BLASTX nr result
ID: Panax21_contig00027555
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00027555
(1279 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [... 126 2e-42
ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|2... 115 1e-41
ref|NP_001078133.1| reticulon-like protein B16 [Arabidopsis thal... 103 3e-35
ref|NP_974275.1| reticulon-like protein B16 [Arabidopsis thalian... 103 3e-35
ref|XP_004138395.1| PREDICTED: reticulon-like protein B16-like [... 102 9e-35
>ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [Vitis vinifera]
gi|297736488|emb|CBI25359.3| unnamed protein product
[Vitis vinifera]
Length = 227
Score = 126 bits (316), Expect(2) = 2e-42
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = -3
Query: 953 YRLFGGHTSIHQMMGGGKAADVILWKRGYVSCAIIVVATVAWLLFERAGLSFLTICSNXX 774
YRLF +SIHQ+MGGGKAADV+LWKR VSC IVVATVAW+LFER+GLSFL+ICS+
Sbjct: 24 YRLFDRRSSIHQIMGGGKAADVLLWKRRRVSCGTIVVATVAWILFERSGLSFLSICSDVL 83
Query: 773 XXXXXXXXLRANYADFRNIQLQTLPELVLSEEMV 672
LRANYA FRN QL++LPEL LSEEMV
Sbjct: 84 LILIVVLFLRANYAAFRNKQLKSLPELELSEEMV 117
Score = 73.9 bits (180), Expect(2) = 2e-42
Identities = 35/74 (47%), Positives = 46/74 (62%)
Frame = -1
Query: 592 LWLFSVIGSFXXXXXXXXXXXXXXXXIPALYNRYENQVDRYAGFIHQKISRHYKFVDGSV 413
LWL SV+GS +PALY++YE VD+Y G IH+K S+HYK VD +V
Sbjct: 154 LWLLSVVGSSFSFFTLAYIGTIISITVPALYSKYEEHVDKYFGIIHRKFSKHYKLVDENV 213
Query: 412 ISRLPRSLSKDKDS 371
I R+P LSKDK++
Sbjct: 214 IRRIPPGLSKDKET 227
>ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|222862357|gb|EEE99863.1|
predicted protein [Populus trichocarpa]
Length = 244
Score = 115 bits (287), Expect(2) = 1e-41
Identities = 60/105 (57%), Positives = 74/105 (70%)
Frame = -3
Query: 986 AGATPPPPLSTYRLFGGHTSIHQMMGGGKAADVILWKRGYVSCAIIVVATVAWLLFERAG 807
A ++P S YRLF S+HQ+MG GKAADV+LWK +VS +I+VATV+W +FER+G
Sbjct: 30 APSSPRAITSGYRLFDRQDSLHQLMGAGKAADVLLWKWWHVSFGVIMVATVSWFIFERSG 89
Query: 806 LSFLTICSNXXXXXXXXXXLRANYADFRNIQLQTLPELVLSEEMV 672
L FLTICS+ +RAN AD N QLQ+LPELVLSEEMV
Sbjct: 90 LPFLTICSDVLLILIVLLFVRANIADMINKQLQSLPELVLSEEMV 134
Score = 82.8 bits (203), Expect(2) = 1e-41
Identities = 41/74 (55%), Positives = 49/74 (66%)
Frame = -1
Query: 592 LWLFSVIGSFXXXXXXXXXXXXXXXXIPALYNRYENQVDRYAGFIHQKISRHYKFVDGSV 413
LWL S +GS+ IPALY+RYE +VDR G IH+K+S HYK VD SV
Sbjct: 171 LWLLSTVGSYFSFFTLAYIGTILSITIPALYSRYEERVDRCCGIIHRKLSHHYKIVDESV 230
Query: 412 ISRLPRSLSKDKDS 371
ISR+P+SLSKDKDS
Sbjct: 231 ISRIPQSLSKDKDS 244
>ref|NP_001078133.1| reticulon-like protein B16 [Arabidopsis thaliana]
gi|332641453|gb|AEE74974.1| reticulon-like protein B16
[Arabidopsis thaliana]
Length = 227
Score = 103 bits (256), Expect(2) = 3e-35
Identities = 49/96 (51%), Positives = 68/96 (70%)
Frame = -3
Query: 959 STYRLFGGHTSIHQMMGGGKAADVILWKRGYVSCAIIVVATVAWLLFERAGLSFLTICSN 780
S YRL G ++HQ MGGGKAAD++LW+R ++S +I+++TVAWL+FE +GL FL++ S+
Sbjct: 21 SDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSD 80
Query: 779 XXXXXXXXXXLRANYADFRNIQLQTLPELVLSEEMV 672
+ A + FRN QL +LPELVLSEEMV
Sbjct: 81 VLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMV 116
Score = 73.2 bits (178), Expect(2) = 3e-35
Identities = 37/74 (50%), Positives = 48/74 (64%)
Frame = -1
Query: 592 LWLFSVIGSFXXXXXXXXXXXXXXXXIPALYNRYENQVDRYAGFIHQKISRHYKFVDGSV 413
LWL S IGS+ IPALY++Y+++VD+ G IH+++S HYK VD +V
Sbjct: 154 LWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENV 213
Query: 412 ISRLPRSLSKDKDS 371
ISRL SLSKDKDS
Sbjct: 214 ISRLSWSLSKDKDS 227
>ref|NP_974275.1| reticulon-like protein B16 [Arabidopsis thaliana]
gi|75151434|sp|Q8GYH6.1|RTNLP_ARATH RecName:
Full=Reticulon-like protein B16; Short=AtRTNLB16
gi|26450318|dbj|BAC42275.1| unknown protein [Arabidopsis
thaliana] gi|28827594|gb|AAO50641.1| unknown protein
[Arabidopsis thaliana] gi|332641451|gb|AEE74972.1|
reticulon-like protein B16 [Arabidopsis thaliana]
Length = 226
Score = 103 bits (256), Expect(2) = 3e-35
Identities = 49/96 (51%), Positives = 68/96 (70%)
Frame = -3
Query: 959 STYRLFGGHTSIHQMMGGGKAADVILWKRGYVSCAIIVVATVAWLLFERAGLSFLTICSN 780
S YRL G ++HQ MGGGKAAD++LW+R ++S +I+++TVAWL+FE +GL FL++ S+
Sbjct: 21 SDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSD 80
Query: 779 XXXXXXXXXXLRANYADFRNIQLQTLPELVLSEEMV 672
+ A + FRN QL +LPELVLSEEMV
Sbjct: 81 VLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMV 116
Score = 73.2 bits (178), Expect(2) = 3e-35
Identities = 37/74 (50%), Positives = 48/74 (64%)
Frame = -1
Query: 592 LWLFSVIGSFXXXXXXXXXXXXXXXXIPALYNRYENQVDRYAGFIHQKISRHYKFVDGSV 413
LWL S IGS+ IPALY++Y+++VD+ G IH+++S HYK VD +V
Sbjct: 153 LWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENV 212
Query: 412 ISRLPRSLSKDKDS 371
ISRL SLSKDKDS
Sbjct: 213 ISRLSWSLSKDKDS 226
>ref|XP_004138395.1| PREDICTED: reticulon-like protein B16-like [Cucumis sativus]
gi|449514721|ref|XP_004164461.1| PREDICTED:
reticulon-like protein B16-like [Cucumis sativus]
Length = 224
Score = 102 bits (254), Expect(2) = 9e-35
Identities = 51/87 (58%), Positives = 63/87 (72%)
Frame = -3
Query: 932 TSIHQMMGGGKAADVILWKRGYVSCAIIVVATVAWLLFERAGLSFLTICSNXXXXXXXXX 753
T +HQ MGGGKAAD++LWK+ +VS ++VV+TV WLL E +GL LT CS+
Sbjct: 28 TLLHQSMGGGKAADILLWKQWHVSIGVLVVSTVFWLLIEHSGLPLLTTCSDVLLILVVLL 87
Query: 752 XLRANYADFRNIQLQTLPELVLSEEMV 672
LRAN+A FRN QLQTLP+LVLSEE V
Sbjct: 88 FLRANFAAFRNKQLQTLPQLVLSEEFV 114
Score = 72.4 bits (176), Expect(2) = 9e-35
Identities = 35/73 (47%), Positives = 44/73 (60%)
Frame = -1
Query: 592 LWLFSVIGSFXXXXXXXXXXXXXXXXIPALYNRYENQVDRYAGFIHQKISRHYKFVDGSV 413
LWL SV+GS+ IPALY++Y+ VDRY G I Q+ +HY+ +D SV
Sbjct: 151 LWLLSVVGSYVSFFTFAYVGTIISITIPALYSKYDKHVDRYCGMIRQQFRKHYRVMDESV 210
Query: 412 ISRLPRSLSKDKD 374
SRLP LSKDKD
Sbjct: 211 FSRLPGGLSKDKD 223