BLASTX nr result

ID: Panax21_contig00027988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027988
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553837.1| PREDICTED: membrane steroid-binding protein ...   128   6e-28
ref|XP_002523648.1| steroid binding protein, putative [Ricinus c...   127   9e-28
ref|XP_002321821.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26
gb|ACN40048.1| unknown [Picea sitchensis] gi|224284943|gb|ACN402...   115   4e-24
gb|ABK23222.1| unknown [Picea sitchensis]                             115   4e-24

>ref|XP_003553837.1| PREDICTED: membrane steroid-binding protein 2-like [Glycine max]
          Length = 200

 Score =  128 bits (321), Expect = 6e-28
 Identities = 68/109 (62%), Positives = 81/109 (74%), Gaps = 9/109 (8%)
 Frame = +1

Query: 103 MGLYTVVMDPITHYTGLSPAAFFTIVALMVVVYKVVCGMFFAADDY----MAVKRSNDFV 270
           MGLYT VM+ I+ YTGLSPAAFFTI+A+MVVVY+ V GMF + +DY    +   R+N  +
Sbjct: 1   MGLYTSVMEEISFYTGLSPAAFFTILAMMVVVYRTVSGMFVSPEDYNKPPVVSARANSRL 60

Query: 271 -----LREPVQLGEVTEEELMVYDGSDPNKPLLMAIKGQIYDVSRSRMF 402
                 REPVQLGE+T+ EL  YDGSDP+KPLLMAIKGQIYDVS  R F
Sbjct: 61  DESEPPREPVQLGEITDRELRAYDGSDPSKPLLMAIKGQIYDVSNGRNF 109


>ref|XP_002523648.1| steroid binding protein, putative [Ricinus communis]
           gi|223537100|gb|EEF38734.1| steroid binding protein,
           putative [Ricinus communis]
          Length = 197

 Score =  127 bits (319), Expect = 9e-28
 Identities = 69/108 (63%), Positives = 80/108 (74%), Gaps = 8/108 (7%)
 Frame = +1

Query: 103 MGLYTVVMDPITHYTGLSPAAFFTIVALMVVVYKVVCGMFFAADDYMAVKRSNDFV---- 270
           M  Y++VMD I  YTGLSPAAFFTI ALMVVVYK+VC MF   ++    K SN+ +    
Sbjct: 1   MATYSIVMDSIEGYTGLSPAAFFTIAALMVVVYKMVCSMFVDPEELHNHKLSNNHINDQT 60

Query: 271 ---LREPVQLGE-VTEEELMVYDGSDPNKPLLMAIKGQIYDVSRSRMF 402
              + EPVQLG+ VTE+EL  YDGSDP+KPLLMAIKGQIYDVS SRMF
Sbjct: 61  TPRILEPVQLGDYVTEQELRAYDGSDPSKPLLMAIKGQIYDVSSSRMF 108


>ref|XP_002321821.1| predicted protein [Populus trichocarpa] gi|222868817|gb|EEF05948.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  122 bits (305), Expect = 4e-26
 Identities = 63/99 (63%), Positives = 74/99 (74%), Gaps = 6/99 (6%)
 Frame = +1

Query: 124 MDPITHYTGLSPAAFFTIVALMVVVYKVVCGMFFAADDYMAVK------RSNDFVLREPV 285
           M+ +  YTGLSPAAFFTI A+MVVVYK+VC MF   +D    +      +     ++EPV
Sbjct: 1   METMEAYTGLSPAAFFTIAAVMVVVYKIVCSMFVDPEDIATNQPPPPQPQPQPPTIQEPV 60

Query: 286 QLGEVTEEELMVYDGSDPNKPLLMAIKGQIYDVSRSRMF 402
           QLG+VTEEEL  YDGSDPNKPLLMAIKG+IYDVSRSRMF
Sbjct: 61  QLGDVTEEELRAYDGSDPNKPLLMAIKGKIYDVSRSRMF 99


>gb|ACN40048.1| unknown [Picea sitchensis] gi|224284943|gb|ACN40201.1| unknown
           [Picea sitchensis] gi|224285699|gb|ACN40565.1| unknown
           [Picea sitchensis]
          Length = 262

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/100 (59%), Positives = 73/100 (73%)
 Frame = +1

Query: 103 MGLYTVVMDPITHYTGLSPAAFFTIVALMVVVYKVVCGMFFAADDYMAVKRSNDFVLREP 282
           MGL+  +M+ I  YTGL+P  FFT+VA++V VY +V GMF     +++ +      L  P
Sbjct: 1   MGLWGALMEAIPAYTGLTPVTFFTLVAVLVGVYNLVSGMFAGPPQHVSREAVAMEPLPPP 60

Query: 283 VQLGEVTEEELMVYDGSDPNKPLLMAIKGQIYDVSRSRMF 402
           VQLGEVTEEEL  YDGSDP KPLLMAIKGQIYDV++SRMF
Sbjct: 61  VQLGEVTEEELKAYDGSDPKKPLLMAIKGQIYDVTQSRMF 100


>gb|ABK23222.1| unknown [Picea sitchensis]
          Length = 262

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/100 (59%), Positives = 73/100 (73%)
 Frame = +1

Query: 103 MGLYTVVMDPITHYTGLSPAAFFTIVALMVVVYKVVCGMFFAADDYMAVKRSNDFVLREP 282
           MGL+  +M+ I  YTGL+P  FFT+VA++V VY +V GMF     +++ +      L  P
Sbjct: 1   MGLWGALMEAIPAYTGLTPVTFFTLVAVLVGVYNLVSGMFAGPPQHVSREAVAMEPLPPP 60

Query: 283 VQLGEVTEEELMVYDGSDPNKPLLMAIKGQIYDVSRSRMF 402
           VQLGEVTEEEL  YDGSDP KPLLMAIKGQIYDV++SRMF
Sbjct: 61  VQLGEVTEEELKAYDGSDPKKPLLMAIKGQIYDVTQSRMF 100


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