BLASTX nr result

ID: Panax21_contig00027717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027717
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]      122   4e-26
emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]   122   4e-26
ref|XP_002515093.1| conserved hypothetical protein [Ricinus comm...   111   7e-23
dbj|BAK19069.1| late elongated hypocotyl homolog [Ipomoea nil]        108   3e-22
gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]             105   5e-21

>ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]
          Length = 771

 Score =  122 bits (305), Expect = 4e-26
 Identities = 68/141 (48%), Positives = 90/141 (63%), Gaps = 1/141 (0%)
 Frame = +2

Query: 26  CTFREFVPILKEVVNQDTTNESYATVEPSGSENTEKLDTKQTFKENPSCNPSKLA-SPTA 202
           CTFREFVP++KE  NQD TNESY TVEP G++  +K D +Q  +++     S L  S  +
Sbjct: 200 CTFREFVPLMKEGSNQDETNESYITVEPKGNQKLDKPDFRQKAQDSGMSKASNLENSHPS 259

Query: 203 HEKLVNGLTVDELSMLENCGALSSNDMQAALNCPRYVPAHVVDGTLVTNAQNLSADISYK 382
           HEKLV     DE S  EN G+   N+MQAA N PR+VP HV+DG+L T  Q  S++++Y 
Sbjct: 260 HEKLVQAEKTDEPSQSENFGSQPKNEMQAAQNFPRHVPVHVLDGSLGTCTQAPSSEMTYG 319

Query: 383 GSFFLQMGQVDGLPGLFRNVA 445
            S   Q+G + G P LF+N A
Sbjct: 320 ESLVHQIG-IHGHPNLFQNPA 339


>emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]
          Length = 857

 Score =  122 bits (305), Expect = 4e-26
 Identities = 68/141 (48%), Positives = 90/141 (63%), Gaps = 1/141 (0%)
 Frame = +2

Query: 26  CTFREFVPILKEVVNQDTTNESYATVEPSGSENTEKLDTKQTFKENPSCNPSKLA-SPTA 202
           CTFREFVP++KE  NQD TNESY TVEP G++  +K D +Q  +++     S L  S  +
Sbjct: 286 CTFREFVPLMKEGSNQDETNESYITVEPKGNQKLDKPDFRQKAQDSGMSKASNLENSHPS 345

Query: 203 HEKLVNGLTVDELSMLENCGALSSNDMQAALNCPRYVPAHVVDGTLVTNAQNLSADISYK 382
           HEKLV     DE S  EN G+   N+MQAA N PR+VP HV+DG+L T  Q  S++++Y 
Sbjct: 346 HEKLVQAEKTDEPSQSENFGSQPKNEMQAAQNFPRHVPVHVLDGSLGTCTQAPSSEMTYG 405

Query: 383 GSFFLQMGQVDGLPGLFRNVA 445
            S   Q+G + G P LF+N A
Sbjct: 406 ESLVHQIG-IHGHPNLFQNPA 425


>ref|XP_002515093.1| conserved hypothetical protein [Ricinus communis]
           gi|223545573|gb|EEF47077.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 768

 Score =  111 bits (277), Expect = 7e-23
 Identities = 59/140 (42%), Positives = 84/140 (60%)
 Frame = +2

Query: 26  CTFREFVPILKEVVNQDTTNESYATVEPSGSENTEKLDTKQTFKENPSCNPSKLASPTAH 205
           C+FREFVP LK+VVNQD TNESY T+E  G++  +K D KQT ++N S   SK  S   H
Sbjct: 199 CSFREFVPSLKKVVNQDATNESYVTIELEGNQKLDKPDAKQTVQDNGSSKASKSESCLFH 258

Query: 206 EKLVNGLTVDELSMLENCGALSSNDMQAALNCPRYVPAHVVDGTLVTNAQNLSADISYKG 385
           EK       DE +      AL +++M+     PR+VP HV++G+L T  Q  ++D+S++ 
Sbjct: 259 EKFDQAKKSDEFN-----SALPTDEMETMQGYPRHVPVHVLEGSLGTCMQTPTSDVSFQE 313

Query: 386 SFFLQMGQVDGLPGLFRNVA 445
             F   G+V G P L+ + A
Sbjct: 314 PIFCPTGEVHGHPNLYSHPA 333


>dbj|BAK19069.1| late elongated hypocotyl homolog [Ipomoea nil]
          Length = 776

 Score =  108 bits (271), Expect = 3e-22
 Identities = 60/138 (43%), Positives = 87/138 (63%), Gaps = 1/138 (0%)
 Frame = +2

Query: 8   MAPSGICTFREFVPILKEVVNQDTTNESYATVEPSGSENTEKLDTKQTFKENPSCNPSKL 187
           +AP   CTFREFVPI+K   N+D  ++SY TVE  G++  +KLDTKQ+F++  SCN   +
Sbjct: 185 VAPQNSCTFREFVPIVKGT-NRDDASKSYVTVESKGNQEPDKLDTKQSFQDASSCNSLDM 243

Query: 188 A-SPTAHEKLVNGLTVDELSMLENCGALSSNDMQAALNCPRYVPAHVVDGTLVTNAQNLS 364
             S  + EKL +G  +DE +  +     + NDMQA  +CPR+VP H++DG+L  N  N +
Sbjct: 244 ENSFPSKEKLTHGEKLDEPNQPDE--VFTENDMQAVQSCPRHVPVHILDGSLGMNTNN-T 300

Query: 365 ADISYKGSFFLQMGQVDG 418
            D++Y  S   Q+G V G
Sbjct: 301 QDMTYHESIVHQIGGVQG 318


>gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]
          Length = 768

 Score =  105 bits (261), Expect = 5e-21
 Identities = 62/140 (44%), Positives = 82/140 (58%), Gaps = 1/140 (0%)
 Frame = +2

Query: 29  TFREFVPILKEVVNQDTTNESYATVEPSGSENTEKLDTKQTFKENPSCNPSKLASPTA-H 205
           T REFVP +K  + QD TNESY T+E  G++  EK D KQT ++  + N SKL +    H
Sbjct: 199 TLREFVPSMKRSITQDETNESYVTIELKGNQKLEKADAKQTIQDTGTSNGSKLGNHNVLH 258

Query: 206 EKLVNGLTVDELSMLENCGALSSNDMQAALNCPRYVPAHVVDGTLVTNAQNLSADISYKG 385
           EK + G    +L    NC AL  ++MQA  N PR+VP  VVDG+L T  Q  S+D+S++ 
Sbjct: 259 EKPIQGDKTQDL----NC-ALPMDEMQATQNYPRHVPVQVVDGSLGTCTQTPSSDMSFQD 313

Query: 386 SFFLQMGQVDGLPGLFRNVA 445
           S F  MG+V      F N A
Sbjct: 314 SIFHPMGEVHRHHNPFTNPA 333


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