BLASTX nr result

ID: Panax21_contig00027590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027590
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275160.1| PREDICTED: WD repeat-containing protein 82-B...    65   4e-14
emb|CBI34875.3| unnamed protein product [Vitis vinifera]               65   4e-14
ref|XP_003547718.1| PREDICTED: WD repeat-containing protein 82-l...    65   6e-14
ref|NP_001056203.1| Os05g0543300 [Oryza sativa Japonica Group] g...    65   7e-14
gb|ACN33682.1| unknown [Zea mays]                                      65   7e-14

>ref|XP_002275160.1| PREDICTED: WD repeat-containing protein 82-B-like [Vitis vinifera]
          Length = 339

 Score = 65.1 bits (157), Expect(2) = 4e-14
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +1

Query: 286 RVVSLCMSPVNDIFMSGSLDYSVRTWDLRVNHCQ 387
           RVVSLCMSP+ND FMSGSLD+SVR WDLRVN CQ
Sbjct: 117 RVVSLCMSPINDSFMSGSLDHSVRIWDLRVNSCQ 150



 Score = 38.5 bits (88), Expect(2) = 4e-14
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = +2

Query: 386 SLQGILRLWGRPAVAYDQQGLAW 454
           S QGILRL GRP VAYDQQGL +
Sbjct: 148 SCQGILRLRGRPTVAYDQQGLVF 170


>emb|CBI34875.3| unnamed protein product [Vitis vinifera]
          Length = 338

 Score = 65.1 bits (157), Expect(2) = 4e-14
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +1

Query: 286 RVVSLCMSPVNDIFMSGSLDYSVRTWDLRVNHCQ 387
           RVVSLCMSP+ND FMSGSLD+SVR WDLRVN CQ
Sbjct: 116 RVVSLCMSPINDSFMSGSLDHSVRIWDLRVNSCQ 149



 Score = 38.5 bits (88), Expect(2) = 4e-14
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = +2

Query: 386 SLQGILRLWGRPAVAYDQQGLAW 454
           S QGILRL GRP VAYDQQGL +
Sbjct: 147 SCQGILRLRGRPTVAYDQQGLVF 169


>ref|XP_003547718.1| PREDICTED: WD repeat-containing protein 82-like [Glycine max]
          Length = 333

 Score = 64.7 bits (156), Expect(2) = 6e-14
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +1

Query: 286 RVVSLCMSPVNDIFMSGSLDYSVRTWDLRVNHCQ 387
           RVVSLCMSP+ND FMSGSLD+SVR WDLRVN CQ
Sbjct: 119 RVVSLCMSPINDSFMSGSLDHSVRIWDLRVNACQ 152



 Score = 38.5 bits (88), Expect(2) = 6e-14
 Identities = 17/21 (80%), Positives = 19/21 (90%)
 Frame = +2

Query: 392 QGILRLWGRPAVAYDQQGLAW 454
           QGILRL GRPA+AYDQQGL +
Sbjct: 152 QGILRLRGRPAIAYDQQGLVF 172


>ref|NP_001056203.1| Os05g0543300 [Oryza sativa Japonica Group]
           gi|52353429|gb|AAU43997.1| unknown protein [Oryza sativa
           Japonica Group] gi|113579754|dbj|BAF18117.1|
           Os05g0543300 [Oryza sativa Japonica Group]
           gi|215737120|dbj|BAG96049.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218197201|gb|EEC79628.1| hypothetical protein
           OsI_20843 [Oryza sativa Indica Group]
          Length = 320

 Score = 65.1 bits (157), Expect(2) = 7e-14
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +1

Query: 286 RVVSLCMSPVNDIFMSGSLDYSVRTWDLRVNHCQ 387
           RVVSLCMSPVND FMSGSLD+SVR WDLRVN CQ
Sbjct: 117 RVVSLCMSPVNDSFMSGSLDHSVRIWDLRVNACQ 150



 Score = 37.7 bits (86), Expect(2) = 7e-14
 Identities = 17/21 (80%), Positives = 19/21 (90%)
 Frame = +2

Query: 392 QGILRLWGRPAVAYDQQGLAW 454
           QGILRL GRP+VAYDQQGL +
Sbjct: 150 QGILRLRGRPSVAYDQQGLVF 170


>gb|ACN33682.1| unknown [Zea mays]
          Length = 318

 Score = 65.1 bits (157), Expect(2) = 7e-14
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +1

Query: 286 RVVSLCMSPVNDIFMSGSLDYSVRTWDLRVNHCQ 387
           RVVSLCMSPVND FMSGSLD+SVR WDLRVN CQ
Sbjct: 117 RVVSLCMSPVNDSFMSGSLDHSVRIWDLRVNACQ 150



 Score = 37.7 bits (86), Expect(2) = 7e-14
 Identities = 17/21 (80%), Positives = 19/21 (90%)
 Frame = +2

Query: 392 QGILRLWGRPAVAYDQQGLAW 454
           QGILRL GRP+VAYDQQGL +
Sbjct: 150 QGILRLRGRPSVAYDQQGLVF 170


Top