BLASTX nr result

ID: Panax21_contig00027698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027698
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276571.1| PREDICTED: uncharacterized protein C12B10.15...   192   3e-47
ref|XP_002530433.1| phosphatidylinositol n-acetylglucosaminyltra...   179   2e-43
ref|XP_002332136.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-41
gb|ABK92865.1| unknown [Populus trichocarpa]                          172   3e-41
ref|XP_004172201.1| PREDICTED: ribonuclease H2 subunit C-like [C...   170   1e-40

>ref|XP_002276571.1| PREDICTED: uncharacterized protein C12B10.15c [Vitis vinifera]
           gi|297737975|emb|CBI27176.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score =  192 bits (487), Expect = 3e-47
 Identities = 92/149 (61%), Positives = 105/149 (70%), Gaps = 11/149 (7%)
 Frame = +2

Query: 26  GSIYLTRGDSAVDLTGQVHQLPCCIKYNGPCSVSQYFKPKST-----------AYFRGRK 172
           G I L  G++ VDLTG +HQLPCCIKYNGPCSVS YFKPK T           A+FRGRK
Sbjct: 15  GCIDLCLGEAVVDLTGHIHQLPCCIKYNGPCSVSHYFKPKHTGIEVEGLKVEEAFFRGRK 74

Query: 173 LQGTTISLPQGYSGFVIGKKNPXXXXXXXXXXXXXXXWEMNAKFQNVTLWNHDNLPSQDD 352
           LQGTTI LP+GYSGFV+GKK+                WE NAKFQ +T WNHDNLPSQDD
Sbjct: 75  LQGTTIHLPEGYSGFVLGKKSSNTTKSTGTSEGNMNRWETNAKFQAITFWNHDNLPSQDD 134

Query: 353 AFLRSFHWFAVSEALHKPVTAEDLESASI 439
           +++RSFHW AVS+ALHKP  AEDL  AS+
Sbjct: 135 SYVRSFHWLAVSKALHKPAMAEDLRVASL 163


>ref|XP_002530433.1| phosphatidylinositol n-acetylglucosaminyltransferase subunit p,
           putative [Ricinus communis] gi|223530019|gb|EEF31943.1|
           phosphatidylinositol n-acetylglucosaminyltransferase
           subunit p, putative [Ricinus communis]
          Length = 163

 Score =  179 bits (455), Expect = 2e-43
 Identities = 92/158 (58%), Positives = 105/158 (66%), Gaps = 12/158 (7%)
 Frame = +2

Query: 2   GGPEMGTFGSIYLTRG-DSAVDLTGQVHQLPCCIKYNGPCSVSQYFKPKST--------- 151
           G  E GT G I LT+  D   +L+GQ+H+LPCCIKY+GPC+VS YFKP  T         
Sbjct: 5   GNLEAGTMGIINLTKNQDEVTNLSGQIHRLPCCIKYDGPCAVSHYFKPNPTGVESEGLII 64

Query: 152 --AYFRGRKLQGTTISLPQGYSGFVIGKKNPXXXXXXXXXXXXXXXWEMNAKFQNVTLWN 325
             +YFRGRKLQG T+ LP GYSGFVIGKK                 WEMNAKF+NVT WN
Sbjct: 65  EESYFRGRKLQGATVPLPPGYSGFVIGKKK----NKCFQENENSNCWEMNAKFENVTYWN 120

Query: 326 HDNLPSQDDAFLRSFHWFAVSEALHKPVTAEDLESASI 439
            D LPS DD F RSFHW +V++ALHKPVTAEDL SASI
Sbjct: 121 LDTLPSLDDTFSRSFHWLSVAQALHKPVTAEDLASASI 158


>ref|XP_002332136.1| predicted protein [Populus trichocarpa] gi|222875186|gb|EEF12317.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  172 bits (437), Expect = 2e-41
 Identities = 85/158 (53%), Positives = 107/158 (67%), Gaps = 12/158 (7%)
 Frame = +2

Query: 2   GGPEMGTFGSIYLTRGDSAV-DLTGQVHQLPCCIKYNGPCSVSQYFKPKST--------- 151
           G  + G  G+I   + ++ V +LTG+VH LPCCIKY+GP +VS YFKPK T         
Sbjct: 5   GNSKAGITGTINQKKSETEVPNLTGKVHLLPCCIKYDGPSAVSHYFKPKPTGVEVEEMKV 64

Query: 152 --AYFRGRKLQGTTISLPQGYSGFVIGKKNPXXXXXXXXXXXXXXXWEMNAKFQNVTLWN 325
             A+FRGRKLQG T+++P GYSGFVIGKK+P               WE+ AKF+N+T WN
Sbjct: 65  EEAHFRGRKLQGATLAIPNGYSGFVIGKKSPGKRKASDMSEQNSNTWEITAKFENITYWN 124

Query: 326 HDNLPSQDDAFLRSFHWFAVSEALHKPVTAEDLESASI 439
           HD+LPS+ DAF+RS HW +V+EALHKP  AEDL SASI
Sbjct: 125 HDSLPSKVDAFVRSLHWLSVAEALHKPAAAEDLASASI 162


>gb|ABK92865.1| unknown [Populus trichocarpa]
          Length = 168

 Score =  172 bits (435), Expect = 3e-41
 Identities = 85/158 (53%), Positives = 106/158 (67%), Gaps = 12/158 (7%)
 Frame = +2

Query: 2   GGPEMGTFGSIYLTRGDSAV-DLTGQVHQLPCCIKYNGPCSVSQYFKPKST--------- 151
           G  + G  G+I   + ++ V +LTG+VH LPCCIKY+GP +VS YFKPK T         
Sbjct: 5   GNSKAGITGTINQKKSETEVPNLTGKVHLLPCCIKYDGPSAVSHYFKPKPTGVEVEEMKV 64

Query: 152 --AYFRGRKLQGTTISLPQGYSGFVIGKKNPXXXXXXXXXXXXXXXWEMNAKFQNVTLWN 325
             A+FRGRKLQG T+ +P GYSGFVIGKK+P               WE+ AKF+N+T WN
Sbjct: 65  EEAHFRGRKLQGATLPIPNGYSGFVIGKKSPGKRKASDMSEQNSNTWEITAKFENITYWN 124

Query: 326 HDNLPSQDDAFLRSFHWFAVSEALHKPVTAEDLESASI 439
           HD+LPS+ DAF+RS HW +V+EALHKP  AEDL SASI
Sbjct: 125 HDSLPSKVDAFVRSLHWLSVAEALHKPAAAEDLASASI 162


>ref|XP_004172201.1| PREDICTED: ribonuclease H2 subunit C-like [Cucumis sativus]
          Length = 164

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/138 (59%), Positives = 98/138 (71%), Gaps = 11/138 (7%)
 Frame = +2

Query: 56  AVDLTGQVHQLPCCIKYNGPCSVSQYFKPKST-----------AYFRGRKLQGTTISLPQ 202
           A+D++G+VHQLPC IK++GPC VS YFKPKST           AYFRGRKLQG TISLP+
Sbjct: 25  ALDISGKVHQLPCTIKFDGPCPVSHYFKPKSTGIEVDGLNLEEAYFRGRKLQGATISLPE 84

Query: 203 GYSGFVIGKKNPXXXXXXXXXXXXXXXWEMNAKFQNVTLWNHDNLPSQDDAFLRSFHWFA 382
           GYSG+V+GKK+                W++ AKF N+T WNHD LPSQDD F R+FHW  
Sbjct: 85  GYSGYVLGKKSKASKHCDDSSP-----WQVKAKFDNITYWNHDTLPSQDDTFQRTFHWLT 139

Query: 383 VSEALHKPVTAEDLESAS 436
           V++ALHKPVTAEDL SAS
Sbjct: 140 VAQALHKPVTAEDLASAS 157


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