BLASTX nr result

ID: Panax21_contig00027692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027692
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   181   5e-44
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              181   5e-44
ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic su...   166   1e-39
ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic su...   166   1e-39
ref|XP_003517307.1| PREDICTED: DNA polymerase alpha catalytic su...   151   6e-35

>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
           vinifera]
          Length = 1522

 Score =  181 bits (459), Expect = 5e-44
 Identities = 102/173 (58%), Positives = 119/173 (68%), Gaps = 3/173 (1%)
 Frame = +3

Query: 3   ADDQPL---RRRSRGADAEARAGALERLKALRRDGRRSESVSGGFQIKVADPIYDTVDED 173
           AD++P+   RRRSRGA+A AR+ AL+RLKALRR GRRS+ V  GFQIKV DPIYDTVDED
Sbjct: 2   ADEEPIVAGRRRSRGAEATARSDALQRLKALRRGGRRSDGV--GFQIKVEDPIYDTVDED 59

Query: 174 EYETLVAKRRQEAQEFVVDDDGLGYRDEGQEEDWSKPCGXXXXXXXXXXXXXXXXXXXXX 353
           EY+ LVAKRR+E + F+VDD+G GY DEGQEEDWS                         
Sbjct: 60  EYDKLVAKRREEFRGFIVDDNGSGYGDEGQEEDWSLAGVPPSSDESDGEAERPKKKKTEK 119

Query: 354 XXXXXXXXXXLSAAAALMGKQRLSNMYTSSVFKKSRDEKAKNVLSDSIVDDVI 512
                     LSAAAA+MGKQRLS+M+TSSVFKKSRD+K K +  DSIVDDVI
Sbjct: 120 KDPPPKKPSPLSAAAAMMGKQRLSSMFTSSVFKKSRDDKVKGLSCDSIVDDVI 172


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  181 bits (459), Expect = 5e-44
 Identities = 102/173 (58%), Positives = 119/173 (68%), Gaps = 3/173 (1%)
 Frame = +3

Query: 3   ADDQPL---RRRSRGADAEARAGALERLKALRRDGRRSESVSGGFQIKVADPIYDTVDED 173
           AD++P+   RRRSRGA+A AR+ AL+RLKALRR GRRS+ V  GFQIKV DPIYDTVDED
Sbjct: 2   ADEEPIVAGRRRSRGAEATARSDALQRLKALRRGGRRSDGV--GFQIKVEDPIYDTVDED 59

Query: 174 EYETLVAKRRQEAQEFVVDDDGLGYRDEGQEEDWSKPCGXXXXXXXXXXXXXXXXXXXXX 353
           EY+ LVAKRR+E + F+VDD+G GY DEGQEEDWS                         
Sbjct: 60  EYDKLVAKRREEFRGFIVDDNGSGYGDEGQEEDWSLAGVPPSSDESDGEAERPKKKKTEK 119

Query: 354 XXXXXXXXXXLSAAAALMGKQRLSNMYTSSVFKKSRDEKAKNVLSDSIVDDVI 512
                     LSAAAA+MGKQRLS+M+TSSVFKKSRD+K K +  DSIVDDVI
Sbjct: 120 KDPPPKKPSPLSAAAAMMGKQRLSSMFTSSVFKKSRDDKVKGLSCDSIVDDVI 172


>ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
           [Cucumis sativus]
          Length = 498

 Score =  166 bits (421), Expect = 1e-39
 Identities = 95/175 (54%), Positives = 119/175 (68%), Gaps = 5/175 (2%)
 Frame = +3

Query: 3   ADDQPL---RRRSRGADAEARAGALERLKALRRDGRRSESVSGGFQIKVADPIYDTVDED 173
           AD+QP    RRRSRG++A AR  ALERLKA+R  GRRSE+  GGFQ+K+ +PIYDT+ ED
Sbjct: 2   ADEQPSASNRRRSRGSEAAARLTALERLKAIRSGGRRSEA--GGFQVKLENPIYDTIPED 59

Query: 174 EYETLVAKRRQEAQEFVVDDDGLGYRDEGQEEDWSKP-CGXXXXXXXXXXXXXXXXXXXX 350
           EY+ LVAKRR+E + F+VDDDGLGY DEG+EEDWSK                        
Sbjct: 60  EYDALVAKRREEVRGFIVDDDGLGYGDEGEEEDWSKAGVCFSDESDGELDKPKKRKVVKK 119

Query: 351 XXXXXXXXXXXLSAAAALMGKQRLSNMYTSSVFKKS-RDEKAKNVLSDSIVDDVI 512
                      L+AAAA+MGKQ+LS+M+TSS+F+K+ RD+KAK +  DSIVDDVI
Sbjct: 120 ETQPKKPSSSSLTAAAAMMGKQKLSSMFTSSIFRKTGRDDKAKGLGCDSIVDDVI 174


>ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Cucumis
           sativus]
          Length = 1547

 Score =  166 bits (421), Expect = 1e-39
 Identities = 95/175 (54%), Positives = 119/175 (68%), Gaps = 5/175 (2%)
 Frame = +3

Query: 3   ADDQPL---RRRSRGADAEARAGALERLKALRRDGRRSESVSGGFQIKVADPIYDTVDED 173
           AD+QP    RRRSRG++A AR  ALERLKA+R  GRRSE+  GGFQ+K+ +PIYDT+ ED
Sbjct: 2   ADEQPSASNRRRSRGSEAAARLTALERLKAIRSGGRRSEA--GGFQVKLENPIYDTIPED 59

Query: 174 EYETLVAKRRQEAQEFVVDDDGLGYRDEGQEEDWSKP-CGXXXXXXXXXXXXXXXXXXXX 350
           EY+ LVAKRR+E + F+VDDDGLGY DEG+EEDWSK                        
Sbjct: 60  EYDALVAKRREEVRGFIVDDDGLGYGDEGEEEDWSKAGVCFSDESDGELDKPKKRKVVKK 119

Query: 351 XXXXXXXXXXXLSAAAALMGKQRLSNMYTSSVFKKS-RDEKAKNVLSDSIVDDVI 512
                      L+AAAA+MGKQ+LS+M+TSS+F+K+ RD+KAK +  DSIVDDVI
Sbjct: 120 ETQPKKPSSSSLTAAAAMMGKQKLSSMFTSSIFRKTGRDDKAKGLGCDSIVDDVI 174


>ref|XP_003517307.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Glycine
           max]
          Length = 1512

 Score =  151 bits (381), Expect = 6e-35
 Identities = 90/173 (52%), Positives = 112/173 (64%), Gaps = 3/173 (1%)
 Frame = +3

Query: 3   ADDQPL--RRRSRGADAEARAGALERLKALRRDGRRSESVSGGFQIKVADPIYDTVDEDE 176
           ADD+P+  RRR RG +A  R+ ALERLKA    GRRS++   G QI++ +P+YDTV EDE
Sbjct: 2   ADDEPVSGRRRPRGPEATERSKALERLKARIHGGRRSDAT--GPQIRLENPVYDTVPEDE 59

Query: 177 YETLVAKRRQEAQEFVVDDDGLGYRDEGQEEDWSKP-CGXXXXXXXXXXXXXXXXXXXXX 353
           Y  LVAKRR++A+ F+VDD+GLGY DEG+EEDWS+                         
Sbjct: 60  YNALVAKRREQARSFIVDDEGLGYGDEGEEEDWSQAGFNLSSGESEDESERPKRKKVEKK 119

Query: 354 XXXXXXXXXXLSAAAALMGKQRLSNMYTSSVFKKSRDEKAKNVLSDSIVDDVI 512
                     LSAAAA+MG QRLS+M+TSSVFKKSRD+KA    S+SIVDDVI
Sbjct: 120 DPQPKRPSSSLSAAAAMMGGQRLSSMFTSSVFKKSRDDKA----SESIVDDVI 168


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