BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028942
         (1640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containi...   448   e-134
ref|XP_002525278.1| GTP binding protein, putative [Ricinus commu...   431   e-129
ref|XP_003608531.1| Pentatricopeptide repeat-containing protein ...   419   e-125
ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containi...   422   e-125
emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]   425   e-116

>ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Glycine max]
          Length = 865

 Score =  448 bits (1152), Expect(2) = e-134
 Identities = 245/493 (49%), Positives = 321/493 (65%), Gaps = 13/493 (2%)
 Frame = +2

Query: 119  KSGKYELVYEYFGKMKRSGEAIKALTYKVLVKAFWEDDKVNEAVRVVRDMEQRGLVGAAC 298
            +SG Y+LV+E+FGKMKRSGE  KALTYKVLVK FW++ KVNEAV+ VRDME+RG++G A 
Sbjct: 371  ESGNYDLVHEFFGKMKRSGEVPKALTYKVLVKTFWKEGKVNEAVKAVRDMERRGVIGTAS 430

Query: 299  VYYELACCLCNNGRWLEAMVEIEKLKKLPRAKPLEVTFTGMILSAMDGGHVDHCINIFKR 478
            VYYELACCLCNNGRW +A++E++ ++ LP AKPLEVTFTGMI S+MDGGH++ CI IF+ 
Sbjct: 431  VYYELACCLCNNGRWQDAILEVDNIRSLPHAKPLEVTFTGMIKSSMDGGHINDCICIFEY 490

Query: 479  SKNHCAHGIGIINAMLKIYGQNDMFSEARELFENIKRDNFDSNTGPNDYSSSLISDAYTY 658
             K HC   IG IN MLK+YGQNDMFS+A+ LFE +K    +    P    SS++ D Y+Y
Sbjct: 491  MKEHCVPNIGAINTMLKVYGQNDMFSKAKVLFEEVKVAKSEFYATPEGGYSSVVPDVYSY 550

Query: 659  SSMLEASAAALQWEYFENVYKEMVLSGYQLDQSKHASLLVKASINGKCCLLEHAFGTTLE 838
            +SMLEASA A QWEYFE+VY+EM++SGYQLDQ KH SLLVKAS  GK  LLEHAF   LE
Sbjct: 551  NSMLEASATAQQWEYFEHVYREMIVSGYQLDQDKHLSLLVKASRAGKLHLLEHAFDMILE 610

Query: 839  AGEIPHLSFFTEMVFQAITQQDYRRAVAIVNTMAYAPFQVSEKQWMDLFEENRDRIXXXX 1018
            AGEIPH  FF E+V QAI Q +Y RAV ++NTMAYAPF+V+EKQW +LF+E+ DRI    
Sbjct: 611  AGEIPHHLFFFELVIQAIAQHNYERAVILINTMAYAPFRVTEKQWTNLFKESEDRISLEN 670

Query: 1019 XXXXXXXXXXXXXVKEVSVSNLLRLLQSLCGSTSTENSSNLIVCGEEIIGESLSDGSGKG 1198
                         V E++VSNL R L  LCG  ++ N S++I  G     E+  +G  +G
Sbjct: 671  LERLLDALGNCDIVSELTVSNLTRSLHVLCGLGTSRNFSSIIPFG----SENSVNGLNEG 726

Query: 1199 FEANGNFSANAKKLNSGEDFQVNND------------AASTNQPSNSGEDDAVSELAHGN 1342
             + +GN    ++++   E  +  ND             A +    N G++  V      N
Sbjct: 727  IDDDGNVPKISRRMMI-EGVESKNDILVASYHTEPETIAFSRDQVNGGDNSDVMVFRPQN 785

Query: 1343 ENICNNMEGFVTGFSFNESVDLSLDRNSKIDELGESDILNMLEHEMSDSDRTL-VPSAQE 1519
              I +    +       +  +L+LD++S  DEL E ++ +    E  D +  +  PSA E
Sbjct: 786  SYIEDGKSLYADSLECTD--NLALDKSS--DELDE-ELWDDGSSEDDDGEGVIDKPSAYE 840

Query: 1520 ILESWKESRKKDG 1558
            ILE WKE R++DG
Sbjct: 841  ILEVWKEMREEDG 853



 Score = 60.1 bits (144), Expect(2) = e-134
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +1

Query: 1   RQWRGVSWVFDQLRKGGLKPNGATYGFAMESSL 99
           +QW+GVSWVF QLRK GLKPNGATYG AME  L
Sbjct: 338 KQWKGVSWVFKQLRKSGLKPNGATYGLAMEVML 370


>ref|XP_002525278.1| GTP binding protein, putative [Ricinus communis]
            gi|223535436|gb|EEF37106.1| GTP binding protein, putative
            [Ricinus communis]
          Length = 1010

 Score =  431 bits (1109), Expect(2) = e-129
 Identities = 244/495 (49%), Positives = 307/495 (62%), Gaps = 9/495 (1%)
 Frame = +2

Query: 122  SGKYELVYEYFGKMKRSGEAIKALTYKVLVKAFWEDDKVNEAVRVVRDMEQRGLVGAACV 301
            SGKY+LV+E F KM RSGEA KALTYKVLV+AFWE+ KVNEA+  VRDME RG+VG A +
Sbjct: 519  SGKYDLVHELFRKMNRSGEAPKALTYKVLVRAFWEEGKVNEAMEAVRDMENRGVVGTASL 578

Query: 302  YYELACCLCNNGRWLEAMVEIEKLKKLPRAKPLEVTFTGMILSAMDGGHVDHCINIFKRS 481
            YYELACCLC  G W +AM+E++K+K L  +KPLEVTFTG+I+S++DGGHV  CI+IF+  
Sbjct: 579  YYELACCLCYYGMWQDAMLEVKKMKNLRHSKPLEVTFTGLIMSSLDGGHVSDCISIFEYM 638

Query: 482  KNHCAHGIGIINAMLKIYGQNDMFSEARELFENIKRDNFDSNTGPNDYSSSLISDAYTYS 661
            K +C   IG IN MLK+YG+ND+FS+A+ELF  IK        G N+  + L+ D +TYS
Sbjct: 639  KAYCVPNIGTINIMLKVYGRNDLFSKAKELFGEIK--------GTNNDGTYLVPDEFTYS 690

Query: 662  SMLEASAAALQWEYFENVYKEMVLSGYQLDQSKHASLLVKASINGKCCLLEHAFGTTLEA 841
            SMLEASA+ALQWEYFE VYKEM   GYQLDQ KHASLLV+AS  GK  LLEHAF   LEA
Sbjct: 691  SMLEASASALQWEYFELVYKEMTFCGYQLDQKKHASLLVEASRVGKYHLLEHAFDAALEA 750

Query: 842  GEIPHLSFFTEMVFQAITQQDYRRAVAIVNTMAYAPFQVSEKQWMDLFEENRDRIXXXXX 1021
            GEIPH   FTEMVFQA  QQ+Y RAV +VNT+A APF++SEKQW+DLF++N D+I     
Sbjct: 751  GEIPHHLLFTEMVFQATAQQNYERAVVLVNTLALAPFKISEKQWIDLFQKNGDKITQDGL 810

Query: 1022 XXXXXXXXXXXXVKEVSVSNLLRLLQSLCGSTSTENSSNLIVCGEEIIGESLSDGSGKGF 1201
                          E +V+NL R L SLCG   +E  S     G ++   S  D   +  
Sbjct: 811  EKLLDALRSSDVASEPTVANLSRTLHSLCGRGRSEYLSGSTSLGIDVTNSSYLDSGSRKI 870

Query: 1202 EANGNFSANAKKLNSGEDFQVNNDAASTNQPSNSGEDDA---------VSELAHGNENIC 1354
              +     +   L    D    + + + +     G DD           S    G  +IC
Sbjct: 871  MGDKGPEMHEDTLIDKTDIAYGDLSVTRSNTGGEGSDDTDEASSSPRNYSTDRDGIASIC 930

Query: 1355 NNMEGFVTGFSFNESVDLSLDRNSKIDELGESDILNMLEHEMSDSDRTLVPSAQEILESW 1534
             N++ F    +   S D  LD     DE+     +N    ++ DS  T +PSA EIL+ W
Sbjct: 931  TNVKIFGDDEASGASTD-CLD----FDEMEYGIPIN----QVDDSCGTKLPSADEILDIW 981

Query: 1535 KESRKKDGIFFSFQL 1579
            KESR K  +FF FQL
Sbjct: 982  KESR-KGRLFFPFQL 995



 Score = 59.7 bits (143), Expect(2) = e-129
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = +1

Query: 1   RQWRGVSWVFDQLRKGGLKPNGATYGFAMESSL 99
           +QW+GV+WVF+QLRK GLKPNGATYG AME  L
Sbjct: 485 QQWKGVAWVFEQLRKSGLKPNGATYGLAMEVML 517


>ref|XP_003608531.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355509586|gb|AES90728.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 877

 Score =  419 bits (1076), Expect(2) = e-125
 Identities = 233/498 (46%), Positives = 313/498 (62%), Gaps = 10/498 (2%)
 Frame = +2

Query: 119  KSGKYELVYEYFGKMKRSGEAIKALTYKVLVKAFWEDDKVNEAVRVVRDMEQRGLVGAAC 298
            +SG Y+LV+E F KM+R+GE  +ALTYKV+V+ FW++ KV+EAV+ VRDME+RG++G A 
Sbjct: 393  QSGNYDLVHELFEKMQRNGEVPEALTYKVMVRTFWKEGKVDEAVKAVRDMERRGVMGTAS 452

Query: 299  VYYELACCLCNNGRWLEAMVEIEKLKKLPRAKPLEVTFTGMILSAMDGGHVDHCINIFKR 478
            VYYELACCLCN GRW +A +E+EK+K+LP AKPLEVTFTGMI S+MDGGH+D CI IF+ 
Sbjct: 453  VYYELACCLCNCGRWQDATLEVEKIKRLPHAKPLEVTFTGMIRSSMDGGHIDDCICIFEY 512

Query: 479  SKNHCAHGIGIINAMLKIYGQNDMFSEARELFENIKRDNFDSNTGPNDYSSSLISDAYTY 658
             ++HCA  +G +N MLK+Y QNDMFS A+ LFE +K              S L  DAYTY
Sbjct: 513  MQDHCAPNVGTVNTMLKVYSQNDMFSTAKVLFEEVK-----------VAKSDLRPDAYTY 561

Query: 659  SSMLEASAAALQWEYFENVYKEMVLSGYQLDQSKHASLLVKASINGKCCLLEHAFGTTLE 838
            + MLEAS+   QWEYFE+VYKEM+LSGY LDQ+KH  LLVKAS  GK  LLEHAF   LE
Sbjct: 562  NLMLEASSRGHQWEYFEHVYKEMILSGYHLDQNKHLPLLVKASRAGKLHLLEHAFDMVLE 621

Query: 839  AGEIPHLSFFTEMVFQAITQQDYRRAVAIVNTMAYAPFQVSEKQWMDLFEENRDRIXXXX 1018
            AGEIPH  FF E+V QAI Q +Y RA+ +++TMA+AP++V+EKQW +LF+EN DRI    
Sbjct: 622  AGEIPHHLFFFELVIQAIAQHNYERAIILLSTMAHAPYRVTEKQWTELFKENEDRINHEN 681

Query: 1019 XXXXXXXXXXXXXVKEVSVSNLLRLLQSLCGSTSTENSSNLIVCGEE---IIGESLSDG- 1186
                         V E ++SNL R L  LCG  S+ N S++I    E    + E+++ G 
Sbjct: 682  LKRLLDDLGNCNVVSEATISNLSRSLHDLCGLGSSRNISSIIPFRSENVDCLNETINGGE 741

Query: 1187 SGKGFEANGNFSANAKKLNSGEDFQVNNDAASTNQPSNSGEDDAVSELAHGNENICNNME 1366
            +GK    +G       +  SG D     D A  +    +  DD V  + + +  +C    
Sbjct: 742  NGKAPNFSGRMMIEGAE--SGNDILFGGDQAEPDM--FTFNDDQVDRVNNNDVVVCRPQN 797

Query: 1367 GFVTGFSF-----NESVD-LSLDRNSKIDELGESDILNMLEHEMSDSDRTLVPSAQEILE 1528
              +   S       E +D L+LD++S   E   SD  +  + +  D +    PSA +ILE
Sbjct: 798  RVIEDKSSFCVDRPEFLDRLTLDKSSDDSEDELSDDESYEDDDDGDKEVIDKPSAYQILE 857

Query: 1529 SWKESRKKDGIFFSFQLD 1582
            +WKE R++D      ++D
Sbjct: 858  AWKEMREEDKSLLHSEID 875



 Score = 57.4 bits (137), Expect(2) = e-125
 Identities = 24/33 (72%), Positives = 27/33 (81%)
 Frame = +1

Query: 1   RQWRGVSWVFDQLRKGGLKPNGATYGFAMESSL 99
           +QW+GVSWVF Q+RK  LKPNGATYG AME  L
Sbjct: 360 KQWKGVSWVFQQMRKSSLKPNGATYGLAMEVML 392


>ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Cucumis sativus]
            gi|449499902|ref|XP_004160949.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Cucumis sativus]
          Length = 860

 Score =  422 bits (1085), Expect(2) = e-125
 Identities = 240/489 (49%), Positives = 312/489 (63%), Gaps = 7/489 (1%)
 Frame = +2

Query: 119  KSGKYELVYEYFGKMKRSGEAIKALTYKVLVKAFWEDDKVNEAVRVVRDMEQRGLVGAAC 298
            KSGKYE ++  F KMK++G+ +KA TY+VLVKAFWE+  VN A+  VRDMEQRG+VG+A 
Sbjct: 390  KSGKYEQLHNLFTKMKKNGQTLKANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSAS 449

Query: 299  VYYELACCLCNNGRWLEAMVEIEKLKKLPRAKPLEVTFTGMILSAMDGGHVDHCINIFKR 478
            VYYELACCLC NG+W +A+VE+EK+K L   KPL VTFTGMI S+ +GGH+D CI+IF+ 
Sbjct: 450  VYYELACCLCYNGKWQDALVEVEKMKTLSHMKPLVVTFTGMISSSFNGGHIDDCISIFEY 509

Query: 479  SKNHCAHGIGIINAMLKIYGQNDMFSEARELFENIKRDNFDSNTGPNDYSSSLISDAYTY 658
             K  CA  IG IN MLK+YG+NDM+S+A++LFE IKR     ++  +    SL+ D YTY
Sbjct: 510  MKQICAPNIGTINTMLKVYGRNDMYSKAKDLFEEIKRK--ADSSSHDSAVPSLVPDEYTY 567

Query: 659  SSMLEASAAALQWEYFENVYKEMVLSGYQLDQSKHASLLVKASINGKCCLLEHAFGTTLE 838
            +SMLEA+A++LQWEYFE+VY+EM LSGYQLDQSKHA LLV+AS  GK  LL+HAF T LE
Sbjct: 568  ASMLEAAASSLQWEYFESVYREMALSGYQLDQSKHALLLVEASKAGKWYLLDHAFDTILE 627

Query: 839  AGEIPHLSFFTEMVFQAITQQDYRRAVAIVNTMAYAPFQVSEKQWMDLFEENRDRIXXXX 1018
            AG+IPH   FTEM+ Q  TQ +Y +AV +V TM YAPFQVSE+QW +LFE N DRI    
Sbjct: 628  AGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTMGYAPFQVSERQWTELFEGNTDRI-RRN 686

Query: 1019 XXXXXXXXXXXXXVKEVSVSNLLRLLQSLCGSTSTENSSNLIVCGEEIIGESLSDGSGKG 1198
                           E +VSNL R LQSLC     EN+S  + C  +   E         
Sbjct: 687  NLKQLLHALGDCDASEATVSNLSRSLQSLCKFDIPENTSQSVACDHDATDE--------- 737

Query: 1199 FEANGNFSANAKKLNSGEDFQVN---NDAASTNQPSNSGEDDAVSELAHGNENICNNMEG 1369
             +   + +    KL+  ED  ++    D AS N   NS      S+++  + +I +   G
Sbjct: 738  LQLPDSENMENMKLHPDEDESLDIIPVDHASLNMKVNS-----ESKMSPWSVSISDGALG 792

Query: 1370 FVTGFSFNESVDLSLDRNSKIDELGES----DILNMLEHEMSDSDRTLVPSAQEILESWK 1537
              TG    +  D S + +S  D  GES    + LN L  E  D+  + +P+  EILE+WK
Sbjct: 793  --TG----QFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSNLPAVNEILETWK 846

Query: 1538 ESRKKDGIF 1564
            E RK DG+F
Sbjct: 847  EERKADGLF 855



 Score = 53.5 bits (127), Expect(2) = e-125
 Identities = 22/32 (68%), Positives = 26/32 (81%)
 Frame = +1

Query: 4   QWRGVSWVFDQLRKGGLKPNGATYGFAMESSL 99
           +W+GV WVF QLRK GL+PNGATYG +ME  L
Sbjct: 358 EWKGVYWVFTQLRKSGLRPNGATYGLSMEVML 389


>emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]
          Length = 615

 Score =  425 bits (1093), Expect = e-116
 Identities = 247/463 (53%), Positives = 299/463 (64%), Gaps = 12/463 (2%)
 Frame = +2

Query: 203  VLVKAFWEDDKVNEAVRVVRDMEQRGLVGAACVYYELACCLCNNGRWLEAMVEIEKLKKL 382
            VLV+AFWE+ KVNEAV VVRDME+RG+VG A VYYELACCLCNNGRW +A+VE+EKLKK 
Sbjct: 12   VLVRAFWEEGKVNEAVEVVRDMERRGVVGIASVYYELACCLCNNGRWQDAIVEVEKLKKR 71

Query: 383  PRAKPLEVTFTGMILSAMDGGHVDHCINIFKRSKNHCAHGIGIINAMLKIYGQNDMFSEA 562
            P +KPLEVTFTGMI S+MDGGH+D C++IF+  K HC+  IG INAMLK+YG+NDMFS+A
Sbjct: 72   PHSKPLEVTFTGMITSSMDGGHLDDCLSIFEHMKYHCSPNIGTINAMLKVYGRNDMFSKA 131

Query: 563  RELFENIKRDNFDSNTGPNDYSSSLISDAYTYSSMLEASAAALQWEYFENVYKEMVLSGY 742
            +ELFE  KR  F SNT  +D S SL+ D YTYSSMLEASA+A QWE+FE VYKEM LSGY
Sbjct: 132  KELFEETKRSTFASNTCMDDGSISLVPDLYTYSSMLEASASAHQWEFFEYVYKEMTLSGY 191

Query: 743  QLDQSKHASLLVKASINGKCCLLEHAFGTTLEAGEIPHLSFFTEMVFQAITQQDYRRAVA 922
            QLDQSKHA LL KAS  GK  LLEHAF T LEAGEIPH S FTEM+ QA  Q +Y RAV 
Sbjct: 192  QLDQSKHALLLGKASRAGKWHLLEHAFDTILEAGEIPHPSIFTEMICQATAQHNYERAVT 251

Query: 923  IVNTMAYAPFQVSEKQWMDLFEENRDRIXXXXXXXXXXXXXXXXXVKEVSVSNLLRLLQS 1102
            ++N MA+APF VSEKQW DLF  + DRI                  +E +VSNL + LQS
Sbjct: 252  LINAMAHAPFVVSEKQWTDLFVTD-DRISRVNLEKLLDSLHNCDVAEEATVSNLYKSLQS 310

Query: 1103 LCGSTSTENSSNLIVCGEEIIGESLSDGSG------KGFEANGNFSANAKKLNSGEDFQV 1264
            LCGS ++ + S++    E +I   L+  SG      K F    +  A    L+  E+  V
Sbjct: 311  LCGSGTSMDQSSVAFGDEAMIRTPLNGNSGELDDNKKVFFQKFSADARGSDLSPHENPPV 370

Query: 1265 NN-----DAASTNQPSNSGEDDAVSELAHGNENICNNMEGFVTGFSFNESVDLSLDRNSK 1429
             N     D  S N   +  EDD         E I         G     +   +LD NS+
Sbjct: 371  KNSDVTFDIFSVNLTRSEEEDDDTD-----GEAISEAFNYACNGDEVASNEPNTLDGNSE 425

Query: 1430 IDELGESDI-LNMLEHEMSDSDRTLVPSAQEILESWKESRKKD 1555
                G + I LNM   E  DS  + +PSA EILE+WK+SR++D
Sbjct: 426  ----GINKIELNMRAKE-DDSHGSNLPSANEILETWKKSRERD 463