BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027747
         (1675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16283.3| unnamed protein product [Vitis vinifera]              676   0.0  
ref|XP_002284994.1| PREDICTED: general transcription factor IIH ...   676   0.0  
ref|XP_004143721.1| PREDICTED: general transcription factor IIH ...   631   e-178
ref|XP_002331276.1| predicted protein [Populus trichocarpa] gi|2...   631   e-178
ref|XP_003624959.1| General transcription factor IIH subunit [Me...   628   e-177

>emb|CBI16283.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  676 bits (1745), Expect = 0.0
 Identities = 326/385 (84%), Positives = 344/385 (89%), Gaps = 3/385 (0%)
 Frame = +2

Query: 137  RAYADERSWESLQEDESGLLRPIDNKTIQHAQYXXXXXXXXXXXX---IQKGLIRYLYIV 307
            RAYADERSWESLQEDESGLLRPIDNKTI HAQY               IQKGLIRYLYIV
Sbjct: 102  RAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIRYLYIV 161

Query: 308  IDLSRAAGEMDFRPSRMFVVAKQVEGFIREFFDQNPLSQIGLITIKDGVAQCLTDLGGSP 487
            +DLSRAA EMDF+PSRM VVAK +E FIREFFDQNPLSQIGL+TIKDG+AQCLTDLGGSP
Sbjct: 162  VDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTDLGGSP 221

Query: 488  ESHIKALMGKLGCSGDSSLQNALDLVHDYLNQIPSYGHREALILYSALSTCDPGDIMESI 667
            +SH+KALMGKL CSGDSSLQNALDLVH YLNQIPSYGHRE LILYSALSTCDPGDIME+I
Sbjct: 222  DSHVKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIMETI 281

Query: 668  QRCKKSKIRCSVIGLSAELFICKHICQETGGSYSVALDESHLKELVLEHAPPPPAIAEFA 847
            Q CKKSKIRCSVIGLSAE+FIC+H+CQETGGSYSVALDESH KEL+LEHAPPPPAIAEFA
Sbjct: 282  QECKKSKIRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIAEFA 341

Query: 848  LANLIKMGFPQRAAEGVISICSCHKEAKVAGGYTCPRCKARVCELPTECCICGLTLVSSP 1027
            +ANLIKMGFPQRAAEGVISICSCHKEAKV GGYTCPRCKARVCELPTEC ICGLTLVSSP
Sbjct: 342  IANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLVSSP 401

Query: 1028 HLARSYHHLFPITPFIDVSPSLPNKLHHKVPKSCFGCQQSLLSPGNLPGLCVACPKCKQH 1207
            HLARSYHHLFPI PF +VS SL N  H +  ++CFGCQ+SLL PGN P LCVACPKCKQH
Sbjct: 402  HLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVACPKCKQH 461

Query: 1208 FCLDCDIYIHESLHNCPGCESFTQS 1282
            FCLDCDIYIHESLHNCPGCESF  S
Sbjct: 462  FCLDCDIYIHESLHNCPGCESFRHS 486


>ref|XP_002284994.1| PREDICTED: general transcription factor IIH subunit 2 [Vitis
            vinifera]
          Length = 433

 Score =  676 bits (1745), Expect = 0.0
 Identities = 326/385 (84%), Positives = 344/385 (89%), Gaps = 3/385 (0%)
 Frame = +2

Query: 137  RAYADERSWESLQEDESGLLRPIDNKTIQHAQYXXXXXXXXXXXX---IQKGLIRYLYIV 307
            RAYADERSWESLQEDESGLLRPIDNKTI HAQY               IQKGLIRYLYIV
Sbjct: 41   RAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIRYLYIV 100

Query: 308  IDLSRAAGEMDFRPSRMFVVAKQVEGFIREFFDQNPLSQIGLITIKDGVAQCLTDLGGSP 487
            +DLSRAA EMDF+PSRM VVAK +E FIREFFDQNPLSQIGL+TIKDG+AQCLTDLGGSP
Sbjct: 101  VDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTDLGGSP 160

Query: 488  ESHIKALMGKLGCSGDSSLQNALDLVHDYLNQIPSYGHREALILYSALSTCDPGDIMESI 667
            +SH+KALMGKL CSGDSSLQNALDLVH YLNQIPSYGHRE LILYSALSTCDPGDIME+I
Sbjct: 161  DSHVKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIMETI 220

Query: 668  QRCKKSKIRCSVIGLSAELFICKHICQETGGSYSVALDESHLKELVLEHAPPPPAIAEFA 847
            Q CKKSKIRCSVIGLSAE+FIC+H+CQETGGSYSVALDESH KEL+LEHAPPPPAIAEFA
Sbjct: 221  QECKKSKIRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIAEFA 280

Query: 848  LANLIKMGFPQRAAEGVISICSCHKEAKVAGGYTCPRCKARVCELPTECCICGLTLVSSP 1027
            +ANLIKMGFPQRAAEGVISICSCHKEAKV GGYTCPRCKARVCELPTEC ICGLTLVSSP
Sbjct: 281  IANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLVSSP 340

Query: 1028 HLARSYHHLFPITPFIDVSPSLPNKLHHKVPKSCFGCQQSLLSPGNLPGLCVACPKCKQH 1207
            HLARSYHHLFPI PF +VS SL N  H +  ++CFGCQ+SLL PGN P LCVACPKCKQH
Sbjct: 341  HLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVACPKCKQH 400

Query: 1208 FCLDCDIYIHESLHNCPGCESFTQS 1282
            FCLDCDIYIHESLHNCPGCESF  S
Sbjct: 401  FCLDCDIYIHESLHNCPGCESFRHS 425


>ref|XP_004143721.1| PREDICTED: general transcription factor IIH subunit 2-like [Cucumis
            sativus]
          Length = 423

 Score =  631 bits (1628), Expect = e-178
 Identities = 299/384 (77%), Positives = 333/384 (86%), Gaps = 5/384 (1%)
 Frame = +2

Query: 137  RAYADERSWESLQEDESGLLRPIDNKTIQHAQYXXXXXXXXXXXX---IQKGLIRYLYIV 307
            R YAD+RSWE+LQEDESGLLRPIDNK I HAQY               IQKGLIRYLYIV
Sbjct: 30   RTYADDRSWEALQEDESGLLRPIDNKAIYHAQYRRRLRTLSSLATTARIQKGLIRYLYIV 89

Query: 308  IDLSRAAGEMDFRPSRMFVVAKQVEGFIREFFDQNPLSQIGLITIKDGVAQCLTDLGGSP 487
            ID S+AA EMDFRPSRM VVAK V+ F+REFFDQNPLSQIGL+TIKDG A CLTDLGGSP
Sbjct: 90   IDFSKAATEMDFRPSRMAVVAKHVDAFVREFFDQNPLSQIGLVTIKDGFANCLTDLGGSP 149

Query: 488  ESHIKALMGKLGCSGDSSLQNALDLVHDYLNQIPSYGHREALILYSALSTCDPGDIMESI 667
            ESH+KALMGKL CSGD+SLQN L+LVH YLNQIPSYGHRE L+LYSAL++CDPGDIME++
Sbjct: 150  ESHVKALMGKLECSGDASLQNGLELVHSYLNQIPSYGHREVLVLYSALNSCDPGDIMETV 209

Query: 668  QRCKKSKIRCSVIGLSAELFICKHICQETGGSYSVALDESHLKELVLEHAPPPPAIAEFA 847
            Q+CK SKIRCSVIGL+AE+FIC+H+CQETGGSYSVALDESH KEL+LEHAPPPPAIA+ A
Sbjct: 210  QKCKTSKIRCSVIGLTAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIADSA 269

Query: 848  LANLIKMGFPQRAAEGVISICSCHKEAKVAGGYTCPRCKARVCELPTECCICGLTLVSSP 1027
            + NLIKMGFPQRAAE  I+ICSCHKEAKV GGYTCPRCKARVCELPTEC ICGLTL+SSP
Sbjct: 270  MPNLIKMGFPQRAAESSIAICSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLISSP 329

Query: 1028 HLARSYHHLFPITPFIDVSPSLPNKLHHKVPKSCFGCQQSLLSP--GNLPGLCVACPKCK 1201
            HLARSYHHLFPI PF +VS  + +   H++PK CFGCQ+SL++P  GN P + V+CPKCK
Sbjct: 330  HLARSYHHLFPIIPFDEVSDKVFHDPRHQLPKVCFGCQESLMNPSTGNSPSIRVSCPKCK 389

Query: 1202 QHFCLDCDIYIHESLHNCPGCESF 1273
            QHFCLDCDIYIHESLHNCPGCESF
Sbjct: 390  QHFCLDCDIYIHESLHNCPGCESF 413


>ref|XP_002331276.1| predicted protein [Populus trichocarpa] gi|222873701|gb|EEF10832.1|
            predicted protein [Populus trichocarpa]
          Length = 412

 Score =  631 bits (1628), Expect = e-178
 Identities = 304/385 (78%), Positives = 334/385 (86%), Gaps = 3/385 (0%)
 Frame = +2

Query: 137  RAYADERSWESLQEDESGLLRPIDNKTIQHAQYXXXXXXXXXXXX---IQKGLIRYLYIV 307
            R Y+DERSWE+LQEDESGLLRP+DNK + HAQY               IQKGLIR+LYIV
Sbjct: 28   RNYSDERSWEALQEDESGLLRPLDNKAMYHAQYRRRLRSLSTASNSQRIQKGLIRFLYIV 87

Query: 308  IDLSRAAGEMDFRPSRMFVVAKQVEGFIREFFDQNPLSQIGLITIKDGVAQCLTDLGGSP 487
            +DLSRAA  MDFRPSRM VVA+ VE FIREFFDQNPLSQI L+TIKDGVA  LT+LGGSP
Sbjct: 88   LDLSRAASVMDFRPSRMAVVAQNVEAFIREFFDQNPLSQIALVTIKDGVAYSLTELGGSP 147

Query: 488  ESHIKALMGKLGCSGDSSLQNALDLVHDYLNQIPSYGHREALILYSALSTCDPGDIMESI 667
            ESHIKALM KL CSGDSSLQNAL+LVH+YL++IPSYG+RE LILYSAL+TCDPGDIME+I
Sbjct: 148  ESHIKALMAKLECSGDSSLQNALELVHEYLDKIPSYGNREVLILYSALTTCDPGDIMETI 207

Query: 668  QRCKKSKIRCSVIGLSAELFICKHICQETGGSYSVALDESHLKELVLEHAPPPPAIAEFA 847
            Q+CKKSK+RCSVIGLSAE+FICKH+CQETGG YSVALDESH KEL+LEHAPPPPAIAEFA
Sbjct: 208  QKCKKSKMRCSVIGLSAEMFICKHLCQETGGLYSVALDESHFKELILEHAPPPPAIAEFA 267

Query: 848  LANLIKMGFPQRAAEGVISICSCHKEAKVAGGYTCPRCKARVCELPTECCICGLTLVSSP 1027
            +ANLIKMGFPQRAAEG ISICSCHKE+KV  GY CPRCKARVCELPTEC ICGLTLVSSP
Sbjct: 268  IANLIKMGFPQRAAEGSISICSCHKESKVGEGYICPRCKARVCELPTECRICGLTLVSSP 327

Query: 1028 HLARSYHHLFPITPFIDVSPSLPNKLHHKVPKSCFGCQQSLLSPGNLPGLCVACPKCKQH 1207
            HLARSYHHLFPI PF +V PS  N+ H +  K+CFGCQQSL++PGN P L VACPKCKQ+
Sbjct: 328  HLARSYHHLFPIAPFDEVKPSRQNEPHRRSQKTCFGCQQSLVNPGNKPSLQVACPKCKQY 387

Query: 1208 FCLDCDIYIHESLHNCPGCESFTQS 1282
            FCLDCDIYIHESLHNCPGCES   S
Sbjct: 388  FCLDCDIYIHESLHNCPGCESLRAS 412


>ref|XP_003624959.1| General transcription factor IIH subunit [Medicago truncatula]
            gi|355499974|gb|AES81177.1| General transcription factor
            IIH subunit [Medicago truncatula]
          Length = 426

 Score =  628 bits (1619), Expect = e-177
 Identities = 299/389 (76%), Positives = 330/389 (84%), Gaps = 7/389 (1%)
 Frame = +2

Query: 137  RAYADERSWESLQEDESGLLRPIDNKTIQHAQYXXXXXXXXXXXX---IQKGLIRYLYIV 307
            RAY ++RSWESLQEDESGLLRPID   I HAQY               IQKGLIRYLYIV
Sbjct: 31   RAYTEDRSWESLQEDESGLLRPIDTTAIHHAQYRRRLRALASNAATARIQKGLIRYLYIV 90

Query: 308  IDLSRAAGEMDFRPSRMFVVAKQVEGFIREFFDQNPLSQIGLITIKDGVAQCLTDLGGSP 487
            +DLS+AA E DFRPSRM V+AKQVE FIREFFDQNPLS +GL+T KDGVA CLTDLGGSP
Sbjct: 91   VDLSKAASERDFRPSRMAVIAKQVELFIREFFDQNPLSHVGLVTTKDGVANCLTDLGGSP 150

Query: 488  ESHIKALMGKLGCSGDSSLQNALDLVHDYLNQIPSYGHREALILYSALSTCDPGDIMESI 667
            ESHIKALMGKL CSGD+SLQNAL+LVH  LNQIPSYGHRE LILYSALSTCDPGD+ME+I
Sbjct: 151  ESHIKALMGKLECSGDASLQNALELVHSNLNQIPSYGHREVLILYSALSTCDPGDLMETI 210

Query: 668  QRCKKSKIRCSVIGLSAELFICKHICQETGGSYSVALDESHLKELVLEHAPPPPAIAEFA 847
            Q+CKKSKIRCSVIGL+AE+FICKH+CQETGG+YSVALDESH KEL+LEH+PPPPAIAE+A
Sbjct: 211  QKCKKSKIRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHSPPPPAIAEYA 270

Query: 848  LANLIKMGFPQRAAEGVISICSCHKEAKVAGGYTCPRCKARVCELPTECCICGLTLVSSP 1027
             ANLIKMGFPQRAAEG ++IC+CH+EAK  GGYTCPRCK RVCELPTEC +CGLTL+SSP
Sbjct: 271  TANLIKMGFPQRAAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGLTLISSP 330

Query: 1028 HLARSYHHLFPITPFIDVSPSLPNKLHHKVPKSCFGCQQSLLS----PGNLPGLCVACPK 1195
            HLARSYHHLFPI PF ++SPS  N  +H  P +CFGCQQSLLS     GN   L V+CPK
Sbjct: 331  HLARSYHHLFPIVPFAEISPSSQNDPNHSFPNTCFGCQQSLLSQGFGAGNKAELSVSCPK 390

Query: 1196 CKQHFCLDCDIYIHESLHNCPGCESFTQS 1282
            CKQ FCLDCD+YIHESLHNCPGCESF  S
Sbjct: 391  CKQQFCLDCDMYIHESLHNCPGCESFRHS 419