BLASTX nr result

ID: Panax21_contig00027536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027536
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152640.1| PREDICTED: TRM112-like protein At1g78190-lik...   178   7e-43
ref|XP_002280169.1| PREDICTED: TRM112-like protein At1g78190 [Vi...   178   9e-43
ref|XP_002530505.1| Protein trm112, putative [Ricinus communis] ...   176   5e-42
ref|XP_002302295.1| predicted protein [Populus trichocarpa] gi|2...   169   4e-40
ref|XP_003594444.1| TRM112-like protein [Medicago truncatula] gi...   167   1e-39

>ref|XP_004152640.1| PREDICTED: TRM112-like protein At1g78190-like [Cucumis sativus]
           gi|449503943|ref|XP_004162234.1| PREDICTED: TRM112-like
           protein At1g78190-like [Cucumis sativus]
          Length = 122

 Score =  178 bits (452), Expect = 7e-43
 Identities = 88/123 (71%), Positives = 99/123 (80%)
 Frame = +2

Query: 128 MRLLTHNMLSSNIKGVTNGFPLQIEAEKVIERQVDFNADFLKNMFAKVEWKPLVEASKTM 307
           MRLLTHNMLSSNIKGV NGFPL+IE EKV+E+ VDFN DFLKNMF+K+EWKPLV+AS+TM
Sbjct: 1   MRLLTHNMLSSNIKGVINGFPLRIEVEKVVEKPVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 308 GYAELPDEAPEQSALDSGDFLRKFXXXXXXXXXXXXXXVCPETGRRFPVNKGIPNMLLHE 487
           GYAELP+EA + S LDS DFL++F               CPET RRFPVNKGIPNMLLHE
Sbjct: 61  GYAELPEEA-DASMLDSHDFLQRFHHALLELHLEEGALFCPETNRRFPVNKGIPNMLLHE 119

Query: 488 DEV 496
           DEV
Sbjct: 120 DEV 122


>ref|XP_002280169.1| PREDICTED: TRM112-like protein At1g78190 [Vitis vinifera]
           gi|296087709|emb|CBI34965.3| unnamed protein product
           [Vitis vinifera]
          Length = 122

 Score =  178 bits (451), Expect = 9e-43
 Identities = 86/123 (69%), Positives = 99/123 (80%)
 Frame = +2

Query: 128 MRLLTHNMLSSNIKGVTNGFPLQIEAEKVIERQVDFNADFLKNMFAKVEWKPLVEASKTM 307
           MRLLTHNMLSSNIKGVTNGFPL++E EK++E+QVDFNADFLKNMF K+EWK L +A++TM
Sbjct: 1   MRLLTHNMLSSNIKGVTNGFPLRVEVEKMVEKQVDFNADFLKNMFTKIEWKALFDAAQTM 60

Query: 308 GYAELPDEAPEQSALDSGDFLRKFXXXXXXXXXXXXXXVCPETGRRFPVNKGIPNMLLHE 487
           GY +LP EA E S LDS +FL+KF              +CPETGRRFPVNKGIPNMLLHE
Sbjct: 61  GYTDLPAEA-ESSMLDSDEFLKKFHHALLELHLEEGALICPETGRRFPVNKGIPNMLLHE 119

Query: 488 DEV 496
           DEV
Sbjct: 120 DEV 122


>ref|XP_002530505.1| Protein trm112, putative [Ricinus communis]
           gi|223529962|gb|EEF31889.1| Protein trm112, putative
           [Ricinus communis]
          Length = 122

 Score =  176 bits (445), Expect = 5e-42
 Identities = 85/123 (69%), Positives = 99/123 (80%)
 Frame = +2

Query: 128 MRLLTHNMLSSNIKGVTNGFPLQIEAEKVIERQVDFNADFLKNMFAKVEWKPLVEASKTM 307
           MRLLTHNMLSSNIKGV NGFPL+IE +KVIE++VDFN DFLKNMF+K+EWK LV+A++TM
Sbjct: 1   MRLLTHNMLSSNIKGVANGFPLRIEVQKVIEKEVDFNPDFLKNMFSKIEWKALVDAARTM 60

Query: 308 GYAELPDEAPEQSALDSGDFLRKFXXXXXXXXXXXXXXVCPETGRRFPVNKGIPNMLLHE 487
           GY ELPD A E S L+S +F+RKF              +CPETGR+FPVNKGIPNMLLHE
Sbjct: 61  GYTELPD-AAESSMLESEEFMRKFHHALLEVDLEEGALICPETGRKFPVNKGIPNMLLHE 119

Query: 488 DEV 496
           DEV
Sbjct: 120 DEV 122


>ref|XP_002302295.1| predicted protein [Populus trichocarpa] gi|222844021|gb|EEE81568.1|
           predicted protein [Populus trichocarpa]
          Length = 122

 Score =  169 bits (428), Expect = 4e-40
 Identities = 82/123 (66%), Positives = 97/123 (78%)
 Frame = +2

Query: 128 MRLLTHNMLSSNIKGVTNGFPLQIEAEKVIERQVDFNADFLKNMFAKVEWKPLVEASKTM 307
           MRL THNMLSSNIKGV NGFPL+IE ++V+E+QVDFN DFL+NMF K+EWK LV+A++TM
Sbjct: 1   MRLFTHNMLSSNIKGVANGFPLRIEVDQVVEKQVDFNPDFLRNMFPKLEWKALVDAARTM 60

Query: 308 GYAELPDEAPEQSALDSGDFLRKFXXXXXXXXXXXXXXVCPETGRRFPVNKGIPNMLLHE 487
           GY ELP+EA + S L+S +FLRK               VCPETGR+FPVNKGIPNMLLHE
Sbjct: 61  GYTELPEEA-DSSMLESEEFLRKLHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLHE 119

Query: 488 DEV 496
           DEV
Sbjct: 120 DEV 122


>ref|XP_003594444.1| TRM112-like protein [Medicago truncatula]
           gi|355483492|gb|AES64695.1| TRM112-like protein
           [Medicago truncatula]
          Length = 122

 Score =  167 bits (424), Expect = 1e-39
 Identities = 83/123 (67%), Positives = 93/123 (75%)
 Frame = +2

Query: 128 MRLLTHNMLSSNIKGVTNGFPLQIEAEKVIERQVDFNADFLKNMFAKVEWKPLVEASKTM 307
           MRLLTHNMLSSNIKGV NGFPL+IEAEKV+E+ V+ N DFLK MF K+EWK  VEAS+ M
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEAEKVVEKNVEMNGDFLKKMFEKIEWKAFVEASRGM 60

Query: 308 GYAELPDEAPEQSALDSGDFLRKFXXXXXXXXXXXXXXVCPETGRRFPVNKGIPNMLLHE 487
           GY ELP+EA + S LDS +FL +F              VCPETGRRFPV KGIPNMLLHE
Sbjct: 61  GYTELPEEA-DSSMLDSNEFLNRFHHALLELHLEEGALVCPETGRRFPVKKGIPNMLLHE 119

Query: 488 DEV 496
           DEV
Sbjct: 120 DEV 122


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