BLASTX nr result

ID: Panax21_contig00027565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027565
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324659.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002308090.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
gb|AAY84833.1| isoamylase [Ipomoea batatas]                            62   6e-08
ref|XP_002265964.2| PREDICTED: isoamylase 1, chloroplastic-like ...    59   4e-07
emb|CBI40669.3| unnamed protein product [Vitis vinifera]               59   4e-07

>ref|XP_002324659.1| predicted protein [Populus trichocarpa] gi|222866093|gb|EEF03224.1|
           predicted protein [Populus trichocarpa]
          Length = 801

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 46/116 (39%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
 Frame = -1

Query: 331 LLHSASSFVCIPQNSPFLNLPKQFHTTNLIHSIPRTSSRMKKNF--NLLVNASDA----S 170
           LLHS S  V +      L    QF +T     + R  +   +NF  NL  N++ +    +
Sbjct: 3   LLHSTSHSVHV------LKFISQFRSTPKFCLLKRNVTSNLENFGSNLFSNSTASISIKA 56

Query: 169 XXXXXXXXXXXXXEKPILRPFQVSQGYPTPFGATAREGGVNFAICSTNATSAILCL 2
                        E P LR FQV +G+P+PFGAT R+GGVNFAI S NA SA LCL
Sbjct: 57  ARDGVDTAVVVEEEGPKLRKFQVFEGHPSPFGATVRDGGVNFAIFSANAVSATLCL 112


>ref|XP_002308090.1| predicted protein [Populus trichocarpa] gi|222854066|gb|EEE91613.1|
           predicted protein [Populus trichocarpa]
          Length = 826

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 44/116 (37%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
 Frame = -1

Query: 331 LLHSASSFVCIP------QNSPFLNLPKQFHTTNLIHSIPRTSSRMKKNFNLLVNASDAS 170
           L+HS S  + +P      QN+P    PK+  T+NL        S +  N   L+    AS
Sbjct: 3   LVHSPSHSLQLPKFISHFQNTPKFYPPKRVTTSNL----ETIGSNIFSNSTALIPIKAAS 58

Query: 169 XXXXXXXXXXXXXEKPILRPFQVSQGYPTPFGATAREGGVNFAICSTNATSAILCL 2
                         +P L+  QV +G+P PFGAT R+GGVNFAI S +A SA LCL
Sbjct: 59  EGVDTAVVVVEEE-EPKLKKIQVFEGHPAPFGATVRDGGVNFAIFSADAVSATLCL 113


>gb|AAY84833.1| isoamylase [Ipomoea batatas]
          Length = 785

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 27/40 (67%), Positives = 34/40 (85%)
 Frame = -1

Query: 121 ILRPFQVSQGYPTPFGATAREGGVNFAICSTNATSAILCL 2
           +LR F+V  G+P PFGATAR+GG+NFA+ S+NATSA LCL
Sbjct: 75  LLRRFEVLSGHPAPFGATARDGGINFAVFSSNATSAALCL 114


>ref|XP_002265964.2| PREDICTED: isoamylase 1, chloroplastic-like [Vitis vinifera]
          Length = 748

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = -1

Query: 127 KPILRPFQVSQGYPTPFGATAREGGVNFAICSTNATSAILCL 2
           KP L+PF V +G P P GATAR+GGVNFA+ S NA SA LCL
Sbjct: 24  KPKLQPFLVFEGCPAPLGATARDGGVNFAVYSGNAVSATLCL 65


>emb|CBI40669.3| unnamed protein product [Vitis vinifera]
          Length = 809

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = -1

Query: 127 KPILRPFQVSQGYPTPFGATAREGGVNFAICSTNATSAILCL 2
           KP L+PF V +G P P GATAR+GGVNFA+ S NA SA LCL
Sbjct: 79  KPKLQPFLVFEGCPAPLGATARDGGVNFAVYSGNAVSATLCL 120


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