BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027896
         (905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containi...   286   4e-75
ref|XP_002869525.1| pentatricopeptide repeat-containing protein ...   233   4e-59
ref|NP_194530.1| pentatricopeptide repeat-containing protein [Ar...   226   4e-57
gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]             226   6e-57
ref|XP_003623229.1| Pentatricopeptide repeat-containing protein ...   223   4e-56

>ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  286 bits (733), Expect = 4e-75
 Identities = 143/263 (54%), Positives = 187/263 (71%)
 Frame = +1

Query: 115 VDTQLRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFKVCYR 294
           ++TQLR LC+K NSQ  +AVSLF+  +D  L PS  +CNFLV  LAR+  Y L F V  R
Sbjct: 40  LETQLRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRR 99

Query: 295 MSQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKNE 474
           M+ V VLP+F SL ALIE F  + KP+   GVVGL+LKRG+ VN+++ N++LKG C    
Sbjct: 100 MTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGG 159

Query: 475 VVKATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLVTYTV 654
           V +A    RE  +  V PDIVS+NTLI GLCKAKKL+EA  L +EMEA  C P+ VT T 
Sbjct: 160 VFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTT 219

Query: 655 LIDGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSKG 834
           L+DGLCK+GRMDEAM LL+ M+ KG D DVV+Y  LI G C +G++++G+EL ++ML KG
Sbjct: 220 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 279

Query: 835 ISPNVNMYNNLMYGLRKMGKSKE 903
           IS NV  Y+ L++GL ++G+ KE
Sbjct: 280 ISANVVTYSCLVHGLCRLGQWKE 302



 Score =  132 bits (332), Expect = 1e-28
 Identities = 80/259 (30%), Positives = 132/259 (50%)
 Frame = +1

Query: 127 LRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFKVCYRMSQV 306
           L+GLC   N  + +A+ L   +    ++P  +S N L+  L +  +      +   M   
Sbjct: 151 LKGLCR--NGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAA 208

Query: 307 GVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKNEVVKA 486
           G  PN ++   L++   + G+ + A  ++  + K+G++ ++ L   ++ GFC    + + 
Sbjct: 209 GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 268

Query: 487 TEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLVTYTVLIDG 666
            E F E     +  ++V+++ L+ GLC+  + +EA  +   M      PD+VTYT LIDG
Sbjct: 269 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 328

Query: 667 LCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSKGISPN 846
           LCK+GR   AM LL+ M  KG +   V Y+ L+ GLC  G V    ++L  M+ KG   +
Sbjct: 329 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 388

Query: 847 VNMYNNLMYGLRKMGKSKE 903
           V  YN LM GL   GK  E
Sbjct: 389 VVTYNTLMKGLCDKGKVDE 407



 Score =  127 bits (320), Expect = 3e-27
 Identities = 79/266 (29%), Positives = 133/266 (50%), Gaps = 2/266 (0%)
 Frame = +1

Query: 103 DLHKVDTQLRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFK 282
           D+   +T + GLC+    +L +AV L   +  +G  P+ ++C  L+  L ++   +   +
Sbjct: 178 DIVSYNTLINGLCKAK--KLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAME 235

Query: 283 VCYRMSQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFC 462
           +   M + G   + +  G LI  F  +G  +    +   +L +G + N+   + ++ G C
Sbjct: 236 LLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLC 295

Query: 463 LKNEVVKATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLV 642
              +  +A       +++ + PD+V++  LI GLCK  +   A DL   M      P  V
Sbjct: 296 RLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV 355

Query: 643 TYTVLIDGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDM 822
           TY VL+ GLCKEG + +A  +L  M  KG   DVV Y+ L++GLC  G V++  +L N M
Sbjct: 356 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 415

Query: 823 LSKG--ISPNVNMYNNLMYGLRKMGK 894
                 + PNV  +N L+ GL K G+
Sbjct: 416 FDNENCLEPNVFTFNMLIGGLCKEGR 441



 Score =  116 bits (291), Expect = 6e-24
 Identities = 73/269 (27%), Positives = 135/269 (50%), Gaps = 2/269 (0%)
 Frame = +1

Query: 103  DLHKVDTQLRGLCEKSNSQLIDAVSLFYHVVDSG--LTPSGLSCNFLVQTLARNNEYNLV 276
            D+   +T ++GLC+K   ++ +A+ LF  + D+   L P+  + N L+  L +       
Sbjct: 388  DVVTYNTLMKGLCDKG--KVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKA 445

Query: 277  FKVCYRMSQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKG 456
             K+  +M + G   N ++   L+   +++GK + A  +   +L  G+  N +  ++++ G
Sbjct: 446  VKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDG 505

Query: 457  FCLKNEVVKATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPD 636
            FC    +  A   F E   + + P +  +NTL+  LCK   LE+A  L  EM   NC PD
Sbjct: 506  FCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPD 565

Query: 637  LVTYTVLIDGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLN 816
            ++++  +IDG  K G       L  +M   GL  D + +  LI  L   G++++ +  L 
Sbjct: 566  IISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALE 625

Query: 817  DMLSKGISPNVNMYNNLMYGLRKMGKSKE 903
             M++ G +P+  +Y++L+ GL   G + E
Sbjct: 626  RMVASGFTPDALVYDSLLKGLSSKGDTTE 654



 Score =  107 bits (267), Expect = 4e-21
 Identities = 66/234 (28%), Positives = 116/234 (49%)
 Frame = +1

Query: 133  GLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFKVCYRMSQVGV 312
            GLC++   +L  AV +   +V  G   + ++ N L+    +  +     ++  ++  +G 
Sbjct: 435  GLCKEG--RLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGF 492

Query: 313  LPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKNEVVKATE 492
            +PN  +   LI+ F +      A G+   +   G N  ++  N ++   C +  + +A  
Sbjct: 493  VPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKS 552

Query: 493  FFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLVTYTVLIDGLC 672
             F+E       PDI+SFNT+I G  KA   +   +L+++M      PD +T++ LI+ L 
Sbjct: 553  LFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLS 612

Query: 673  KEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSKG 834
            K G +DEA   L+ M   G   D +VYD+L++GL   GD  +   LL+ M +KG
Sbjct: 613  KLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 666



 Score = 69.7 bits (169), Expect = 9e-10
 Identities = 56/229 (24%), Positives = 96/229 (41%)
 Frame = +1

Query: 127  LRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFKVCYRMSQV 306
            L G C K+  ++ +A+ L+  V+D G  P+  + + L+    +    N+   +   M   
Sbjct: 467  LLGGCLKAG-KIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 525

Query: 307  GVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKNEVVKA 486
            G+ P       L+    + G  E A  +   +       +I   N ++ G     +    
Sbjct: 526  GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 585

Query: 487  TEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLVTYTVLIDG 666
             E   +  +  + PD ++F+TLI  L K  +L+EA      M A    PD + Y  L+ G
Sbjct: 586  KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 645

Query: 667  LCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELL 813
            L  +G   E + LL +M  KG  +D  +   ++  LC S       ELL
Sbjct: 646  LSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 694


>ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315361|gb|EFH45784.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 707

 Score =  233 bits (595), Expect = 4e-59
 Identities = 120/271 (44%), Positives = 174/271 (64%)
 Frame = +1

Query: 91  KPTDDLHKVDTQLRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYN 270
           K  +   + +T+LR LCE SN QL +AVS+F   VDSG + S  + N L+ TL R+  + 
Sbjct: 31  KLVNTFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGGSLS-FAGNNLMATLVRSRNHE 89

Query: 271 LVFKVCYRMSQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVIL 450
           + F    +M +     NF+SL  L+E F+Q  K  FA GV+ L+LKRG+  N+Y  N++L
Sbjct: 90  VAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILL 149

Query: 451 KGFCLKNEVVKATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCA 630
           KG C   E  KA    RE  +N + PD+VS+NT+I+G C+ K+LE+A  L  EM+   C+
Sbjct: 150 KGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCS 209

Query: 631 PDLVTYTVLIDGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQEL 810
             LVT+ +LID  CK G+MDEAMGLL EM+ KGL+ D++VY +LIRG C  G++++G+ L
Sbjct: 210 WSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKAL 269

Query: 811 LNDMLSKGISPNVNMYNNLMYGLRKMGKSKE 903
            +++L +G SP    YN L+ G  K+G+ KE
Sbjct: 270 FDEVLERGDSPCAITYNTLIRGFCKLGRLKE 300



 Score =  119 bits (297), Expect = 1e-24
 Identities = 77/267 (28%), Positives = 134/267 (50%)
 Frame = +1

Query: 103 DLHKVDTQLRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFK 282
           +++  +  L+GLC   N +   AVSL   +  + L P  +S N +++      E     +
Sbjct: 141 NVYNYNILLKGLCR--NLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQ 198

Query: 283 VCYRMSQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFC 462
           +   M   G   + ++ G LI+ F ++GK + A G++  +  +G   ++ +   +++GFC
Sbjct: 199 LANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFC 258

Query: 463 LKNEVVKATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLV 642
              E+ +    F E  +    P  +++NTLI+G CK  +L+EA ++   M      P++ 
Sbjct: 259 DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVY 318

Query: 643 TYTVLIDGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDM 822
           TYT LIDGLC  G+  EA+ LL+ M  K  + +VV Y+ +I  LC    V    E++  M
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELM 378

Query: 823 LSKGISPNVNMYNNLMYGLRKMGKSKE 903
             +   P+   YN+L+ GL   G   E
Sbjct: 379 KKRRTRPDNITYNSLLGGLCAKGDLDE 405



 Score =  110 bits (274), Expect = 6e-22
 Identities = 71/263 (26%), Positives = 134/263 (50%), Gaps = 2/263 (0%)
 Frame = +1

Query: 103 DLHKVDTQLRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFK 282
           D+   +T +RG CE    +L  A+ L   +  SG + S ++   L+    +  + +    
Sbjct: 176 DVVSYNTVIRGFCE--GKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMG 233

Query: 283 VCYRMSQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFC 462
           +   M   G+  + +   +LI  F   G+ +    +   +L+RG +      N +++GFC
Sbjct: 234 LLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293

Query: 463 LKNEVVKATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLV 642
               + +A+E F    +  V P++ ++  LI GLC   K +EA  L   M   +  P++V
Sbjct: 294 KLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVV 353

Query: 643 TYTVLIDGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDM 822
           TY ++I+ LCK+  + +A+ +++ M+ +    D + Y++L+ GLC  GD+++  +LL  M
Sbjct: 354 TYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLM 413

Query: 823 L--SKGISPNVNMYNNLMYGLRK 885
           L  S    P+V  +N L++GL K
Sbjct: 414 LKDSSYTDPDVISFNALIHGLCK 436



 Score =  100 bits (248), Expect = 6e-19
 Identities = 60/245 (24%), Positives = 123/245 (50%)
 Frame = +1

Query: 103  DLHKVDTQLRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFK 282
            D+   +  + GLC+   ++L  A+ ++  +V+       ++ N L+ +  ++ + N   +
Sbjct: 423  DVISFNALIHGLCK--GNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAME 480

Query: 283  VCYRMSQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFC 462
            +  ++S   ++PN  +   +I+ F ++G    A G++  +       +++  N +L   C
Sbjct: 481  LWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLC 540

Query: 463  LKNEVVKATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLV 642
             K  + +A   F E  ++  FPD++SFN +I G  KA  ++ A  L V M     +PDL 
Sbjct: 541  KKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLF 600

Query: 643  TYTVLIDGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDM 822
            TY+ LI+   K G +DEA+   D+M   G + D  + D++++     G+ +K  E +  +
Sbjct: 601  TYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKL 660

Query: 823  LSKGI 837
            + K +
Sbjct: 661  VDKDV 665



 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 2/254 (0%)
 Frame = +1

Query: 136  LCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFKVCYRMSQVGVL 315
            LC+  +S + DA+ +   +      P  ++ N L+  L    + +   K+ Y M +    
Sbjct: 362  LCK--DSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSY 419

Query: 316  --PNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKNEVVKAT 489
              P+ +S  ALI    +  +   A  +  L++++    +I   N++L       +V KA 
Sbjct: 420  TDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAM 479

Query: 490  EFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLVTYTVLIDGL 669
            E +++ S + + P+  ++ T+I G CK   L  A  L  +M      P +  Y  L+  L
Sbjct: 480  ELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSL 539

Query: 670  CKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSKGISPNV 849
            CK+G +D+A  L +EM+      DV+ ++ +I G   +GD++  + LL  M   G+SP++
Sbjct: 540  CKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDL 599

Query: 850  NMYNNLMYGLRKMG 891
              Y+ L+    K+G
Sbjct: 600  FTYSKLINRFLKLG 613



 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 77/298 (25%), Positives = 130/298 (43%), Gaps = 37/298 (12%)
 Frame = +1

Query: 118  DTQLRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFKVCYRM 297
            +T +RG C+    +L +A  +F  +++ G+ P+  +   L+  L    +     ++   M
Sbjct: 286  NTLIRGFCKLG--RLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343

Query: 298  SQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKNEV 477
             Q    PN ++   +I    +      A  +V L+ KR    +    N +L G C K ++
Sbjct: 344  LQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDL 403

Query: 478  VKATEFFREFSKNVVF--PDIVSFNTLIKGLCKAKKLEEA---FDLKVE----------- 609
             +A++      K+  +  PD++SFN LI GLCK  +L +A   +DL VE           
Sbjct: 404  DEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTN 463

Query: 610  ---------------------MEACNCAPDLVTYTVLIDGLCKEGRMDEAMGLLDEMRMK 726
                                 +      P+  TYT +IDG CK G ++ A GLL +MR+ 
Sbjct: 464  ILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLS 523

Query: 727  GLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSKGISPNVNMYNNLMYGLRKMGKSK 900
             L   V  Y+ L+  LC  G +++   L  +M      P+V  +N ++ G  K G  K
Sbjct: 524  ELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIK 581



 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 60/250 (24%), Positives = 112/250 (44%), Gaps = 2/250 (0%)
 Frame = +1

Query: 127  LRGLCEKSNSQLIDAVSLFYHVV-DSGLT-PSGLSCNFLVQTLARNNEYNLVFKVCYRMS 300
            L GLC K +  L +A  L Y ++ DS  T P  +S N L+  L + N  +    +   + 
Sbjct: 394  LGGLCAKGD--LDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLV 451

Query: 301  QVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKNEVV 480
            +     + ++   L+   ++SG    A  +   I       N      ++ GFC    + 
Sbjct: 452  EKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLN 511

Query: 481  KATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLVTYTVLI 660
             A     +   + + P +  +N L+  LCK   L++A+ L  EM+  +  PD++++ ++I
Sbjct: 512  VAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMI 571

Query: 661  DGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSKGIS 840
            DG  K G +  A  LL  M   GL  D+  Y  LI      G +++     + M+  G  
Sbjct: 572  DGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFE 631

Query: 841  PNVNMYNNLM 870
            P+ ++ ++++
Sbjct: 632  PDAHICDSVL 641


>ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g28010 gi|4455360|emb|CAB36770.1| putative protein
           [Arabidopsis thaliana] gi|7269655|emb|CAB79603.1|
           putative protein [Arabidopsis thaliana]
           gi|332660020|gb|AEE85420.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  226 bits (577), Expect = 4e-57
 Identities = 115/264 (43%), Positives = 168/264 (63%)
 Frame = +1

Query: 112 KVDTQLRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFKVCY 291
           + +T+LR LCE SN QL +AVS+F   VDSG +    + N L+  L R+  + L F    
Sbjct: 38  ETETKLRSLCEDSNPQLKNAVSVFQQAVDSG-SSLAFAGNNLMAKLVRSRNHELAFSFYR 96

Query: 292 RMSQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKN 471
           +M +     NF+SL  L+E ++Q  K  FA GV+ L+LKRG+  N+Y  N++LKG C   
Sbjct: 97  KMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNL 156

Query: 472 EVVKATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLVTYT 651
           E  KA    RE  +N + PD+ S+NT+I+G C+ K+LE+A +L  EM+   C+  LVT+ 
Sbjct: 157 ECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWG 216

Query: 652 VLIDGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSK 831
           +LID  CK G+MDEAMG L EM+  GL+ D+VVY +LIRG C  G++++G+ L +++L +
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276

Query: 832 GISPNVNMYNNLMYGLRKMGKSKE 903
           G SP    YN L+ G  K+G+ KE
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKE 300



 Score =  111 bits (278), Expect = 2e-22
 Identities = 77/259 (29%), Positives = 126/259 (48%)
 Frame = +1

Query: 127 LRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFKVCYRMSQV 306
           L+GLC   N +   AVSL   +  + L P   S N +++      E     ++   M   
Sbjct: 149 LKGLCR--NLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGS 206

Query: 307 GVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKNEVVKA 486
           G   + ++ G LI+ F ++GK + A G +  +   G   ++ +   +++GFC   E+ + 
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266

Query: 487 TEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLVTYTVLIDG 666
              F E  +    P  +++NTLI+G CK  +L+EA ++   M      P++ TYT LIDG
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326

Query: 667 LCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSKGISPN 846
           LC  G+  EA+ LL+ M  K  + + V Y+ +I  LC  G V    E++  M  +   P+
Sbjct: 327 LCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386

Query: 847 VNMYNNLMYGLRKMGKSKE 903
              YN L+ GL   G   E
Sbjct: 387 NITYNILLGGLCAKGDLDE 405



 Score =  111 bits (277), Expect = 3e-22
 Identities = 73/263 (27%), Positives = 134/263 (50%), Gaps = 2/263 (0%)
 Frame = +1

Query: 103 DLHKVDTQLRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFK 282
           D+   +T +RG CE    +L  A+ L   +  SG + S ++   L+    +  + +    
Sbjct: 176 DVFSYNTVIRGFCE--GKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMG 233

Query: 283 VCYRMSQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFC 462
               M  +G+  + +   +LI  F   G+ +    +   +L+RG +      N +++GFC
Sbjct: 234 FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293

Query: 463 LKNEVVKATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLV 642
              ++ +A+E F    +  V P++ ++  LI GLC   K +EA  L   M   +  P+ V
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV 353

Query: 643 TYTVLIDGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDM 822
           TY ++I+ LCK+G + +A+ +++ M+ +    D + Y+ L+ GLC  GD+++  +LL  M
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413

Query: 823 L--SKGISPNVNMYNNLMYGLRK 885
           L  S    P+V  YN L++GL K
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCK 436



 Score =  100 bits (249), Expect = 5e-19
 Identities = 63/246 (25%), Positives = 122/246 (49%), Gaps = 1/246 (0%)
 Frame = +1

Query: 103  DLHKVDTQLRGLCEKSN-SQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVF 279
            D+   +  + GLC+++   Q +D   L    + +G     ++ N L+ +  +  + N   
Sbjct: 423  DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG---DRVTTNILLNSTLKAGDVNKAM 479

Query: 280  KVCYRMSQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGF 459
            ++  ++S   ++ N  +  A+I+ F ++G    A G++  +       +++  N +L   
Sbjct: 480  ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539

Query: 460  CLKNEVVKATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDL 639
            C +  + +A   F E  ++  FPD+VSFN +I G  KA  ++ A  L V M     +PDL
Sbjct: 540  CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599

Query: 640  VTYTVLIDGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLND 819
             TY+ LI+   K G +DEA+   D+M   G + D  + D++++     G+ +K  EL+  
Sbjct: 600  FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKK 659

Query: 820  MLSKGI 837
            ++ K I
Sbjct: 660  LVDKDI 665



 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 79/298 (26%), Positives = 133/298 (44%), Gaps = 37/298 (12%)
 Frame = +1

Query: 118  DTQLRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFKVCYRM 297
            +T +RG C+    QL +A  +F  +++ G+ P+  +   L+  L    +     ++   M
Sbjct: 286  NTLIRGFCKLG--QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343

Query: 298  SQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKNEV 477
             +    PN ++   +I    + G    A  +V L+ KR    +    N++L G C K ++
Sbjct: 344  IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403

Query: 478  VKATEFFREFSKNVVF--PDIVSFNTLIKGLCKAKKLEEA---FDLKVEMEAC------- 621
             +A++      K+  +  PD++S+N LI GLCK  +L +A   +DL VE           
Sbjct: 404  DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463

Query: 622  ------------NCAPDLV-------------TYTVLIDGLCKEGRMDEAMGLLDEMRMK 726
                        N A +L              TYT +IDG CK G ++ A GLL +MR+ 
Sbjct: 464  ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523

Query: 727  GLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSKGISPNVNMYNNLMYGLRKMGKSK 900
             L   V  Y+ L+  LC  G +++   L  +M      P+V  +N ++ G  K G  K
Sbjct: 524  ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIK 581



 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 62/244 (25%), Positives = 113/244 (46%), Gaps = 2/244 (0%)
 Frame = +1

Query: 166  DAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFKVCYRMSQVGVL--PNFLSLGA 339
            DAV +   +      P  ++ N L+  L    + +   K+ Y M +      P+ +S  A
Sbjct: 370  DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429

Query: 340  LIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKNEVVKATEFFREFSKNV 519
            LI    +  +   A  +  L++++    +    N++L       +V KA E +++ S + 
Sbjct: 430  LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489

Query: 520  VFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLVTYTVLIDGLCKEGRMDEAM 699
            +  +  ++  +I G CK   L  A  L  +M      P +  Y  L+  LCKEG +D+A 
Sbjct: 490  IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549

Query: 700  GLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSKGISPNVNMYNNLMYGL 879
             L +EM+      DVV ++ +I G   +GD++  + LL  M   G+SP++  Y+ L+   
Sbjct: 550  RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609

Query: 880  RKMG 891
             K+G
Sbjct: 610  LKLG 613



 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 2/250 (0%)
 Frame = +1

Query: 127  LRGLCEKSNSQLIDAVSLFYHVV-DSGLT-PSGLSCNFLVQTLARNNEYNLVFKVCYRMS 300
            L GLC K +  L +A  L Y ++ DS  T P  +S N L+  L + N  +    +   + 
Sbjct: 394  LGGLCAKGD--LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV 451

Query: 301  QVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKNEVV 480
            +     + ++   L+   +++G    A  +   I       N      ++ GFC    + 
Sbjct: 452  EKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLN 511

Query: 481  KATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLVTYTVLI 660
             A     +   + + P +  +N L+  LCK   L++A+ L  EM+  N  PD+V++ ++I
Sbjct: 512  VAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMI 571

Query: 661  DGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSKGIS 840
            DG  K G +  A  LL  M   GL  D+  Y  LI      G +++     + M+  G  
Sbjct: 572  DGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE 631

Query: 841  PNVNMYNNLM 870
            P+ ++ ++++
Sbjct: 632  PDAHICDSVL 641


>gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  226 bits (576), Expect = 6e-57
 Identities = 114/264 (43%), Positives = 168/264 (63%)
 Frame = +1

Query: 112 KVDTQLRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFKVCY 291
           + +T+LR LCE SN QL +AVS+F   VDSG + +    N + + L R+  + L F    
Sbjct: 38  ETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGSNLMAK-LVRSRNHELAFSFYR 96

Query: 292 RMSQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKN 471
           +M +     NF+SL  L+E ++Q  K  FA GV+ L+LKRG+  N+Y  N++LKG C   
Sbjct: 97  KMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNL 156

Query: 472 EVVKATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLVTYT 651
           E  KA    RE  +N + PD+ S+NT+I+G C+ K+LE+A +L  EM+   C+  LVT+ 
Sbjct: 157 ECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWG 216

Query: 652 VLIDGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSK 831
           +LID  CK G+MDEAMG L EM+  GL+ D+VVY +LIRG C  G++++G+ L +++L +
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276

Query: 832 GISPNVNMYNNLMYGLRKMGKSKE 903
           G SP    YN L+ G  K+G+ KE
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKE 300



 Score =  108 bits (271), Expect = 1e-21
 Identities = 76/259 (29%), Positives = 125/259 (48%)
 Frame = +1

Query: 127 LRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFKVCYRMSQV 306
           L+GLC   N +   AVSL   +  + L P   S N +++      E     ++   M   
Sbjct: 149 LKGLCR--NLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGS 206

Query: 307 GVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKNEVVKA 486
           G   + ++ G LI+ F ++GK + A G +  +   G   ++ +   +++GFC   E+ + 
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266

Query: 487 TEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLVTYTVLIDG 666
              F E  +    P  +++NTLI+G CK  +L+EA ++   M      P++ TYT LIDG
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326

Query: 667 LCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSKGISPN 846
           LC  G+  EA+  L+ M  K  + + V Y+ +I  LC  G V    E++  M  +   P+
Sbjct: 327 LCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386

Query: 847 VNMYNNLMYGLRKMGKSKE 903
              YN L+ GL   G   E
Sbjct: 387 NITYNILLGGLCAKGDLDE 405



 Score =  100 bits (249), Expect = 5e-19
 Identities = 63/246 (25%), Positives = 122/246 (49%), Gaps = 1/246 (0%)
 Frame = +1

Query: 103  DLHKVDTQLRGLCEKSN-SQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVF 279
            D+   +  + GLC+++   Q +D   L    + +G     ++ N L+ +  +  + N   
Sbjct: 423  DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG---DRVTTNILLNSTLKAGDVNKAM 479

Query: 280  KVCYRMSQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGF 459
            ++  ++S   ++ N  +  A+I+ F ++G    A G++  +       +++  N +L   
Sbjct: 480  ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539

Query: 460  CLKNEVVKATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDL 639
            C +  + +A   F E  ++  FPD+VSFN +I G  KA  ++ A  L V M     +PDL
Sbjct: 540  CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599

Query: 640  VTYTVLIDGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLND 819
             TY+ LI+   K G +DEA+   D+M   G + D  + D++++     G+ +K  EL+  
Sbjct: 600  FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKK 659

Query: 820  MLSKGI 837
            ++ K I
Sbjct: 660  LVDKDI 665



 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 79/298 (26%), Positives = 132/298 (44%), Gaps = 37/298 (12%)
 Frame = +1

Query: 118  DTQLRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFKVCYRM 297
            +T +RG C+    QL +A  +F  +++ G+ P+  +   L+  L    +     +    M
Sbjct: 286  NTLIRGFCKLG--QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLM 343

Query: 298  SQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKNEV 477
             +    PN ++   +I    + G    A  +V L+ KR    +    N++L G C K ++
Sbjct: 344  IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403

Query: 478  VKATEFFREFSKNVVF--PDIVSFNTLIKGLCKAKKLEEA---FDLKVEMEAC------- 621
             +A++      K+  +  PD++S+N LI GLCK  +L +A   +DL VE           
Sbjct: 404  DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463

Query: 622  ------------NCAPDLV-------------TYTVLIDGLCKEGRMDEAMGLLDEMRMK 726
                        N A +L              TYT +IDG CK G ++ A GLL +MR+ 
Sbjct: 464  ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523

Query: 727  GLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSKGISPNVNMYNNLMYGLRKMGKSK 900
             L   V  Y+ L+  LC  G +++   L  +M      P+V  +N ++ G  K G  K
Sbjct: 524  ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIK 581



 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 62/244 (25%), Positives = 113/244 (46%), Gaps = 2/244 (0%)
 Frame = +1

Query: 166  DAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFKVCYRMSQVGVL--PNFLSLGA 339
            DAV +   +      P  ++ N L+  L    + +   K+ Y M +      P+ +S  A
Sbjct: 370  DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429

Query: 340  LIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKNEVVKATEFFREFSKNV 519
            LI    +  +   A  +  L++++    +    N++L       +V KA E +++ S + 
Sbjct: 430  LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489

Query: 520  VFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLVTYTVLIDGLCKEGRMDEAM 699
            +  +  ++  +I G CK   L  A  L  +M      P +  Y  L+  LCKEG +D+A 
Sbjct: 490  IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549

Query: 700  GLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSKGISPNVNMYNNLMYGL 879
             L +EM+      DVV ++ +I G   +GD++  + LL  M   G+SP++  Y+ L+   
Sbjct: 550  RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609

Query: 880  RKMG 891
             K+G
Sbjct: 610  LKLG 613



 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 2/250 (0%)
 Frame = +1

Query: 127  LRGLCEKSNSQLIDAVSLFYHVV-DSGLT-PSGLSCNFLVQTLARNNEYNLVFKVCYRMS 300
            L GLC K +  L +A  L Y ++ DS  T P  +S N L+  L + N  +    +   + 
Sbjct: 394  LGGLCAKGD--LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV 451

Query: 301  QVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKNEVV 480
            +     + ++   L+   +++G    A  +   I       N      ++ GFC    + 
Sbjct: 452  EKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLN 511

Query: 481  KATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLVTYTVLI 660
             A     +   + + P +  +N L+  LCK   L++A+ L  EM+  N  PD+V++ ++I
Sbjct: 512  VAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMI 571

Query: 661  DGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSKGIS 840
            DG  K G +  A  LL  M   GL  D+  Y  LI      G +++     + M+  G  
Sbjct: 572  DGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE 631

Query: 841  PNVNMYNNLM 870
            P+ ++ ++++
Sbjct: 632  PDAHICDSVL 641


>ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498244|gb|AES79447.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  223 bits (569), Expect = 4e-56
 Identities = 116/250 (46%), Positives = 159/250 (63%), Gaps = 2/250 (0%)
 Frame = +1

Query: 160 LIDAVSLFYHVVDS--GLTPSGLSCNFLVQTLARNNEYNLVFKVCYRMSQVGVLPNFLSL 333
           L +++S F+H +       PS  SCN L+  L +   Y+ V  V  +M+ V V P F SL
Sbjct: 38  LSESLSHFHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSL 97

Query: 334 GALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKNEVVKATEFFREFSK 513
            ALIE F+ + KP FA GV+GLI+KRG+++N+Y  N++LKGFC   +  KA + F    +
Sbjct: 98  SALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKR 157

Query: 514 NVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLVTYTVLIDGLCKEGRMDE 693
           N + PD VS+NT+I GLCK K+L EA +L  EM+   C P+ VT++ LIDG CK G ++E
Sbjct: 158 NCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEE 217

Query: 694 AMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSKGISPNVNMYNNLMY 873
             GLL+EM   GL+ DV VY  LI G C  GD+E+G+EL N+ML K ++PNV  Y+ LM 
Sbjct: 218 GFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMN 277

Query: 874 GLRKMGKSKE 903
            L K  K KE
Sbjct: 278 ALCKKQKWKE 287



 Score =  142 bits (357), Expect = 1e-31
 Identities = 82/267 (30%), Positives = 141/267 (52%)
 Frame = +1

Query: 103 DLHKVDTQLRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFK 282
           +++  +  L+G C+  +S    A+ LF  +  + L P  +S N ++  L +        +
Sbjct: 128 NVYNFNLLLKGFCQSGDSH--KAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKE 185

Query: 283 VCYRMSQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFC 462
           +   M      PN ++  ALI+ F ++G  E   G++  + K G   ++++ + ++ GFC
Sbjct: 186 LFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFC 245

Query: 463 LKNEVVKATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLV 642
            K ++ +  E F E  +  V P++V+++ L+  LCK +K +EA  +   M  C   PD+V
Sbjct: 246 SKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVV 305

Query: 643 TYTVLIDGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDM 822
            YTVL DGL K GR  +A+ +LD M  +G + + V Y+ +I GLC  G V+    +L  M
Sbjct: 306 AYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETM 365

Query: 823 LSKGISPNVNMYNNLMYGLRKMGKSKE 903
             KG  P+V  Y+ L+ GL  +GK  E
Sbjct: 366 AKKGKKPDVVTYSTLVKGLCGVGKIDE 392



 Score = 99.8 bits (247), Expect = 8e-19
 Identities = 65/261 (24%), Positives = 129/261 (49%), Gaps = 2/261 (0%)
 Frame = +1

Query: 127  LRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFKVCYRM--S 300
            + GLC++   ++ DA+ +   +   G  P  ++ + LV+ L    + +    +   +   
Sbjct: 346  INGLCKEG--RVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSK 403

Query: 301  QVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFCLKNEVV 480
            +  + P+  +   +I+   +  +   A  V   +++RG+  NI   N+++ G+    ++ 
Sbjct: 404  EFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLT 463

Query: 481  KATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLVTYTVLI 660
            KA E +++   + + P+  ++  LI GLCK + L  A  L  +  A    P +  Y  L+
Sbjct: 464  KALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLM 523

Query: 661  DGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDMLSKGIS 840
              LC+E  +++A  L  EMR    D DVV ++ +I G   +GDVE  +ELL +ML+  + 
Sbjct: 524  ASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLV 583

Query: 841  PNVNMYNNLMYGLRKMGKSKE 903
            P+   ++ L+    K+G+  E
Sbjct: 584  PDNITFSILINRFLKLGQLDE 604



 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 67/264 (25%), Positives = 121/264 (45%)
 Frame = +1

Query: 103  DLHKVDTQLRGLCEKSNSQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVFK 282
            D+   +  ++ LC++   +L  A  ++Y +V+ G   + ++ N L+       +     +
Sbjct: 410  DVFAFNLVIQELCKQR--RLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALE 467

Query: 283  VCYRMSQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGFC 462
            +       G+ PN  +   LI    +      A G+       G    +   N ++   C
Sbjct: 468  LWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLC 527

Query: 463  LKNEVVKATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDLV 642
             ++ V +A   F+E       PD+VSFN +I G  KA  +E A +L +EM   N  PD +
Sbjct: 528  RESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNI 587

Query: 643  TYTVLIDGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLNDM 822
            T+++LI+   K G++DEA  L + M   G   D V++D+L++G    G  EK   +L  M
Sbjct: 588  TFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQM 647

Query: 823  LSKGISPNVNMYNNLMYGLRKMGK 894
              K +  +  + + ++  L  M K
Sbjct: 648  ADKDVVLDSKLTSTILACLCNMSK 671



 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 1/268 (0%)
 Frame = +1

Query: 103  DLHKVDTQLRGLCEKSN-SQLIDAVSLFYHVVDSGLTPSGLSCNFLVQTLARNNEYNLVF 279
            D+    T ++GLC      + +D ++L     +  + P   + N ++Q L +        
Sbjct: 373  DVVTYSTLVKGLCGVGKIDEAVDLLNLLMSK-EFHIKPDVFAFNLVIQELCKQRRLRHAK 431

Query: 280  KVCYRMSQVGVLPNFLSLGALIEFFMQSGKPEFATGVVGLILKRGYNVNIYLANVILKGF 459
            +V Y M + G   N ++   LI+ ++ +GK   A  +    +  G + N     V++ G 
Sbjct: 432  RVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGL 491

Query: 460  CLKNEVVKATEFFREFSKNVVFPDIVSFNTLIKGLCKAKKLEEAFDLKVEMEACNCAPDL 639
            C    +  A   F +   +   P +  +NTL+  LC+   +E+A +L  EM   N  PD+
Sbjct: 492  CKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDV 551

Query: 640  VTYTVLIDGLCKEGRMDEAMGLLDEMRMKGLDVDVVVYDNLIRGLCFSGDVEKGQELLND 819
            V++ ++IDG  K G ++ A  LL EM    L  D + +  LI      G +++   L   
Sbjct: 552  VSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYER 611

Query: 820  MLSKGISPNVNMYNNLMYGLRKMGKSKE 903
            M+S G  P+  ++++L+ G    GK+++
Sbjct: 612  MVSCGHVPDAVLFDSLLKGYSLKGKTEK 639