BLASTX nr result

ID: Panax21_contig00027721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027721
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1...    83   3e-14
ref|XP_003636005.1| Helicase-like protein [Medicago truncatula] ...    80   1e-13
ref|XP_003607945.1| Helicase-like protein [Medicago truncatula] ...    79   3e-13
ref|XP_003606875.1| Helicase-like protein [Medicago truncatula] ...    79   3e-13
gb|EEC82986.1| hypothetical protein OsI_28021 [Oryza sativa Indi...    76   3e-12

>gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1-like protein
           [Beta vulgaris subsp. vulgaris]
          Length = 2037

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 35/67 (52%), Positives = 43/67 (64%)
 Frame = +3

Query: 270 HLNFLNSNYWDIGDSNWECSSCNVLMWYHERIYKNRKSKNPEFSMCCAGGKVQLPLLKEP 449
           H+   ++ YWDIGD  + C  C  L WY ERI K+RKS  P FS CC  GKVQLP  K+P
Sbjct: 739 HITEEHTEYWDIGDPTYTCEHCGALFWYEERIGKHRKSPKPTFSNCCMNGKVQLPHFKDP 798

Query: 450 PHILKAL 470
           P +L+ L
Sbjct: 799 PALLQRL 805


>ref|XP_003636005.1| Helicase-like protein [Medicago truncatula]
           gi|355501940|gb|AES83143.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1844

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 34/59 (57%), Positives = 42/59 (71%)
 Frame = +3

Query: 294 YWDIGDSNWECSSCNVLMWYHERIYKNRKSKNPEFSMCCAGGKVQLPLLKEPPHILKAL 470
           Y DIGD  WEC  C  LMWY ER  K+R S  P+F +CC GGKV+LPLL++PP +L+ L
Sbjct: 438 YSDIGDPIWECQMCGALMWYQERKDKSRHSTVPKFQLCCGGGKVKLPLLEQPPQLLQDL 496


>ref|XP_003607945.1| Helicase-like protein [Medicago truncatula]
           gi|355509000|gb|AES90142.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1651

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 33/63 (52%), Positives = 41/63 (65%)
 Frame = +3

Query: 282 LNSNYWDIGDSNWECSSCNVLMWYHERIYKNRKSKNPEFSMCCAGGKVQLPLLKEPPHIL 461
           L + Y DIGD ++EC  C   MWY ER  K+R+S NPEF MCC  GK+Q+P L  PP +L
Sbjct: 260 LEAGYSDIGDPSFECRKCGACMWYQERRRKSRESSNPEFGMCCGNGKIQIPFLPTPPPLL 319

Query: 462 KAL 470
             L
Sbjct: 320 NDL 322


>ref|XP_003606875.1| Helicase-like protein [Medicago truncatula]
           gi|355507930|gb|AES89072.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1674

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 33/63 (52%), Positives = 41/63 (65%)
 Frame = +3

Query: 282 LNSNYWDIGDSNWECSSCNVLMWYHERIYKNRKSKNPEFSMCCAGGKVQLPLLKEPPHIL 461
           L + Y DIGD ++EC  C   MWY ER  K+R+S NPEF MCC  GK+Q+P L  PP +L
Sbjct: 260 LEAGYSDIGDPSFECRKCGACMWYQERRRKSRESSNPEFGMCCGNGKIQIPFLPTPPPLL 319

Query: 462 KAL 470
             L
Sbjct: 320 NDL 322


>gb|EEC82986.1| hypothetical protein OsI_28021 [Oryza sativa Indica Group]
          Length = 937

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 30/63 (47%), Positives = 40/63 (63%)
 Frame = +3

Query: 282 LNSNYWDIGDSNWECSSCNVLMWYHERIYKNRKSKNPEFSMCCAGGKVQLPLLKEPPHIL 461
           ++S  W+ G   + C  CN L+WY ER+  N+ + NP F MCC  GK++LP LKEPP  L
Sbjct: 86  VHSQIWNFGKPTYICQHCNALLWYEERLNSNKSTTNPSFGMCCKQGKIKLPPLKEPPQYL 145

Query: 462 KAL 470
           K L
Sbjct: 146 KRL 148


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