BLASTX nr result
ID: Panax21_contig00027642
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00027642
(2560 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 134 9e-63
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 135 3e-62
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 140 1e-60
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 140 2e-60
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 140 2e-60
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 134 bits (338), Expect(3) = 9e-63
Identities = 98/337 (29%), Positives = 150/337 (44%), Gaps = 8/337 (2%)
Frame = +1
Query: 928 WIHACVTTAMFSIKINGSLVGYFGGSRGLRQGDPLSPYLFAMVMEVLSMKLN*GTMQQGF 1107
WI C++TA FS+++NG L G+FG SRGLRQG LSPYLF + M VLS ++ + +
Sbjct: 925 WIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSPYLFVICMNVLSHMIDEAAVHRNI 984
Query: 1108 QFHWRTKEINFTRLFFDDDIIIFCHGSLVTVNIINSCIHSFSLYSGLIPNFQKSQCFLAN 1287
+H + ++I T L F DD+++F G ++ + + F+ SGL + +KS +LA
Sbjct: 985 GYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTIYLAG 1044
Query: 1288 TDTNTSQNIISTLGFSCGYL--*NF*ESLLSLQSYSTKIAFLLFXXXXXXXXXXXXXXXX 1461
+ +S+ F+ G L LL+ Q + + L+
Sbjct: 1045 VSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSY 1104
Query: 1462 XXXXXXXXXXXXXXXXXXXKHFILPK-VIRSIQSTLCRFLWKGPSLAEFDAKVVWKFLTL 1638
+ LP IR I+ FLW GP L AK+ W +
Sbjct: 1105 AGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQ 1164
Query: 1639 PVAEGGLDVRSLLDWNKSLIMFHLINLI*FTSKSLWANWVKATVLKGKT--SGKYQLQLI 1812
P EGGL ++SL + NK + LI + T SLW W+ +++ T S + L
Sbjct: 1165 PKKEGGLGIKSLAEANK-VSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTFWSANERSSLG 1223
Query: 1813 ALGFGKL---RPTALQHLQYHVGKGDQISLWHYPWLH 1914
+ + KL R A + V G S W+ W H
Sbjct: 1224 SWMWKKLLKYRELAKSMHKVEVRNGSSTSFWYDHWSH 1260
Score = 131 bits (330), Expect(3) = 9e-63
Identities = 86/215 (40%), Positives = 120/215 (55%), Gaps = 10/215 (4%)
Frame = +2
Query: 236 IHTSQGDLVQGQQAIESEDVAYYKDLFNPV-----GLAPYPDKENLCSFFYKHISSSQAS 400
I + +Q + I+ E ++ + N G++ D NL S+ S + +
Sbjct: 689 IRGPNAETLQTSEEIKGEAERFFNEFLNRQSGDFHGIS-VEDLRNLMSY---RCSVTDQN 744
Query: 401 SLTVQITDEEIFKVLNSMKINKSPGPDG-----FNITFSSTAGILLVLIFLKLSSSSLPP 565
LT ++T EEI KVL +M NKSPGPDG F T+S T + I LP
Sbjct: 745 ILTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPK 804
Query: 566 VACLKSTTIALIPKTDNPSCMTDFRLISCCNTIYK*ISKILSNRLKCVLPSIIDQTQSVF 745
L +T +ALIPK D M D+R ISCCN +YK ISKIL+NRLK +LPS I Q QS F
Sbjct: 805 G--LNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAF 862
Query: 746 VIGRNISDNILLTQKFFRNYHRKSGSPRCALKIDL 850
V R + +N+LL + ++YH++S +PRCA+KID+
Sbjct: 863 VKERLLMENVLLATELVKDYHKESVTPRCAMKIDI 897
Score = 24.3 bits (51), Expect(3) = 9e-63
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = +3
Query: 855 KAFDTICWDFHFDVFKIFQFPS---H*VDSCL 941
KAFD++ W F + + FP H + C+
Sbjct: 899 KAFDSVQWQFLLNTLEALNFPETFRHWIKLCI 930
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 135 bits (339), Expect(3) = 3e-62
Identities = 99/335 (29%), Positives = 149/335 (44%), Gaps = 8/335 (2%)
Frame = +1
Query: 928 WIHACVTTAMFSIKINGSLVGYFGGSRGLRQGDPLSPYLFAMVMEVLSMKLN*GTMQQGF 1107
WI C++TA FS+++NG L G+FG RGLRQG LSPYLF + M VLS ++ + +
Sbjct: 201 WIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNI 260
Query: 1108 QFHWRTKEINFTRLFFDDDIIIFCHGSLVTVNIINSCIHSFSLYSGLIPNFQKSQCFLAN 1287
+H + K+++ T L F DD+++F G +V + + F+ SGL + +KS +LA
Sbjct: 261 GYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAG 320
Query: 1288 TDTNTSQNIISTLGFSCGYL--*NF*ESLLSLQSYSTKIAFLLFXXXXXXXXXXXXXXXX 1461
NI+S F+ G L LL+ Q + + LL
Sbjct: 321 VSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSY 380
Query: 1462 XXXXXXXXXXXXXXXXXXXKHFILPK-VIRSIQSTLCRFLWKGPSLAEFDAKVVWKFLTL 1638
+ LP I+ I+ FLW GP L AK+ W L
Sbjct: 381 AGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCK 440
Query: 1639 PVAEGGLDVRSLLDWNKSLIMFHLINLI*FTSKSLWANWVKATVLKGKT--SGKYQLQLI 1812
EGGL ++SLL+ NK + LI + SLW NWV +++ + S + L
Sbjct: 441 LKQEGGLGIKSLLEANK-VSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLG 499
Query: 1813 ALGFGKL---RPTALQHLQYHVGKGDQISLWHYPW 1908
+ + KL R A + + G S W+ W
Sbjct: 500 SWMWKKLLKYRDVAKSMCKVEIKSGSSTSFWYDNW 534
Score = 129 bits (324), Expect(3) = 3e-62
Identities = 78/172 (45%), Positives = 103/172 (59%), Gaps = 5/172 (2%)
Frame = +2
Query: 350 ENLCSFFYKHISSSQASSLTVQITDEEIFKVLNSMKINKSPGPDG-----FNITFSSTAG 514
+NL SF S++ LT ++T EE KVL +M NK PGPDG F T+S T
Sbjct: 7 QNLMSF---RCSATDQDMLTREVTSEENQKVLFAMPSNKFPGPDGYTSEFFKATWSITGQ 63
Query: 515 ILLVLIFLKLSSSSLPPVACLKSTTIALIPKTDNPSCMTDFRLISCCNTIYK*ISKILSN 694
+ I LP L +T +ALIPK D + M D+R ISCCN IYK ISKI++N
Sbjct: 64 DFIAAIKSFFIKGFLPKG--LNATILALIPKKDEATLMRDYRPISCCNVIYKVISKIIAN 121
Query: 695 RLKCVLPSIIDQTQSVFVIGRNISDNILLTQKFFRNYHRKSGSPRCALKIDL 850
RLK +LP+ I Q QS FV R + +N+LL + ++YH+ S SPRCA+KID+
Sbjct: 122 RLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDI 173
Score = 24.6 bits (52), Expect(3) = 3e-62
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 855 KAFDTICWDFHFDVFKIFQFPSH*VDSCLCH 947
KAFD++ W F + + FP + CH
Sbjct: 175 KAFDSVQWQFLLNTLEALNFPEN-----FCH 200
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 140 bits (354), Expect(3) = 1e-60
Identities = 102/338 (30%), Positives = 148/338 (43%), Gaps = 9/338 (2%)
Frame = +1
Query: 922 IEWIHACVTTAMFSIKINGSLVGYFGGSRGLRQGDPLSPYLFAMVMEVLSMKLN*GTMQQ 1101
I WI+ C+TTA FS+++NG L GYF SRGLRQG LSPYLF + M+VLS L+ +
Sbjct: 626 IHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAAR 685
Query: 1102 GFQFHWRTKEINFTRLFFDDDIIIFCHGSLVTVNIINSCIHSFSLYSGLIPNFQKSQCFL 1281
F +H + K + T L F DD+++ G + ++ I F+ +SGL + +KS +L
Sbjct: 686 HFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYL 745
Query: 1282 ANTDTNTSQNIISTLGFSCGYL--*NF*ESLLSLQSYSTKIAFLLFXXXXXXXXXXXXXX 1455
A + FS G L L++ + +T LL
Sbjct: 746 AGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFL 805
Query: 1456 XXXXXXXXXXXXXXXXXXXXXKHFILP-KVIRSIQSTLCRFLWKGPSLAEFDAKVVWKFL 1632
F LP K IR ++ FLW G + AK+ W +
Sbjct: 806 SYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMV 865
Query: 1633 TLPVAEGGLDVRSLLDWNKSLIMFHLINLI*FTSKSLWANWVKATVLKGKTSGKYQLQLI 1812
P EGGL +RSL + N + L+ I S SLW WV +L+ + + + Q +
Sbjct: 866 CKPKDEGGLGLRSLKEAN-DVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVK-QTV 923
Query: 1813 ALG------FGKLRPTALQHLQYHVGKGDQISLWHYPW 1908
+ G K R A + VG G Q S W+ W
Sbjct: 924 SQGSWIWKKLLKYREVAKTLSKVEVGNGKQTSFWYDNW 961
Score = 114 bits (284), Expect(3) = 1e-60
Identities = 68/160 (42%), Positives = 89/160 (55%), Gaps = 4/160 (2%)
Frame = +2
Query: 383 SSSQASSLTVQITDEEIFKVLNSMKINKSPGPDGFNITFSSTA----GILLVLIFLKLSS 550
S + SL +T EEI KVL M +KSPGPDG+ F G L +
Sbjct: 442 SDADQQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFT 501
Query: 551 SSLPPVACLKSTTIALIPKTDNPSCMTDFRLISCCNTIYK*ISKILSNRLKCVLPSIIDQ 730
P + ST +ALIPK M D+R ISCCN +YK ISKI++NRLK VLP I
Sbjct: 502 KGFLPKG-INSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAG 560
Query: 731 TQSVFVIGRNISDNILLTQKFFRNYHRKSGSPRCALKIDL 850
QS FV R + +N+LL + ++YH+ + S RCA+KID+
Sbjct: 561 NQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDI 600
Score = 28.5 bits (62), Expect(3) = 1e-60
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 855 KAFDTICWDFHFDVFKIFQFPS---H*VDSCL 941
KAFD++ W F +VF I FP H ++ C+
Sbjct: 602 KAFDSVQWPFLINVFTILGFPREFIHWINICI 633
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 140 bits (353), Expect(2) = 2e-60
Identities = 112/343 (32%), Positives = 157/343 (45%), Gaps = 14/343 (4%)
Frame = +1
Query: 922 IEWIHACVTTAMFSIKINGSLVGYFGGSRGLRQGDPLSPYLFAMVMEVLSMKLN*GTMQQ 1101
I WIH C+TT F+I +NG+ G+F ++GLRQGDPLSPYLF + MEV S KL
Sbjct: 480 INWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFS-KLLYSRYDS 538
Query: 1102 GF-QFHWRTKEINFTRLFFDDDIIIFCHGSLVTVNIINSCIHSFSLYSGLIPNFQKSQCF 1278
G+ +H + +++ + L F DD++IF G +++ I + F+ +SGL N KSQ F
Sbjct: 539 GYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLF 598
Query: 1279 LANTDTNTSQNIIS-TLGFSCGYL*NF*ESLLSLQSYSTKIAF-----LLFXXXXXXXXX 1440
A D S+ I S GF G F L L K+ LL
Sbjct: 599 QAGLD--LSERITSAAYGFPAG---TFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSW 653
Query: 1441 XXXXXXXXXXXXXXXXXXXXXXXXXXKHFILPK-VIRSIQSTLCRFLWKGPSLAEFDAKV 1617
F+LPK I+ I+S +FLW G +KV
Sbjct: 654 VSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKV 713
Query: 1618 VWKFLTLPVAEGGLDVRSLLDWNKSLIMFHLINLI*FTSKSLWANWVKATVLKGKTSGKY 1797
W LP +EGGL RS +WNK+L++ LI ++ SLWA W + L G S +
Sbjct: 714 SWVDCCLPKSEGGLGFRSFGEWNKTLLL-RLIWVLFDRDTSLWAQWQRHHRL-GHAS-FW 770
Query: 1798 QLQLIALG------FGKLRPTALQHLQYHVGKGDQISLWHYPW 1908
Q+ + LRP A + ++ VG G +S W W
Sbjct: 771 QVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCW 813
Score = 121 bits (304), Expect(2) = 2e-60
Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 3/205 (1%)
Frame = +2
Query: 245 SQGDLVQGQQAIESEDVAYYKDLFNPVGLAPYPDKENLCSFFYKHISSSQASSLTVQITD 424
S G L+ QQ I V YY+ L + ++E++ S Q S L TD
Sbjct: 250 SNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQEDMNLLLTYRCSQDQCSELEKSFTD 309
Query: 425 EEIFKVLNSMKINKSPGPDGFNITFSSTAGILL---VLIFLKLSSSSLPPVACLKSTTIA 595
+EI S+ NK+ GPDG+++ F ++ VL + S + +TT+
Sbjct: 310 DEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLV 369
Query: 596 LIPKTDNPSCMTDFRLISCCNTIYK*ISKILSNRLKCVLPSIIDQTQSVFVIGRNISDNI 775
LIPKT N +++FR ISC NT+YK ISK+L++RL+ +L ++I +QS F+ GR++++N+
Sbjct: 370 LIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENV 429
Query: 776 LLTQKFFRNYHRKSGSPRCALKIDL 850
LL + Y+R + SPR LK+DL
Sbjct: 430 LLATEMVHGYNRLNISPRGMLKVDL 454
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 140 bits (353), Expect(2) = 2e-60
Identities = 112/343 (32%), Positives = 157/343 (45%), Gaps = 14/343 (4%)
Frame = +1
Query: 922 IEWIHACVTTAMFSIKINGSLVGYFGGSRGLRQGDPLSPYLFAMVMEVLSMKLN*GTMQQ 1101
I WIH C+TT F+I +NG+ G+F ++GLRQGDPLSPYLF + MEV S KL
Sbjct: 480 INWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFS-KLLYSRYDS 538
Query: 1102 GF-QFHWRTKEINFTRLFFDDDIIIFCHGSLVTVNIINSCIHSFSLYSGLIPNFQKSQCF 1278
G+ +H + +++ + L F DD++IF G +++ I + F+ +SGL N KSQ F
Sbjct: 539 GYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLF 598
Query: 1279 LANTDTNTSQNIIS-TLGFSCGYL*NF*ESLLSLQSYSTKIAF-----LLFXXXXXXXXX 1440
A D S+ I S GF G F L L K+ LL
Sbjct: 599 QAGLD--LSERITSAAYGFPAG---TFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSW 653
Query: 1441 XXXXXXXXXXXXXXXXXXXXXXXXXXKHFILPK-VIRSIQSTLCRFLWKGPSLAEFDAKV 1617
F+LPK I+ I+S +FLW G +KV
Sbjct: 654 VSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKV 713
Query: 1618 VWKFLTLPVAEGGLDVRSLLDWNKSLIMFHLINLI*FTSKSLWANWVKATVLKGKTSGKY 1797
W LP +EGGL RS +WNK+L++ LI ++ SLWA W + L G S +
Sbjct: 714 SWVDCCLPKSEGGLGFRSFGEWNKTLLL-RLIWVLFDRDTSLWAQWQRHHRL-GHAS-FW 770
Query: 1798 QLQLIALG------FGKLRPTALQHLQYHVGKGDQISLWHYPW 1908
Q+ + LRP A + ++ VG G +S W W
Sbjct: 771 QVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCW 813
Score = 121 bits (304), Expect(2) = 2e-60
Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 3/205 (1%)
Frame = +2
Query: 245 SQGDLVQGQQAIESEDVAYYKDLFNPVGLAPYPDKENLCSFFYKHISSSQASSLTVQITD 424
S G L+ QQ I V YY+ L + ++E++ S Q S L TD
Sbjct: 250 SNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQEDMNLLLTYRCSQDQCSELEKSFTD 309
Query: 425 EEIFKVLNSMKINKSPGPDGFNITFSSTAGILL---VLIFLKLSSSSLPPVACLKSTTIA 595
+EI S+ NK+ GPDG+++ F ++ VL + S + +TT+
Sbjct: 310 DEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLV 369
Query: 596 LIPKTDNPSCMTDFRLISCCNTIYK*ISKILSNRLKCVLPSIIDQTQSVFVIGRNISDNI 775
LIPKT N +++FR ISC NT+YK ISK+L++RL+ +L ++I +QS F+ GR++++N+
Sbjct: 370 LIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENV 429
Query: 776 LLTQKFFRNYHRKSGSPRCALKIDL 850
LL + Y+R + SPR LK+DL
Sbjct: 430 LLATEMVHGYNRLNISPRGMLKVDL 454