BLASTX nr result

ID: Panax21_contig00028538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028538
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16457.3| unnamed protein product [Vitis vinifera]              365   1e-98
ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein lig...   365   1e-98
emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]   365   1e-98
gb|ACJ02343.1| U-box domain-containing protein [Helianthus annuus]    344   1e-92
ref|XP_002528126.1| hypothetical protein RCOM_0146510 [Ricinus c...   341   1e-91

>emb|CBI16457.3| unnamed protein product [Vitis vinifera]
          Length = 1084

 Score =  365 bits (936), Expect = 1e-98
 Identities = 189/294 (64%), Positives = 225/294 (76%)
 Frame = -2

Query: 885  SNNSNKSLLGRMSSTLNNRKSMKQPXXXXXXXXXXXXXNKSLDESKNRRQAEIEQALAEP 706
            S +S K L  + S + N+  SMK+P             NK  DE++ +      QA++EP
Sbjct: 135  STSSIKHLPAQKSLSNNHNNSMKEPHTFLNRSRKSMENNKIFDENRGQNHDSTVQAVSEP 194

Query: 705  ALDEVAVQAMISILTGYIKRFLKDDDFRTSLRHSCFASLNFVGLEEGFNTESKVIDNLEQ 526
            ALDEVAVQAM+SI++G++KRFLKD DFRT L H+CF+SLN + LEEG +T SKVI  LEQ
Sbjct: 195  ALDEVAVQAMVSIISGFVKRFLKDKDFRTLLHHNCFSSLNIIDLEEGESTASKVITTLEQ 254

Query: 525  AIGTVERAAEDSASAKELKKASLQLSVITGLNSNDLKDGFTSGIPNSKLSACAHLYLCVI 346
            AI TVE  AE+SAS K+LKKASLQLSVI GL+S+D+KDGFTSG+PN KLSACAHLYL +I
Sbjct: 255  AIETVELVAEESASGKDLKKASLQLSVIAGLSSDDMKDGFTSGVPNYKLSACAHLYLGLI 314

Query: 345  YKLQKKDRIAAKHLLQVFCDSPFPARTTLLPELWDDIFLPHLSHLKAWYNQEADSLANAL 166
            YKLQKKD+ +AKH+LQVFCDSPF ART LLPELWD +FLP LSHLK WYNQEADSLA+A 
Sbjct: 315  YKLQKKDKASAKHILQVFCDSPFQARTMLLPELWDYLFLPQLSHLKVWYNQEADSLADAP 374

Query: 165  SKGRKLKLLEKVYNEIMDSGTYQFAAYYKDWLTEGVEAXXXXXXXXXXXSVQGV 4
            S+ RKL+LLEKVYNEI+D GT+QFA YYKDWLTEGVEA           SV+GV
Sbjct: 375  SRQRKLELLEKVYNEILDLGTHQFAIYYKDWLTEGVEAPSVPSIHVPSVSVRGV 428


>ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
            vinifera]
          Length = 1148

 Score =  365 bits (936), Expect = 1e-98
 Identities = 189/294 (64%), Positives = 225/294 (76%)
 Frame = -2

Query: 885  SNNSNKSLLGRMSSTLNNRKSMKQPXXXXXXXXXXXXXNKSLDESKNRRQAEIEQALAEP 706
            S +S K L  + S + N+  SMK+P             NK  DE++ +      QA++EP
Sbjct: 171  STSSIKHLPAQKSLSNNHNNSMKEPHTFLNRSRKSMENNKIFDENRGQNHDSTVQAVSEP 230

Query: 705  ALDEVAVQAMISILTGYIKRFLKDDDFRTSLRHSCFASLNFVGLEEGFNTESKVIDNLEQ 526
            ALDEVAVQAM+SI++G++KRFLKD DFRT L H+CF+SLN + LEEG +T SKVI  LEQ
Sbjct: 231  ALDEVAVQAMVSIISGFVKRFLKDKDFRTLLHHNCFSSLNIIDLEEGESTASKVITTLEQ 290

Query: 525  AIGTVERAAEDSASAKELKKASLQLSVITGLNSNDLKDGFTSGIPNSKLSACAHLYLCVI 346
            AI TVE  AE+SAS K+LKKASLQLSVI GL+S+D+KDGFTSG+PN KLSACAHLYL +I
Sbjct: 291  AIETVELVAEESASGKDLKKASLQLSVIAGLSSDDMKDGFTSGVPNYKLSACAHLYLGLI 350

Query: 345  YKLQKKDRIAAKHLLQVFCDSPFPARTTLLPELWDDIFLPHLSHLKAWYNQEADSLANAL 166
            YKLQKKD+ +AKH+LQVFCDSPF ART LLPELWD +FLP LSHLK WYNQEADSLA+A 
Sbjct: 351  YKLQKKDKASAKHILQVFCDSPFQARTMLLPELWDYLFLPQLSHLKVWYNQEADSLADAP 410

Query: 165  SKGRKLKLLEKVYNEIMDSGTYQFAAYYKDWLTEGVEAXXXXXXXXXXXSVQGV 4
            S+ RKL+LLEKVYNEI+D GT+QFA YYKDWLTEGVEA           SV+GV
Sbjct: 411  SRQRKLELLEKVYNEILDLGTHQFAIYYKDWLTEGVEAPSVPSIHVPSVSVRGV 464


>emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]
          Length = 1148

 Score =  365 bits (936), Expect = 1e-98
 Identities = 189/294 (64%), Positives = 225/294 (76%)
 Frame = -2

Query: 885  SNNSNKSLLGRMSSTLNNRKSMKQPXXXXXXXXXXXXXNKSLDESKNRRQAEIEQALAEP 706
            S +S K L  + S + N+  SMK+P             NK  DE++ +      QA++EP
Sbjct: 171  STSSIKHLPAQKSLSNNHNNSMKEPHTFLNRSRKSMENNKIFDENRGQNHDSTVQAVSEP 230

Query: 705  ALDEVAVQAMISILTGYIKRFLKDDDFRTSLRHSCFASLNFVGLEEGFNTESKVIDNLEQ 526
            ALDEVAVQAM+SI++G++KRFLKD DFRT L H+CF+SLN + LEEG +T SKVI  LEQ
Sbjct: 231  ALDEVAVQAMVSIISGFVKRFLKDKDFRTLLHHNCFSSLNIIDLEEGESTASKVITTLEQ 290

Query: 525  AIGTVERAAEDSASAKELKKASLQLSVITGLNSNDLKDGFTSGIPNSKLSACAHLYLCVI 346
            AI TVE  AE+SAS K+LKKASLQLSVI GL+S+D+KDGFTSG+PN KLSACAHLYL +I
Sbjct: 291  AIETVELVAEESASGKDLKKASLQLSVIAGLSSDDMKDGFTSGVPNYKLSACAHLYLGLI 350

Query: 345  YKLQKKDRIAAKHLLQVFCDSPFPARTTLLPELWDDIFLPHLSHLKAWYNQEADSLANAL 166
            YKLQKKD+ +AKH+LQVFCDSPF ART LLPELWD +FLP LSHLK WYNQEADSLA+A 
Sbjct: 351  YKLQKKDKASAKHILQVFCDSPFQARTMLLPELWDYLFLPQLSHLKVWYNQEADSLADAP 410

Query: 165  SKGRKLKLLEKVYNEIMDSGTYQFAAYYKDWLTEGVEAXXXXXXXXXXXSVQGV 4
            S+ RKL+LLEKVYNEI+D GT+QFA YYKDWLTEGVEA           SV+GV
Sbjct: 411  SRQRKLELLEKVYNEILDLGTHQFAIYYKDWLTEGVEAPSVPSIHVPSVSVRGV 464


>gb|ACJ02343.1| U-box domain-containing protein [Helianthus annuus]
          Length = 1050

 Score =  344 bits (883), Expect = 1e-92
 Identities = 177/291 (60%), Positives = 224/291 (76%)
 Frame = -2

Query: 924 NMSGKNMQVDKRYSNNSNKSLLGRMSSTLNNRKSMKQPXXXXXXXXXXXXXNKSLDESKN 745
           N  G+++Q+D  Y+ +  K      SS+  + +S +                +S+ +++ 
Sbjct: 145 NKVGEDLQIDNDYATDYQKGGNRPGSSSSRSNRSTQNK--------------ESVRDNRA 190

Query: 744 RRQAEIEQALAEPALDEVAVQAMISILTGYIKRFLKDDDFRTSLRHSCFASLNFVGLEEG 565
           RR  EI+ ++ E ALDEVA++AMISIL+GY+K++LKD DFRTS+ H+CFA+LNF  LEE 
Sbjct: 191 RRPVEID-SVTEVALDEVAIKAMISILSGYVKKYLKDQDFRTSMYHNCFAALNFSKLEEE 249

Query: 564 FNTESKVIDNLEQAIGTVERAAEDSASAKELKKASLQLSVITGLNSNDLKDGFTSGIPNS 385
             TESKVI NLEQAI TVE+AAE+ A AK+LKKASLQLSVITGLN+NDLKDGFTSG PNS
Sbjct: 250 IVTESKVISNLEQAIETVEKAAENLADAKQLKKASLQLSVITGLNANDLKDGFTSGFPNS 309

Query: 384 KLSACAHLYLCVIYKLQKKDRIAAKHLLQVFCDSPFPARTTLLPELWDDIFLPHLSHLKA 205
            LSAC HLYL VIY+LQKK+RI AKHLLQ+FCDSPF ARTTL+PELW+++F PHLSHL++
Sbjct: 310 VLSACGHLYLSVIYQLQKKERIVAKHLLQMFCDSPFSARTTLVPELWENVFHPHLSHLES 369

Query: 204 WYNQEADSLANALSKGRKLKLLEKVYNEIMDSGTYQFAAYYKDWLTEGVEA 52
           WYNQE +SLA+     RKLK L+KVY +I+DSGTYQFA YYKDW+T+GVEA
Sbjct: 370 WYNQEVNSLADDPHNTRKLKQLKKVYYDILDSGTYQFALYYKDWITDGVEA 420


>ref|XP_002528126.1| hypothetical protein RCOM_0146510 [Ricinus communis]
            gi|223532465|gb|EEF34256.1| hypothetical protein
            RCOM_0146510 [Ricinus communis]
          Length = 1050

 Score =  341 bits (875), Expect = 1e-91
 Identities = 180/291 (61%), Positives = 221/291 (75%), Gaps = 3/291 (1%)
 Frame = -2

Query: 915  GKNMQVDKRYSNNSNKSLLGRMS---STLNNRKSMKQPXXXXXXXXXXXXXNKSLDESKN 745
            G N+ VD+R+S NS+KSLL   +   S++N                      K + + + 
Sbjct: 172  GNNVIVDERHSRNSSKSLLKYTAFEDSSINPSYDSS---------VRSSKIVKRVKDDER 222

Query: 744  RRQAEIEQALAEPALDEVAVQAMISILTGYIKRFLKDDDFRTSLRHSCFASLNFVGLEEG 565
             R     QA+++ ALD+VAV+AM+SIL GYIKRFL+D++FRT+LRH+CF+SL F G  EG
Sbjct: 223  TRCETASQAVSDIALDKVAVKAMVSILNGYIKRFLRDEEFRTTLRHNCFSSLMFNG--EG 280

Query: 564  FNTESKVIDNLEQAIGTVERAAEDSASAKELKKASLQLSVITGLNSNDLKDGFTSGIPNS 385
             + +SKVI NLEQAI TVE+A E++AS K+LK+A+LQLSVIT LNSNDL+DG TSGIPN 
Sbjct: 281  DSIKSKVITNLEQAIETVEKATEEAASTKDLKRAALQLSVITSLNSNDLEDGHTSGIPNF 340

Query: 384  KLSACAHLYLCVIYKLQKKDRIAAKHLLQVFCDSPFPARTTLLPELWDDIFLPHLSHLKA 205
            +LSACAHLY  VIYKLQKKDR ++K+LLQVFCDSPF ART LLPELWD +F PHLSH+K 
Sbjct: 341  RLSACAHLYRSVIYKLQKKDRASSKYLLQVFCDSPFSARTILLPELWDFLFFPHLSHMKE 400

Query: 204  WYNQEADSLANALSKGRKLKLLEKVYNEIMDSGTYQFAAYYKDWLTEGVEA 52
            WYNQEADSL N  SK +KL+LL+KVYNE +DSGTYQFA YYKDWLTEGVEA
Sbjct: 401  WYNQEADSLLNTPSKIKKLELLDKVYNETLDSGTYQFAVYYKDWLTEGVEA 451


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