BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028891
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513494.1| Photosystem II 5 kDa protein, chloroplast pr...    79   7e-13
ref|XP_002314076.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|1...    76   4e-12
gb|ACI15739.1| chloroplast photosystem II 5 kDa precursor protei...    75   6e-12
ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago trunc...    71   1e-10

>ref|XP_002513494.1| Photosystem II 5 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223547402|gb|EEF48897.1|
           Photosystem II 5 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 106

 Score = 78.6 bits (192), Expect = 7e-13
 Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
 Frame = -1

Query: 542 APARCGFVMVKASKVTS-ENVVVKNTGKEETSNGRRDLMFXXXXXXXXXXXXXXXADEPK 366
           AP R G ++ KASKVT  E V V+   KEE+S+GRRDL+F               ADEPK
Sbjct: 23  APRR-GLIVAKASKVTEGERVNVEMKNKEESSSGRRDLVFAAAAAAAFSVAKVAMADEPK 81

Query: 365 RGSLEAKKKYAQVCVTMPTARIC 297
            G+L+AKKKYA +CV+MPTA+IC
Sbjct: 82  AGTLDAKKKYASICVSMPTAKIC 104


>ref|XP_002314076.1| predicted protein [Populus trichocarpa] gi|222850484|gb|EEE88031.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score = 78.2 bits (191), Expect = 9e-13
 Identities = 49/98 (50%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
 Frame = -1

Query: 581 GSAVAVGVAATKPAPARCGFVMVKASKVTSENVVVKNTGKEETSNGRRDLMFXXXXXXXX 402
           GSA+A   + T     R G ++ KAS+ T E V V+   +EE+S GRRDLMF        
Sbjct: 13  GSAMAKQPSTTP----RRGLIVAKASRAT-EGVNVEMKNREESSGGRRDLMFAAAAAAAY 67

Query: 401 XXXXXXXADE-PKRGSLEAKKKYAQVCVTMPTARICRN 291
                  ADE P+RG+ EAKKKYA +CVTMPTARICRN
Sbjct: 68  SIARVAIADEEPRRGTPEAKKKYAPICVTMPTARICRN 105


>ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|118487685|gb|ABK95667.1|
           unknown [Populus trichocarpa]
           gi|118488853|gb|ABK96236.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118488867|gb|ABK96243.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|118489821|gb|ABK96710.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118489889|gb|ABK96742.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|222845656|gb|EEE83203.1| predicted protein [Populus
           trichocarpa]
          Length = 105

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
 Frame = -1

Query: 533 RCGFVMVKASKVTSENVVVKNTGKEETSNGRRDLMFXXXXXXXXXXXXXXXADE-PKRGS 357
           R G ++ KAS+ T+E V V+   KEE+S+GRRDLMF               ADE P+RG+
Sbjct: 25  RRGLIVAKASR-TTEGVNVEMKNKEESSSGRRDLMFAAAAAAAYSIARVAIADEEPERGT 83

Query: 356 LEAKKKYAQVCVTMPTARICR 294
            EAKKKYA +CVTMPTARICR
Sbjct: 84  PEAKKKYAPICVTMPTARICR 104


>gb|ACI15739.1| chloroplast photosystem II 5 kDa precursor protein [Picrorhiza
           kurrooa]
          Length = 102

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 45/84 (53%), Positives = 52/84 (61%)
 Frame = -1

Query: 545 PAPARCGFVMVKASKVTSENVVVKNTGKEETSNGRRDLMFXXXXXXXXXXXXXXXADEPK 366
           P   R G  MV+ASK  SE + V    KEE++N RRDLMF               ADEPK
Sbjct: 21  PTTGRGGVAMVRASK-ESEKLTVNV--KEESNNTRRDLMFAMAAVVASSIANFAMADEPK 77

Query: 365 RGSLEAKKKYAQVCVTMPTARICR 294
           RG++EAKKKYA VCVT PTARIC+
Sbjct: 78  RGTVEAKKKYAAVCVTNPTARICK 101


>ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago truncatula]
           gi|355488305|gb|AES69508.1| Photosystem II 5 kDa protein
           [Medicago truncatula]
          Length = 106

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 40/78 (51%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
 Frame = -1

Query: 521 VMVKASKVTSENVVVKNTGKEETSNGRRDLMFXXXXXXXXXXXXXXXADE-PKRGSLEAK 345
           V+V A +      +++    +E SNGRRDLMF               ADE PKRG+ EAK
Sbjct: 29  VVVNAVRAVEGEKMIRYDNSKEGSNGRRDLMFAAAAAAVSTFAGVAMADEEPKRGTPEAK 88

Query: 344 KKYAQVCVTMPTARICRN 291
           KKYA VCVTMPTARICRN
Sbjct: 89  KKYAPVCVTMPTARICRN 106