BLASTX nr result

ID: Panax21_contig00028721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028721
         (938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532854.1| hypothetical protein RCOM_1166040 [Ricinus c...   112   1e-22
ref|XP_002513052.1| conserved hypothetical protein [Ricinus comm...   104   3e-20
ref|XP_002533066.1| conserved hypothetical protein [Ricinus comm...   101   2e-19
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]    96   1e-17
ref|XP_003635054.1| PREDICTED: cysteine desulfurase 1, mitochond...    96   2e-17

>ref|XP_002532854.1| hypothetical protein RCOM_1166040 [Ricinus communis]
           gi|223527391|gb|EEF29532.1| hypothetical protein
           RCOM_1166040 [Ricinus communis]
          Length = 348

 Score =  112 bits (280), Expect = 1e-22
 Identities = 59/120 (49%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
 Frame = +2

Query: 2   SEKVGRAIGNYISKYVLSDEHNFDG*LKTFMRIRVAMNIYKPLVCKMKMKRPGGEWFWIQ 181
           SEKV R IGNYI KYV S  +NFD   + +MRIRV ++  KP++  M +K+ GG WF I+
Sbjct: 97  SEKVARNIGNYIEKYVDSHPNNFDDSWRDYMRIRVKVDATKPIISSMNIKKVGGVWFKIE 156

Query: 182 FKYERLPTFYFYCGFMDHSEKFCHLSLENPIPPSEFPFGLWLRAQPRRNN-NRMADKWLR 358
           FKYERL  FYF CG + HS+KF H  LEN +   E      +RA PRR     + ++WLR
Sbjct: 157 FKYERLVIFYFICGLIGHSDKFFHKILENSV--IEHTLSKDVRAPPRRTQVASVGERWLR 214


>ref|XP_002513052.1| conserved hypothetical protein [Ricinus communis]
           gi|223548063|gb|EEF49555.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 501

 Score =  104 bits (260), Expect = 3e-20
 Identities = 54/122 (44%), Positives = 78/122 (63%), Gaps = 3/122 (2%)
 Frame = +2

Query: 2   SEKVGRAIGNYISKYVLSDEHNFDG*LKTFMRIRVAMNIYKPLVCKMKMKRPGGEWFWIQ 181
           SEKV ++IGNY+  YV SDE NFDG  K F+R+++ +++ KP++  MK+K+PGG+W  ++
Sbjct: 63  SEKVVKSIGNYVGTYVESDEKNFDGSWKEFIRVKIKIDVSKPIMAFMKIKKPGGDWLNLE 122

Query: 182 FKYERLPTFYFYCGFMDHSEKF--CHLSLENPIPPSEFPFGLWLRAQPRRNNNRMADK-W 352
           F YERL    F CG + HS+KF  C L  EN +    +     +RA PRR+    A + W
Sbjct: 123 FNYERLGIACFICGRVGHSDKFYRCLLEFENIV----YKLSKEVRAPPRRSQTASAGEIW 178

Query: 353 LR 358
           LR
Sbjct: 179 LR 180


>ref|XP_002533066.1| conserved hypothetical protein [Ricinus communis]
           gi|223527130|gb|EEF29305.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 403

 Score =  101 bits (252), Expect = 2e-19
 Identities = 52/131 (39%), Positives = 76/131 (58%)
 Frame = +2

Query: 5   EKVGRAIGNYISKYVLSDEHNFDG*LKTFMRIRVAMNIYKPLVCKMKMKRPGGEWFWIQF 184
           EKV ++IGNY+ +Y+ SD +NF G  + ++R+RV ++  KPL+  MK+K+ GGEW  I F
Sbjct: 151 EKVAKSIGNYVGEYLESDLNNFHGTWREYIRLRVRVDSAKPLLANMKIKKVGGEWSAIDF 210

Query: 185 KYERLPTFYFYCGFMDHSEKFCHLSLENPIPPSEFPFGLWLRAQPRRNNNRMADKWLRTS 364
           KYERL  FYF CG + H ++FC   LENP                  +  R+  K +R +
Sbjct: 211 KYERLSIFYFICGHIGHLDRFCRKVLENP------------------DVERLLSKDIRAA 252

Query: 365 LKDRLPPTTGE 397
           LK  +  + GE
Sbjct: 253 LKRTMAGSAGE 263


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 12/226 (5%)
 Frame = +2

Query: 2   SEKVGRAIGNYISKYVLSDEHNFDG*LKTFMRIRVAMNIYKPLVCKMKMKRPGGEWFWIQ 181
           S  VG+ +GN+I K+V  D +N  G  + FMRIRV +++ +PL    K+++P GEW  + 
Sbjct: 85  SLNVGKQLGNFIGKFVDYDINNNAGLWRNFMRIRVLLDVRQPLKRWKKIRKPQGEWSLVH 144

Query: 182 FKYERLPTFYFYCGFMDHSEKFCHLSLENPIPPSEFPFGLWLRAQPRRNNNRMADKWLRT 361
           FKYERL TF + CG + HSEKFC           +  +   LR   RR +    ++WLR 
Sbjct: 145 FKYERLSTFCYLCGMLGHSEKFCDKLFSITDGDIKREWSPDLRVPVRRGSEYGGERWLRE 204

Query: 362 SLKDRLPPTTGESSTGVDMDLGSS-SNPGTLRTVVLHDK-SLSNYQVKMPHLTTTTKISH 535
           ++++    T  + S   ++ +GS   +  +++ V+  D   + ++Q      +   +I H
Sbjct: 205 TMEN---STHEDDSVYGNITMGSGYGSDFSIQGVISSDSGGIKDFQT----TSRLPQIFH 257

Query: 536 DLQDLPAGTSIKPITGPITVEDAV----------DNGLIITDQKRR 643
            LQ  P  T+ KP     T    +          +NGL I + K+R
Sbjct: 258 GLQTFPTCTT-KPSGSSHTDGHVINSGGDNMGFKENGLEIVENKKR 302



 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 27/54 (50%), Positives = 38/54 (70%)
 Frame = +1

Query: 775 PSSMTTLSWNCRGLGNPRTIQVLVDLVHLYKPMFVFLIETMVPRDMILAIKNKL 936
           P++M  +SWNCRGLGNPRT+  L ++    KP F+FLIET+V    +  +K+KL
Sbjct: 304 PTAMIGISWNCRGLGNPRTVLALCEINKSRKPDFIFLIETLVHSAQVEKLKSKL 357


>ref|XP_003635054.1| PREDICTED: cysteine desulfurase 1, mitochondrial [Vitis vinifera]
          Length = 865

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 12/229 (5%)
 Frame = +2

Query: 2    SEKVGRAIGNYISKYVLSDEHNFDG*LKTFMRIRVAMNIYKPLVCKMKMKRPGGEWFWIQ 181
            S  VG+ + N+I K+V  + +N  G  + FMRIRV +++ +PL    ++++P GEW  + 
Sbjct: 592  SLNVGKQLDNFIGKFVDYNINNNAGLWRNFMRIRVLLDVRQPLKMWKRIRKPQGEWSLVH 651

Query: 182  FKYERLPTFYFYCGFMDHSEKFCHLSLENPIPPSEFPFGLWLRAQPRRNNNRMADKWLRT 361
            FKYERL TF + CG + HSEKFC+          +  +   LR   RR +    ++WLR 
Sbjct: 652  FKYERLSTFCYLCGMLGHSEKFCNKLFLITDGDIKREWSTDLRVPVRRGSEYGGERWLRE 711

Query: 362  SLKDRLPPTTGESSTGVDMDLGSSSNPGTLRTVVLHDKSLSNYQVKMPHLTTTTKISHDL 541
            ++++       E    + M  G  S+      +      + ++Q          +I H L
Sbjct: 712  TMENSTHADDSEYG-NIAMGSGYGSDFSIQEVISSESGGIKDFQT----ANRLPQILHGL 766

Query: 542  QDLPAGTSIKPITGPITVEDAV-----------DNGL-IITDQKRRRTD 652
            Q  P  T+ KP TG    +  V           +NGL I+ D+KRRR +
Sbjct: 767  QTFPTCTT-KP-TGSSHADGHVITSRGDNMGFKENGLEIVEDKKRRRAE 813


Top