BLASTX nr result
ID: Panax21_contig00028945
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00028945
(493 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002876472.1| hypothetical protein ARALYDRAFT_486318 [Arab... 96 4e-34
ref|XP_002318802.1| predicted protein [Populus trichocarpa] gi|2... 90 6e-33
ref|XP_002283850.1| PREDICTED: ribosomal L1 domain-containing pr... 97 8e-33
emb|CAN65947.1| hypothetical protein VITISV_020727 [Vitis vinifera] 97 8e-33
emb|CBI31756.3| unnamed protein product [Vitis vinifera] 97 8e-33
>ref|XP_002876472.1| hypothetical protein ARALYDRAFT_486318 [Arabidopsis lyrata subsp.
lyrata] gi|297322310|gb|EFH52731.1| hypothetical protein
ARALYDRAFT_486318 [Arabidopsis lyrata subsp. lyrata]
Length = 422
Score = 95.9 bits (237), Expect(2) = 4e-34
Identities = 49/123 (39%), Positives = 66/123 (53%)
Frame = +1
Query: 124 FFADKRIIPYXXXXXXXXXXXXXXXXXSVDLGHKNWKEQXXXXXXXXXXXXXXXXXXXXX 303
FFAD+RIIP ++DL HKNWK+Q
Sbjct: 153 FFADRRIIPLLPRVIGKKFFTSKKIPVAIDLKHKNWKQQ--------------------- 191
Query: 304 XXXXKEQIERGCSSALLFMNAGTCSIVRVGKVSMEIGEIVENVVEAINGVVEFVPNKWEG 483
IE+ C SA+ F+ GTCS+++VGK+SME+ EI+ENV+ +NGVVE +PNKW+
Sbjct: 192 -------IEKACGSAMFFIRTGTCSVIKVGKLSMELNEIIENVMATLNGVVELLPNKWKY 244
Query: 484 VRS 492
VRS
Sbjct: 245 VRS 247
Score = 73.9 bits (180), Expect(2) = 4e-34
Identities = 32/40 (80%), Positives = 38/40 (95%)
Frame = +3
Query: 9 KKVKSENIPLSKVLKFTKLKTDYKPFEAKRKLCDSYDLFF 128
KK+KSENIP++KV+K +KLKTDYK FEAKRKLCDSYD+FF
Sbjct: 115 KKIKSENIPITKVIKLSKLKTDYKAFEAKRKLCDSYDMFF 154
>ref|XP_002318802.1| predicted protein [Populus trichocarpa] gi|222859475|gb|EEE97022.1|
predicted protein [Populus trichocarpa]
Length = 249
Score = 89.7 bits (221), Expect(2) = 6e-33
Identities = 47/123 (38%), Positives = 63/123 (51%)
Frame = +1
Query: 124 FFADKRIIPYXXXXXXXXXXXXXXXXXSVDLGHKNWKEQXXXXXXXXXXXXXXXXXXXXX 303
FFADKR++P ++DL H+NWKEQ
Sbjct: 138 FFADKRVVPLLPKMLGKQFFKKKKIPMTLDLKHQNWKEQ--------------------- 176
Query: 304 XXXXKEQIERGCSSALLFMNAGTCSIVRVGKVSMEIGEIVENVVEAINGVVEFVPNKWEG 483
I++ C SALLF+ GTCS+V+VG++SM EI +NV+ AING+ E VP KW G
Sbjct: 177 -------IDKACGSALLFLRTGTCSVVKVGRISMSREEISKNVMAAINGIAEIVPRKWGG 229
Query: 484 VRS 492
+RS
Sbjct: 230 IRS 232
Score = 76.3 bits (186), Expect(2) = 6e-33
Identities = 31/42 (73%), Positives = 41/42 (97%)
Frame = +3
Query: 3 AKKKVKSENIPLSKVLKFTKLKTDYKPFEAKRKLCDSYDLFF 128
AKKK++++NIP+SK++K +KLKTDY+PFEAKRKLCDSYD+FF
Sbjct: 98 AKKKIQNDNIPISKIIKISKLKTDYRPFEAKRKLCDSYDMFF 139
>ref|XP_002283850.1| PREDICTED: ribosomal L1 domain-containing protein 1-like [Vitis
vinifera]
Length = 394
Score = 96.7 bits (239), Expect(2) = 8e-33
Identities = 56/123 (45%), Positives = 65/123 (52%)
Frame = +1
Query: 124 FFADKRIIPYXXXXXXXXXXXXXXXXXSVDLGHKNWKEQXXXXXXXXXXXXXXXXXXXXX 303
F ADKRI+P +VDLGHKNWKEQ
Sbjct: 134 FLADKRIVPLLPKLLGKHFFKKRKIPVAVDLGHKNWKEQ--------------------- 172
Query: 304 XXXXKEQIERGCSSALLFMNAGTCSIVRVGKVSMEIGEIVENVVEAINGVVEFVPNKWEG 483
I+R C SALL++ GTCS+VRVGK+SME +IVENVV AI+GVVE VP K G
Sbjct: 173 -------IDRACGSALLYLRTGTCSVVRVGKLSMEKEQIVENVVAAIDGVVELVPKKLAG 225
Query: 484 VRS 492
VRS
Sbjct: 226 VRS 228
Score = 68.9 bits (167), Expect(2) = 8e-33
Identities = 31/41 (75%), Positives = 37/41 (90%)
Frame = +3
Query: 3 AKKKVKSENIPLSKVLKFTKLKTDYKPFEAKRKLCDSYDLF 125
AK KVKSENIP+SKVL +KLK++++PFEAKRKLCDSYD F
Sbjct: 94 AKTKVKSENIPVSKVLSLSKLKSNFRPFEAKRKLCDSYDFF 134
>emb|CAN65947.1| hypothetical protein VITISV_020727 [Vitis vinifera]
Length = 394
Score = 96.7 bits (239), Expect(2) = 8e-33
Identities = 56/123 (45%), Positives = 65/123 (52%)
Frame = +1
Query: 124 FFADKRIIPYXXXXXXXXXXXXXXXXXSVDLGHKNWKEQXXXXXXXXXXXXXXXXXXXXX 303
F ADKRI+P +VDLGHKNWKEQ
Sbjct: 134 FLADKRIVPLLPKLLGKHFFKKRKIPVAVDLGHKNWKEQ--------------------- 172
Query: 304 XXXXKEQIERGCSSALLFMNAGTCSIVRVGKVSMEIGEIVENVVEAINGVVEFVPNKWEG 483
I+R C SALL++ GTCS+VRVGK+SME +IVENVV AI+GVVE VP K G
Sbjct: 173 -------IDRACGSALLYLRTGTCSVVRVGKLSMEKEQIVENVVAAIDGVVELVPKKLAG 225
Query: 484 VRS 492
VRS
Sbjct: 226 VRS 228
Score = 68.9 bits (167), Expect(2) = 8e-33
Identities = 31/41 (75%), Positives = 37/41 (90%)
Frame = +3
Query: 3 AKKKVKSENIPLSKVLKFTKLKTDYKPFEAKRKLCDSYDLF 125
AK KVKSENIP+SKVL +KLK++++PFEAKRKLCDSYD F
Sbjct: 94 AKTKVKSENIPVSKVLSLSKLKSNFRPFEAKRKLCDSYDFF 134
>emb|CBI31756.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 96.7 bits (239), Expect(2) = 8e-33
Identities = 56/123 (45%), Positives = 65/123 (52%)
Frame = +1
Query: 124 FFADKRIIPYXXXXXXXXXXXXXXXXXSVDLGHKNWKEQXXXXXXXXXXXXXXXXXXXXX 303
F ADKRI+P +VDLGHKNWKEQ
Sbjct: 150 FLADKRIVPLLPKLLGKHFFKKRKIPVAVDLGHKNWKEQ--------------------- 188
Query: 304 XXXXKEQIERGCSSALLFMNAGTCSIVRVGKVSMEIGEIVENVVEAINGVVEFVPNKWEG 483
I+R C SALL++ GTCS+VRVGK+SME +IVENVV AI+GVVE VP K G
Sbjct: 189 -------IDRACGSALLYLRTGTCSVVRVGKLSMEKEQIVENVVAAIDGVVELVPKKLAG 241
Query: 484 VRS 492
VRS
Sbjct: 242 VRS 244
Score = 68.9 bits (167), Expect(2) = 8e-33
Identities = 31/41 (75%), Positives = 37/41 (90%)
Frame = +3
Query: 3 AKKKVKSENIPLSKVLKFTKLKTDYKPFEAKRKLCDSYDLF 125
AK KVKSENIP+SKVL +KLK++++PFEAKRKLCDSYD F
Sbjct: 110 AKTKVKSENIPVSKVLSLSKLKSNFRPFEAKRKLCDSYDFF 150