BLASTX nr result

ID: Panax21_contig00028488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028488
         (2107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305323.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-10
ref|XP_002524369.1| ankyrin repeat-containing protein, putative ...    67   2e-08
ref|XP_002875477.1| hypothetical protein ARALYDRAFT_484658 [Arab...    62   5e-07
ref|NP_189530.2| Ankyrin repeat family protein [Arabidopsis thal...    60   2e-06
gb|EEE62169.1| hypothetical protein OsJ_16956 [Oryza sativa Japo...    60   3e-06

>ref|XP_002305323.1| predicted protein [Populus trichocarpa] gi|222848287|gb|EEE85834.1|
            predicted protein [Populus trichocarpa]
          Length = 1097

 Score = 72.0 bits (175), Expect = 6e-10
 Identities = 68/247 (27%), Positives = 117/247 (47%)
 Frame = +3

Query: 591  ENANIKKQQQQPNLRIWMDDELGKALEEDDREEFLSVIDRKLDFFHSRQQLLHAVCGYGS 770
            + A   K  + PN  + ++  + K++ ED++ + LS+  + +       +LLH  C + S
Sbjct: 18   KTAASSKDHEFPNAEV-LETSVIKSVLEDNKLQLLSLSKKVVTERTIITKLLHLCCTFDS 76

Query: 771  IKCAEALLKGDTRLTVELNHPCTDTGLYPLHCAALSLFPSIVELFIYYGARTDIEFRPCN 950
            + CA +LL G+      +N P   TGL PLH AA +     VE+ +   ARTD+E R   
Sbjct: 77   VDCATSLLNGEFGSVPVINEP-DSTGLSPLHAAATANAARCVEMLLEKHARTDLESRD-- 133

Query: 951  PLDIYPQHLVEAHARKLPLHMALLAISRLPCIKEWSPKHTIAKLVTLLCLPRMQNPLETL 1130
                          R LPL ++ L  +R   + +     TI  LV  +     +  L TL
Sbjct: 134  ------------GRRLLPLELS-LCNTRKDLLWDLDDNSTIEDLVVQI----SEKDLTTL 176

Query: 1131 NLLVRTTQDLEYVENEFTQLAIDGKVVEFAAMLSVANMKLSDIKGEVYEIIEGSIDDEDP 1310
             LL   T+++  V     ++A  G+VV+ AA+L VA  K+++    +  + +  +D ++ 
Sbjct: 177  KLLADKTEEIGDVA---YRMAEAGRVVDLAALLVVAADKINE---SILPVRDAVLDCKEK 230

Query: 1311 TPNAESV 1331
            T   E+V
Sbjct: 231  TTIYEAV 237


>ref|XP_002524369.1| ankyrin repeat-containing protein, putative [Ricinus communis]
            gi|223536330|gb|EEF37980.1| ankyrin repeat-containing
            protein, putative [Ricinus communis]
          Length = 707

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 60/214 (28%), Positives = 107/214 (50%), Gaps = 2/214 (0%)
 Frame = +3

Query: 642  MDDELGKALEEDDREEFLSVIDRKLDFFH-SRQQLLHAVCGYGSIKCAEALLKGDTRLTV 818
            ++ +L KA+ +DD+ +  S+     +    S  +LLH  C + S+ CA +L+ G      
Sbjct: 26   LETKLIKAIIQDDKSQLFSLSTTSNNTSPISISKLLHLCCSFDSVNCATSLVNGSPTSVN 85

Query: 819  ELNHPCTDTGLYPLHCAALSLFPSIVELFIYYGARTDIEFRPCNPLDIYPQHLVEAHARK 998
            E++     +G  PLH AA +     VE+ +   ARTD++ R  + L              
Sbjct: 86   EVD----ASGTSPLHAAAEAHASRCVEMLLRKRARTDLKTRDGHGL-------------- 127

Query: 999  LPLHMALLAISRLPCIKEWSP-KHTIAKLVTLLCLPRMQNPLETLNLLVRTTQDLEYVEN 1175
            LPL ++L   +R+  I  W P  H+I +L+  L     +  L T+ LL   T++++ V  
Sbjct: 128  LPLELSLYR-TRMDVI--WDPDNHSIEELLVQL----NEKDLTTIQLLSEKTKEIDDVA- 179

Query: 1176 EFTQLAIDGKVVEFAAMLSVANMKLSDIKGEVYE 1277
                 A+ G+VV+ AA+L VA  K++++  E+++
Sbjct: 180  --YACAVGGRVVDLAALLVVAPQKMNELILELHD 211


>ref|XP_002875477.1| hypothetical protein ARALYDRAFT_484658 [Arabidopsis lyrata subsp.
            lyrata] gi|297321315|gb|EFH51736.1| hypothetical protein
            ARALYDRAFT_484658 [Arabidopsis lyrata subsp. lyrata]
          Length = 780

 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 70/269 (26%), Positives = 113/269 (42%), Gaps = 7/269 (2%)
 Frame = +3

Query: 540  VEAYINELKNETEGLKEENANIKKQQQQPNLRIWMDDELGKALEEDDREEFLSVIDRKLD 719
            V++Y+ EL NE   +++  A             ++D  L     +D++ EF+S   R L 
Sbjct: 44   VDSYVTELDNEE--IRDNYA-------------FLDSVL-----KDNKSEFISHAKRILV 83

Query: 720  FFHSRQQ------LLHAVCGYGSIKCAEALLKGDTRLTVELNHPCTDTGLYPLHCAALSL 881
               +  +      LL A C Y SI CA +++ GD      +N  C+DTGL PLH AA   
Sbjct: 84   GEDAESERIEAIKLLSACCSYDSINCASSIINGDVGSVPYINDVCSDTGLSPLHTAAEYN 143

Query: 882  FPSIVELFIYYGARTDIEFRPCNPLDIYPQHLVEAHARKLPLHMALLAISRLPCIKEW-S 1058
                VE+ +   ARTD+  +    L              +PL    L++S       W +
Sbjct: 144  ALRCVEMLLKRRARTDMRSKDERAL--------------IPLE---LSLSNGSIDVTWNA 186

Query: 1059 PKHTIAKLVTLLCLPRMQNPLETLNLLVRTTQDLEYVENEFTQLAIDGKVVEFAAMLSVA 1238
               +I  L+ LL        L  + LL   T++++ V   + +    G++V   A+L VA
Sbjct: 187  SSDSIGDLIVLL----GDKDLTVVKLLAEKTKEVDAVAFAYAKA---GEIVSLTALLIVA 239

Query: 1239 NMKLSDIKGEVYEIIEGSIDDEDPTPNAE 1325
            + K       + E      DD+D  P  +
Sbjct: 240  SEK-------IREATVALRDDDDSVPKCK 261


>ref|NP_189530.2| Ankyrin repeat family protein [Arabidopsis thaliana]
            gi|332643979|gb|AEE77500.1| Ankyrin repeat family protein
            [Arabidopsis thaliana]
          Length = 772

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 6/227 (2%)
 Frame = +3

Query: 672  EDDREEFLSVIDRKLDFFHSRQQ------LLHAVCGYGSIKCAEALLKGDTRLTVELNHP 833
            +D++ +F+S   R L    +  +      LL A C Y SI CA +++ GD      +N  
Sbjct: 72   KDNKSQFISYAKRILVGEDAESERIEDLKLLTACCSYDSINCASSIINGDVGSVPYINDI 131

Query: 834  CTDTGLYPLHCAALSLFPSIVELFIYYGARTDIEFRPCNPLDIYPQHLVEAHARKLPLHM 1013
            C+DTGL  LH AA S  P  VE+ +   ARTD+  +    L              +PL +
Sbjct: 132  CSDTGLSLLHTAAESHAPLCVEMLLKRRARTDMRSKDERAL--------------IPLEL 177

Query: 1014 ALLAISRLPCIKEWSPKHTIAKLVTLLCLPRMQNPLETLNLLVRTTQDLEYVENEFTQLA 1193
            +L  +                +L+ LL        L  + LL   T++++ V   + +  
Sbjct: 178  SLSNV----------------RLIVLL----GDKDLTVVKLLAEKTKEVDVVAYAYAKA- 216

Query: 1194 IDGKVVEFAAMLSVANMKLSDIKGEVYEIIEGSIDDEDPTPNAESVR 1334
              G++V   A+L VA+       G++ E      DD+D    A+  R
Sbjct: 217  --GEIVSLTALLIVAS-------GKIREATVALRDDDDDDSVAKRER 254


>gb|EEE62169.1| hypothetical protein OsJ_16956 [Oryza sativa Japonica Group]
          Length = 560

 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 16/219 (7%)
 Frame = +3

Query: 642  MDDELGKALEEDDREEFLSVIDRKLDFFH----SRQQLLHAVCGYGSIKCAEALLKGDTR 809
            +  ELG  L+ D    FL +    LD          Q    +  + +++CA+ +L+G   
Sbjct: 97   ISSELGLILKRDSVRSFLRLYGENLDCMAWGLIITPQTFDFIVAHNALRCAKVVLEGKAP 156

Query: 810  LTVEL--NHPC-TDTGLYPLHCAALSLFPSIVELFIYYGARTDIEFRPCNPLDIYPQHLV 980
               E+  N  C ++ G +PLH AA +    +++L + YGA  ++            Q ++
Sbjct: 157  KLYEMRANPNCMSNYGYFPLHQAAETFSVDMIKLLLRYGASANLRTSG--------QKVI 208

Query: 981  EAHARKLPLHMALLAISRLPCIKE---WSPKHT------IAKLVTLLCLPRMQNPLETLN 1133
            E     LPLH+A+        +++      KH       I KLV LLCLP M+  L+T  
Sbjct: 209  EG---LLPLHVAIENTCMHKYLEDNLLTDQKHKQVDFDFIYKLVHLLCLPEMKIFLDTTR 265

Query: 1134 LLVRTTQDLEYVENEFTQLAIDGKVVEFAAMLSVANMKL 1250
            LL   T +   V +E      +GK+V  A +L  A  K+
Sbjct: 266  LLADYTDN---VLDELWNYIKEGKLVHAAILLLAAQRKI 301


Top