BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027741
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514422.1| pentatricopeptide repeat-containing protein,...    75   5e-12
ref|XP_004146736.1| PREDICTED: pentatricopeptide repeat-containi...    65   3e-11
ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containi...    65   3e-11
emb|CBI34116.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11

>ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546418|gb|EEF47918.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 809

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 36/73 (49%), Positives = 50/73 (68%)
 Frame = -1

Query: 224 TLEQFERKPSLALSYFHQLKEDGFQHDVCTYMAIIRILCYWGMDIKLHYVLLDVIELEIE 45
           TL     +PSLA SYF+QLKE G+ HD  TY AI+RILC+WG   KL  +L+++I+ +  
Sbjct: 65  TLNNLRNEPSLAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKD-G 123

Query: 44  YLGFEVSDLFDAL 6
            L F + +LF+AL
Sbjct: 124 NLDFGIVNLFEAL 136


>ref|XP_004146736.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Cucumis sativus]
          Length = 920

 Score = 65.5 bits (158), Expect(2) = 3e-11
 Identities = 32/72 (44%), Positives = 49/72 (68%)
 Frame = -1

Query: 221 LEQFERKPSLALSYFHQLKEDGFQHDVCTYMAIIRILCYWGMDIKLHYVLLDVIELEIEY 42
           LE   R+P +A S+F +L+E GFQH++ TY A+IRILC WG+  KL  + L++I    + 
Sbjct: 66  LESLRREPKIAFSFFCELEERGFQHNISTYAALIRILCSWGLGRKLETLFLNLI--GSKK 123

Query: 41  LGFEVSDLFDAL 6
           + F+V DL ++L
Sbjct: 124 VEFDVLDLIESL 135



 Score = 27.3 bits (59), Expect(2) = 3e-11
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
 Frame = -2

Query: 403 LVSCRNFVKYNPF----IRFNSISTVAQLSSDLSDAGCDEQTHYTKNTTLDDEVLDFDSS 236
           L++  N  K N      +RF S + +AQL+S +     DEQ+  + NT+L+   +    S
Sbjct: 5   LLAVNNPTKLNKLKLKLVRFAS-TAIAQLNSCIFSHSDDEQSTSSFNTSLN---VQCKPS 60

Query: 235 KVTLHLNNLRESP 197
           KV   L +LR  P
Sbjct: 61  KVVQVLESLRREP 73


>ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Cucumis sativus]
          Length = 795

 Score = 65.5 bits (158), Expect(2) = 3e-11
 Identities = 32/72 (44%), Positives = 49/72 (68%)
 Frame = -1

Query: 221 LEQFERKPSLALSYFHQLKEDGFQHDVCTYMAIIRILCYWGMDIKLHYVLLDVIELEIEY 42
           LE   R+P +A S+F +L+E GFQH++ TY A+IRILC WG+  KL  + L++I    + 
Sbjct: 66  LESLRREPKIAFSFFCELEERGFQHNISTYAALIRILCSWGLGRKLETLFLNLI--GSKK 123

Query: 41  LGFEVSDLFDAL 6
           + F+V DL ++L
Sbjct: 124 VEFDVLDLIESL 135



 Score = 27.3 bits (59), Expect(2) = 3e-11
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
 Frame = -2

Query: 403 LVSCRNFVKYNPF----IRFNSISTVAQLSSDLSDAGCDEQTHYTKNTTLDDEVLDFDSS 236
           L++  N  K N      +RF S + +AQL+S +     DEQ+  + NT+L+   +    S
Sbjct: 5   LLAVNNPTKLNKLKLKLVRFAS-TAIAQLNSCIFSHSDDEQSTSSFNTSLN---VQCKPS 60

Query: 235 KVTLHLNNLRESP 197
           KV   L +LR  P
Sbjct: 61  KVVQVLESLRREP 73


>emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/68 (47%), Positives = 49/68 (72%)
 Frame = -1

Query: 209 ERKPSLALSYFHQLKEDGFQHDVCTYMAIIRILCYWGMDIKLHYVLLDVIELEIEYLGFE 30
           + +P+LA S+F QLKE GFQH+V TY A+IR+LC W ++ KL  +L +++  +   LGF+
Sbjct: 74  KNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFD 133

Query: 29  VSDLFDAL 6
           ++ LFD L
Sbjct: 134 ITALFDVL 141


>ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/68 (47%), Positives = 49/68 (72%)
 Frame = -1

Query: 209 ERKPSLALSYFHQLKEDGFQHDVCTYMAIIRILCYWGMDIKLHYVLLDVIELEIEYLGFE 30
           + +P+LA S+F QLKE GFQH+V TY A+IR+LC W ++ KL  +L +++  +   LGF+
Sbjct: 74  KNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFD 133

Query: 29  VSDLFDAL 6
           ++ LFD L
Sbjct: 134 ITALFDVL 141