 187
           + KAF+L F+VA       VS QD +PAP  SP AG+ FSLPLS +V+ ++L+FSL ALL
Sbjct: 6   IAKAFVLLFVVAIFSVATTVSAQDNSPAPALSPDAGSAFSLPLSGSVIVSSLVFSLLALL 65

Query: 186 RH 181
           ++
Sbjct: 66  KY 67


>gb|ABK92800.1| unknown [Populus trichocarpa]
          Length = 68

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 10/68 (14%)
 Frame = -3

Query: 354 MATQLL--KAFLLAFIVAA---VSGQD---FAPAPSP--QAGAGFSLPLSTAVVGTALLF 205
           MA Q++  KAFLL  ++AA   VS QD    APAP+P  +AGAGFSLP+S A+VG +L+ 
Sbjct: 1   MAAQVIIPKAFLLFLLIAAFAVVSAQDSESMAPAPAPGMEAGAGFSLPVSGAMVGFSLVV 60

Query: 204 SLWALLRH 181
           SL   L+H
Sbjct: 61  SLLGFLKH 68


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