BLASTX nr result
ID: Panax21_contig00028602
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00028602 (476 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 102 3e-20 ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2... 75 7e-12 ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2... 71 1e-10 ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2... 70 2e-10 ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein A... 65 6e-09 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 102 bits (254), Expect = 3e-20 Identities = 52/143 (36%), Positives = 83/143 (58%), Gaps = 2/143 (1%) Frame = -1 Query: 473 GLKSIIEWNKSLIMMHLLNIIRVDSSSLWAN*IITTVLKGRNLWNYQAPSDFSWI*KQVL 294 G+KSI EWNK ++ H+ N+ S+W+ I + +L+GRN W + P + SW ++L Sbjct: 162 GIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKIL 221 Query: 293 KLRQTA*NHVSYIVGNGSNTSLWFDPWINGNPI--NHSKTLLANSGLSAKATVADIIFNS 120 KLR A + YI+G+G TSLWFD W +P+ ++ + + +SG++ A V +I NS Sbjct: 222 KLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNS 281 Query: 119 SWFLPSS*HHEMIELRSLIEAQP 51 W P++ + I +IEA P Sbjct: 282 EWKTPTT---QAIGWHPIIEAIP 301 >ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1| predicted protein [Populus trichocarpa] Length = 1386 Score = 74.7 bits (182), Expect = 7e-12 Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 2/109 (1%) Frame = -1 Query: 371 TTVLKGRNLWNYQAPSDFSWI*KQVLKLRQTA*NHVSYIVGNGSNTSLWFDPWINGNPI- 195 + +L+GRN W + P + SW ++LKLR A + YI+G+G TSLWFD W +P+ Sbjct: 1069 SNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLA 1128 Query: 194 -NHSKTLLANSGLSAKATVADIIFNSSWFLPSS*HHEMIELRSLIEAQP 51 ++ + + +SG++ A V +I NS W P++ + I +IEA P Sbjct: 1129 DSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTT---QAIGWHPIIEAIP 1174 >ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1| predicted protein [Populus trichocarpa] Length = 1046 Score = 70.9 bits (172), Expect = 1e-10 Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 2/110 (1%) Frame = -1 Query: 374 ITTVLKGRNLWNYQAPSDFSWI*KQVLKLRQTA*NHVSYIVGNGSNTSLWFDPWINGNPI 195 I+ +L+GRN W + P + S ++LKLR A + YI+G+G TSLWFD W +P+ Sbjct: 728 ISNLLRGRNFWTIKTPQNCSSAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPL 787 Query: 194 --NHSKTLLANSGLSAKATVADIIFNSSWFLPSS*HHEMIELRSLIEAQP 51 ++ + + +SG++ A V +I NS W P++ + I +IEA P Sbjct: 788 ADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTT---QAIGWHPIIEAIP 834 >ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1| predicted protein [Populus trichocarpa] Length = 331 Score = 69.7 bits (169), Expect = 2e-10 Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 2/107 (1%) Frame = -1 Query: 365 VLKGRNLWNYQAPSDFSWI*KQVLKLRQTA*NHVSYIVGNGSNTSLWFDPWINGNPI--N 192 ++ RN W + P + SW ++LKLR A + YI+G+G TSLWFD W +P+ + Sbjct: 16 IVISRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADS 75 Query: 191 HSKTLLANSGLSAKATVADIIFNSSWFLPSS*HHEMIELRSLIEAQP 51 + + + +SG++ A V +I NS W P++ + I +IEA P Sbjct: 76 YGERFIYDSGMAKNAKVNVLIQNSEWKTPTT---QAIGWHPIIEAIP 119 >ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis sativus] Length = 265 Score = 65.1 bits (157), Expect = 6e-09 Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 2/103 (1%) Frame = -1 Query: 431 MHLLNIIRVDSSSLWAN*IITTVLKGRNLWNYQAPSDFSWI*KQVLKLRQTA*NHVSYIV 252 + +L ++ V S SLW + +LKGR+LW SW + +L+ R+ HV+ V Sbjct: 158 LKILWLLLVKSGSLWVAWVEAYILKGRSLWEIDVGVGRSWCFRAILRKREILEAHVNIEV 217 Query: 251 GNGSNTSLWFDPWINGNPI--NHSKTLLANSGLSAKATVADII 129 GNG +W DPWI G PI ++++ ++G A + D + Sbjct: 218 GNGKKCRVWLDPWIQGGPIIQQFGESVIYDAGSRWDARLVDFM 260