BLASTX nr result

ID: Panax21_contig00027854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027854
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyas...   267   1e-69
ref|XP_003523772.1| PREDICTED: rhamnogalacturonate lyase B-like ...   264   1e-68
ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyas...   261   9e-68
emb|CBI19298.3| unnamed protein product [Vitis vinifera]              261   9e-68
ref|XP_003603709.1| Rhamnogalacturonate lyase [Medicago truncatu...   255   6e-66

>ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  267 bits (683), Expect = 1e-69
 Identities = 121/160 (75%), Positives = 143/160 (89%)
 Frame = +1

Query: 1   RFRQYGLWEKYSELYPNEELVYTIGESDYRKDWFFAQVNRRKDDNTYQGTTWQIKFKLDI 180
           +FRQYGLWE+Y+ELYP+++L+YTIG SDY KDWFFAQV R+KDDNTYQGTTWQIKFKLD 
Sbjct: 477 KFRQYGLWERYAELYPDKDLIYTIGVSDYTKDWFFAQVTRKKDDNTYQGTTWQIKFKLDS 536

Query: 181 VNQTGSYKLRVALAGATLAELQIRINDPKINHPLFTTGLIGRDNAIARHGIHGLYWMYNV 360
           VN++ SYKLRVALA ATL+ELQ+R+N+PK   PLF++GLIGRDN+IARHGIHGLYW+YNV
Sbjct: 537 VNKSSSYKLRVALASATLSELQVRVNNPKAPRPLFSSGLIGRDNSIARHGIHGLYWLYNV 596

Query: 361 NVPGNQLFEGDNTIYLTQSRSVGPFQGIM*DYIRLESPSS 480
            +PG QL EGDNTI+LTQ+R  GPFQ IM DYIRLE+P S
Sbjct: 597 GIPGTQLVEGDNTIFLTQTRGNGPFQAIMYDYIRLEAPPS 636


>ref|XP_003523772.1| PREDICTED: rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  264 bits (674), Expect = 1e-68
 Identities = 119/160 (74%), Positives = 142/160 (88%)
 Frame = +1

Query: 1   RFRQYGLWEKYSELYPNEELVYTIGESDYRKDWFFAQVNRRKDDNTYQGTTWQIKFKLDI 180
           +FRQYGLWE+Y+ELYP+++L+YT+G SDY KDWFFAQV R+KDDNTYQGTTWQIKFKLD 
Sbjct: 477 KFRQYGLWERYAELYPDKDLIYTVGVSDYTKDWFFAQVTRKKDDNTYQGTTWQIKFKLDN 536

Query: 181 VNQTGSYKLRVALAGATLAELQIRINDPKINHPLFTTGLIGRDNAIARHGIHGLYWMYNV 360
           VN++ SYKLRVALA A L+ELQ+R+N+PK   PLF++GLIGRDN+IARHGIHGLYW+YNV
Sbjct: 537 VNKSSSYKLRVALASAALSELQVRVNNPKAPRPLFSSGLIGRDNSIARHGIHGLYWLYNV 596

Query: 361 NVPGNQLFEGDNTIYLTQSRSVGPFQGIM*DYIRLESPSS 480
           ++PG QL EGDNTI+LTQ+R  GPFQ IM DYIRLE P S
Sbjct: 597 DMPGTQLVEGDNTIFLTQTRGNGPFQAIMYDYIRLEGPPS 636


>ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyase B-like isoform 1
           [Vitis vinifera]
          Length = 643

 Score =  261 bits (667), Expect = 9e-68
 Identities = 121/160 (75%), Positives = 139/160 (86%)
 Frame = +1

Query: 1   RFRQYGLWEKYSELYPNEELVYTIGESDYRKDWFFAQVNRRKDDNTYQGTTWQIKFKLDI 180
           RFRQYGLWE+Y+ELYP+ +LVYTIG SDY KDWFFAQV R+KD+NTYQGTTWQIKF LD 
Sbjct: 474 RFRQYGLWERYAELYPDGDLVYTIGVSDYTKDWFFAQVTRKKDNNTYQGTTWQIKFTLDT 533

Query: 181 VNQTGSYKLRVALAGATLAELQIRINDPKINHPLFTTGLIGRDNAIARHGIHGLYWMYNV 360
           V+Q G+YKLRVA+A ATL+ELQ+R+NDPK N P FT+GLIGRDN IARHGIHGLYW+Y+V
Sbjct: 534 VDQIGTYKLRVAIASATLSELQVRVNDPKANPPHFTSGLIGRDNTIARHGIHGLYWLYSV 593

Query: 361 NVPGNQLFEGDNTIYLTQSRSVGPFQGIM*DYIRLESPSS 480
           NV GN L EG+NTI+LTQ RS  PFQGI+ DYIRLE P S
Sbjct: 594 NVLGNLLVEGENTIFLTQPRSTSPFQGILYDYIRLEGPPS 633


>emb|CBI19298.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score =  261 bits (667), Expect = 9e-68
 Identities = 121/160 (75%), Positives = 139/160 (86%)
 Frame = +1

Query: 1   RFRQYGLWEKYSELYPNEELVYTIGESDYRKDWFFAQVNRRKDDNTYQGTTWQIKFKLDI 180
           RFRQYGLWE+Y+ELYP+ +LVYTIG SDY KDWFFAQV R+KD+NTYQGTTWQIKF LD 
Sbjct: 487 RFRQYGLWERYAELYPDGDLVYTIGVSDYTKDWFFAQVTRKKDNNTYQGTTWQIKFTLDT 546

Query: 181 VNQTGSYKLRVALAGATLAELQIRINDPKINHPLFTTGLIGRDNAIARHGIHGLYWMYNV 360
           V+Q G+YKLRVA+A ATL+ELQ+R+NDPK N P FT+GLIGRDN IARHGIHGLYW+Y+V
Sbjct: 547 VDQIGTYKLRVAIASATLSELQVRVNDPKANPPHFTSGLIGRDNTIARHGIHGLYWLYSV 606

Query: 361 NVPGNQLFEGDNTIYLTQSRSVGPFQGIM*DYIRLESPSS 480
           NV GN L EG+NTI+LTQ RS  PFQGI+ DYIRLE P S
Sbjct: 607 NVLGNLLVEGENTIFLTQPRSTSPFQGILYDYIRLEGPPS 646


>ref|XP_003603709.1| Rhamnogalacturonate lyase [Medicago truncatula]
           gi|355492757|gb|AES73960.1| Rhamnogalacturonate lyase
           [Medicago truncatula]
          Length = 651

 Score =  255 bits (651), Expect = 6e-66
 Identities = 116/161 (72%), Positives = 141/161 (87%), Gaps = 1/161 (0%)
 Frame = +1

Query: 1   RFRQYGLWEKYSELYPNEELVYTIGESDYRKDWFFAQVNRRKDDNTYQGTTWQIKFKLDI 180
           +FRQYG+WE+Y+ELYP+ +L+YTIG SD+ KDWFFAQV R+K+DNTYQGTTWQIKF LD 
Sbjct: 480 KFRQYGIWERYAELYPDNDLIYTIGVSDFTKDWFFAQVTRKKEDNTYQGTTWQIKFNLDN 539

Query: 181 VNQTGSYKLRVALAGATLAELQIRINDPKINHPLFTTGLIGRDNAIARHGIHGLYWMYNV 360
           VN+ GSYKLRVALA AT +ELQ+R+NDPK N PLF++GLIG+DN+IARHGIHGLYW+YNV
Sbjct: 540 VNRKGSYKLRVALASATYSELQVRVNDPKTNRPLFSSGLIGKDNSIARHGIHGLYWLYNV 599

Query: 361 NVPGNQLFEGD-NTIYLTQSRSVGPFQGIM*DYIRLESPSS 480
           N+PG+ L EGD NTI+LTQ+R   PFQ IM DYIRLE P++
Sbjct: 600 NIPGSLLVEGDNNTIFLTQARGNIPFQAIMYDYIRLEGPAT 640