BLASTX nr result

ID: Panax21_contig00027625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027625
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002776218.1| ubiquitin protein ligase PRT1, putative [Per...    67   3e-09
gb|AFG67327.1| Pinus taeda anonymous locus 2_7298_01 genomic seq...    66   5e-09
gb|AFG67337.1| Pinus taeda anonymous locus 2_7298_01 genomic seq...    65   1e-08
gb|AEW08366.1| Pinus taeda anonymous locus 2_7298_01 genomic seq...    65   1e-08
gb|EHJ70168.1| zinc finger protein 364 [Danaus plexippus]              64   2e-08

>ref|XP_002776218.1| ubiquitin protein ligase PRT1, putative [Perkinsus marinus ATCC
           50983] gi|239883026|gb|EER08034.1| ubiquitin protein
           ligase PRT1, putative [Perkinsus marinus ATCC 50983]
          Length = 295

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
 Frame = +3

Query: 117 CVICWENLDLNAGEFVN-NKLPCNHVFHENCIYPWLCRNDTCPLCRYKFPNEEVKWRRTI 293
           C IC    +    E  N   LPC H FH +C+ PWL ++D+CP+CRYK P + VK+ R I
Sbjct: 61  CSICTMEFEKEDAEDSNCTSLPCEHFFHRDCLVPWLEKSDSCPVCRYKLPTDSVKYLREI 120

Query: 294 IPDSQ 308
             D++
Sbjct: 121 GEDAE 125


>gb|AFG67327.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
           gi|383168482|gb|AFG67332.1| Pinus taeda anonymous locus
           2_7298_01 genomic sequence gi|383168485|gb|AFG67335.1|
           Pinus taeda anonymous locus 2_7298_01 genomic sequence
          Length = 132

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 23/57 (40%), Positives = 42/57 (73%)
 Frame = +3

Query: 117 CVICWENLDLNAGEFVNNKLPCNHVFHENCIYPWLCRNDTCPLCRYKFPNEEVKWRR 287
           C +C +  +L  G++   ++PCNHV+H +CI PWL R+++CP+CRY+ P +++++ R
Sbjct: 78  CAVCKDEFEL--GKYAK-RMPCNHVYHADCILPWLARHNSCPVCRYEMPTDDLEYDR 131


>gb|AFG67337.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
          Length = 132

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 22/57 (38%), Positives = 42/57 (73%)
 Frame = +3

Query: 117 CVICWENLDLNAGEFVNNKLPCNHVFHENCIYPWLCRNDTCPLCRYKFPNEEVKWRR 287
           C +C +  +L  G++   ++PCNH++H +CI PWL R+++CP+CRY+ P +++++ R
Sbjct: 78  CAVCKDEFEL--GKYAK-RMPCNHMYHADCILPWLARHNSCPVCRYEMPTDDLEYDR 131


>gb|AEW08366.1| Pinus taeda anonymous locus 2_7298_01 genomic sequence
           gi|383168476|gb|AFG67326.1| Pinus taeda anonymous locus
           2_7298_01 genomic sequence gi|383168478|gb|AFG67328.1|
           Pinus taeda anonymous locus 2_7298_01 genomic sequence
           gi|383168479|gb|AFG67329.1| Pinus taeda anonymous locus
           2_7298_01 genomic sequence gi|383168480|gb|AFG67330.1|
           Pinus taeda anonymous locus 2_7298_01 genomic sequence
           gi|383168481|gb|AFG67331.1| Pinus taeda anonymous locus
           2_7298_01 genomic sequence gi|383168483|gb|AFG67333.1|
           Pinus taeda anonymous locus 2_7298_01 genomic sequence
           gi|383168484|gb|AFG67334.1| Pinus taeda anonymous locus
           2_7298_01 genomic sequence gi|383168486|gb|AFG67336.1|
           Pinus taeda anonymous locus 2_7298_01 genomic sequence
           gi|383168488|gb|AFG67338.1| Pinus taeda anonymous locus
           2_7298_01 genomic sequence gi|383168489|gb|AFG67339.1|
           Pinus taeda anonymous locus 2_7298_01 genomic sequence
           gi|383168490|gb|AFG67340.1| Pinus taeda anonymous locus
           2_7298_01 genomic sequence gi|383168491|gb|AFG67341.1|
           Pinus taeda anonymous locus 2_7298_01 genomic sequence
           gi|383168492|gb|AFG67342.1| Pinus taeda anonymous locus
           2_7298_01 genomic sequence gi|383168493|gb|AFG67343.1|
           Pinus taeda anonymous locus 2_7298_01 genomic sequence
          Length = 132

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 22/57 (38%), Positives = 42/57 (73%)
 Frame = +3

Query: 117 CVICWENLDLNAGEFVNNKLPCNHVFHENCIYPWLCRNDTCPLCRYKFPNEEVKWRR 287
           C +C +  +L  G++   ++PCNH++H +CI PWL R+++CP+CRY+ P +++++ R
Sbjct: 78  CAVCKDEFEL--GKYAK-RMPCNHMYHADCILPWLARHNSCPVCRYEMPTDDLEYDR 131


>gb|EHJ70168.1| zinc finger protein 364 [Danaus plexippus]
          Length = 443

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/76 (42%), Positives = 45/76 (59%)
 Frame = +3

Query: 117 CVICWENLDLNAGEFVNNKLPCNHVFHENCIYPWLCRNDTCPLCRYKFPNEEVKWRRTII 296
           C +CWEN  +  GE V+ +L C HVFH++CI PWL  + TCP+C           RR++I
Sbjct: 256 CSVCWENFQI--GEMVS-RLECEHVFHQSCITPWLQLHATCPIC-----------RRSLI 301

Query: 297 PDSQLPWMMRSSTIAA 344
           PD+  P    ++T AA
Sbjct: 302 PDTPDPPPAATNTTAA 317