BLASTX nr result

ID: Panax21_contig00028635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028635
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514322.1| conserved hypothetical protein [Ricinus comm...    84   1e-14
ref|XP_002324414.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002331146.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_003629642.1| hypothetical protein MTR_8g083460 [Medicago ...    62   6e-08
gb|ABK25772.1| unknown [Picea sitchensis]                              59   4e-07

>ref|XP_002514322.1| conserved hypothetical protein [Ricinus communis]
           gi|223546778|gb|EEF48276.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 42/89 (47%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
 Frame = +3

Query: 117 MCHPRYPLVSEKDLAKPKRQRWYVLQA------PAAVETGRRFVPTVALVAANGGGSDRL 278
           MC+   PL S + LA+   QRW +L+A       A  ET      + A  A  GGG   +
Sbjct: 1   MCNQVVPLNSHRALAE--EQRWLLLRAVQLVTEQAGTETANAAAASAAGSADAGGGGGSI 58

Query: 279 KQCICSPTKHPGSFRCRHHHAGYVWGHRI 365
           K C+CSPT+HPGSFRCRHHH  Y WG RI
Sbjct: 59  KMCVCSPTRHPGSFRCRHHHVDYAWGRRI 87


>ref|XP_002324414.1| predicted protein [Populus trichocarpa] gi|222865848|gb|EEF02979.1|
           predicted protein [Populus trichocarpa]
          Length = 85

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 40/84 (47%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
 Frame = +3

Query: 117 MCHPR-YPLVSEKDLAKPKRQRWYVLQAPAAVETGRRFVPTVALVAANGGGSDRLKQCIC 293
           MCHP   P VS   +     +RW VLQA   VET     PT      +   +  +K+C+C
Sbjct: 1   MCHPPGVPWVSRNLVVY---RRWLVLQA---VETETGHAPTEVAATGSSAVAGSIKKCLC 54

Query: 294 SPTKHPGSFRCRHHHAGYVWGHRI 365
           SPT+HPGSFRCRHH + YVWG RI
Sbjct: 55  SPTRHPGSFRCRHHRSDYVWGGRI 78


>ref|XP_002331146.1| predicted protein [Populus trichocarpa] gi|222873229|gb|EEF10360.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/85 (50%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
 Frame = +3

Query: 117 MCHPRYPLVSEKDLAKPKRQRWYVLQAPAAVETGRRFVPTVALVAANGGG--SDRLKQCI 290
           MCHP    VS+++L     QR  VLQA   VET      T   VAA GG   S  + +C+
Sbjct: 1   MCHPGVLSVSQRNLVV--YQRRLVLQA---VETETSHARTE--VAAGGGSAISRSINKCL 53

Query: 291 CSPTKHPGSFRCRHHHAGYVWGHRI 365
           CSPT+HPGSFRCRHH + YVW  RI
Sbjct: 54  CSPTRHPGSFRCRHHRSDYVWSGRI 78


>ref|XP_003629642.1| hypothetical protein MTR_8g083460 [Medicago truncatula]
           gi|357521031|ref|XP_003630804.1| hypothetical protein
           MTR_8g103600 [Medicago truncatula]
           gi|355523664|gb|AET04118.1| hypothetical protein
           MTR_8g083460 [Medicago truncatula]
           gi|355524826|gb|AET05280.1| hypothetical protein
           MTR_8g103600 [Medicago truncatula]
          Length = 83

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
 Frame = +3

Query: 231 PTVALVAANGGGSDR------LKQCICSPTKHPGSFRCRHHHAGYVWGHR 362
           P V +     GG DR      +KQC+CSP+KHPGSFRCR H A YVW +R
Sbjct: 31  PVVVVAGQARGGGDRAGEDGSIKQCVCSPSKHPGSFRCRQHQAKYVWRNR 80


>gb|ABK25772.1| unknown [Picea sitchensis]
          Length = 88

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
 Frame = +3

Query: 117 MCHPRYPLVSEKDLAKPKRQRWYVL--QAPAAVETGRRFV-PTVALVAANGGGSDRLKQC 287
           MCH  +PL+  ++  +  R   Y    Q   A E G R + P      A G G ++   C
Sbjct: 1   MCHSNWPLIICENSGEDGRNTDYRQHQQLILAEEAGNRLISPRSEEETAEGSGKNKF--C 58

Query: 288 ICSPTKHPGSFRCRHHHAGYVWGHR 362
           +CSPT H GSFRCR H + Y WG R
Sbjct: 59  LCSPTNHAGSFRCRLHRSSYKWGRR 83


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