BLASTX nr result

ID: Panax21_contig00028818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028818
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277950.2| PREDICTED: tRNA-specific adenosine deaminase...    70   2e-10
ref|XP_002315970.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002312358.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07

>ref|XP_002277950.2| PREDICTED: tRNA-specific adenosine deaminase, chloroplastic-like
           [Vitis vinifera]
          Length = 1342

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
 Frame = -1

Query: 290 KRDGFTGDSSNGYERDH---RESRYDGEVSEEVDRHRSYVEEQGVVLRNENTVKGLHATS 120
           K  G   +SS+GY++D     E   D EV E+ ++ R   E  G V +  NT  G +   
Sbjct: 251 KHRGIVRESSSGYKKDSWKTEEGNVDSEVVEKFEKQRDEAEGYGEVAKWGNTSVGSYVVG 310

Query: 119 TGIDYDLRKKSEKKLNEELTEQTESWKESSEKHSRLSDV 3
           +G++++ RKKSEKKL E   E+TES +E+SE  S++S +
Sbjct: 311 SGVEWERRKKSEKKLAEVSIERTESMEETSEMDSKVSQI 349


>ref|XP_002315970.1| predicted protein [Populus trichocarpa] gi|222865010|gb|EEF02141.1|
           predicted protein [Populus trichocarpa]
          Length = 1071

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
 Frame = -1

Query: 266 SSNGYERDHR--ESRYDGEVSEEVDRHRSYVEEQGVVLRNENTVKGLHATSTGIDYDLRK 93
           SS+GY ++ R  E R +G+V EE  RHR   E +G VL    +     A  TG+++D RK
Sbjct: 153 SSSGYRKELRSGEGRSEGQVVEEFRRHRDGTEWKGEVLEARTS-----ARRTGVEWDPRK 207

Query: 92  KSEKKLNEELTEQTESWKESSEKHSRLS 9
           KSEKKL E   E+T+S +ESS+  SR++
Sbjct: 208 KSEKKLTE--IEETQSERESSQMQSRMA 233


>ref|XP_002312358.1| predicted protein [Populus trichocarpa] gi|222852178|gb|EEE89725.1|
           predicted protein [Populus trichocarpa]
          Length = 1364

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 1/152 (0%)
 Frame = -1

Query: 461 EYVKFQSTEEDSRLNEDSMEIFSRGESCRVRXXXXXXXXXXXXXXXXXXXXXSKIQAKRD 282
           E  K + T ++   + +  +    GE+CR +                     ++ Q +  
Sbjct: 228 ELRKEEFTRKEGSEDREEKKTVLEGENCRGKRGSSSVSSYYSLSSAEDFESDTEAQDEHV 287

Query: 281 GFTGDSSNGY-ERDHRESRYDGEVSEEVDRHRSYVEEQGVVLRNENTVKGLHATSTGIDY 105
               +SS+GY E    E R  G+V EE  RHR   E +G VL    + +      TG+++
Sbjct: 288 DCLKESSHGYKELRSGEGRLKGQVVEEFKRHRDGTEWKGEVLEARTSSR-----RTGVEW 342

Query: 104 DLRKKSEKKLNEELTEQTESWKESSEKHSRLS 9
           DLRKKSEKKL E   E+T S +ES +  SR++
Sbjct: 343 DLRKKSEKKLTE--IEETRSGRESLQMQSRMA 372