BLASTX nr result

ID: Panax21_contig00026450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026450
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera]   104   7e-46
gb|AFW86910.1| putative cytochrome C oxidase subunit II family p...   103   1e-20
tpg|DAA38266.1| TPA: putative cytochrome C oxidase subunit II fa...    96   3e-18
ref|YP_004222255.1| hypothetical protein BevumaM_p016 [Beta vulg...    69   4e-10

>emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera]
          Length = 201

 Score =  104 bits (260), Expect(2) = 7e-46
 Identities = 52/54 (96%), Positives = 53/54 (98%)
 Frame = +1

Query: 22  MVREASGLPVISHSRRRDTFITIACQKRGVEVVRPIPRNAPSIGAYGSILVVAG 183
           MVREASGLPVISHSRRR+T ITIACQKRGVEVVRPIPRNAPSIGAYGSILVVAG
Sbjct: 1   MVREASGLPVISHSRRRETLITIACQKRGVEVVRPIPRNAPSIGAYGSILVVAG 54



 Score =  104 bits (260), Expect(2) = 7e-46
 Identities = 49/65 (75%), Positives = 50/65 (76%)
 Frame = +2

Query: 290 VAYNFGPNGRPSNLSEWGIPVGNNHGSSCGTTGPGEDNXXXXXXXXRFGDGGPTVGNSRH 469
           VAYNFGPNGRPSNLSEWGIPVGNNHGSSCGTTGPGEDN        RFGDGGPT G    
Sbjct: 55  VAYNFGPNGRPSNLSEWGIPVGNNHGSSCGTTGPGEDNLLFLLLFLRFGDGGPT-GRGSS 113

Query: 470 KQLDR 484
            + DR
Sbjct: 114 MRSDR 118


>gb|AFW86910.1| putative cytochrome C oxidase subunit II family protein [Zea mays]
          Length = 70

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/70 (77%), Positives = 56/70 (80%)
 Frame = +3

Query: 243 MSDNGAEVVNLSAP*RWHTTLDLTAGPVTFRNGGSPLATTTVVVAELPGRERXXXXXXXX 422
           MSDNGA VVNLSAP +WHTTLDL AGPVTFRNGGSPLATTTVVVAEL G+ER        
Sbjct: 1   MSDNGASVVNLSAPQQWHTTLDLRAGPVTFRNGGSPLATTTVVVAELLGQERTTCCSCSS 60

Query: 423 XXASGTEVLR 452
             ASGTEVLR
Sbjct: 61  FFASGTEVLR 70


>tpg|DAA38266.1| TPA: putative cytochrome C oxidase subunit II family protein [Zea
           mays]
          Length = 510

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 45/60 (75%), Positives = 45/60 (75%)
 Frame = +2

Query: 281 TIAVAYNFGPNGRPSNLSEWGIPVGNNHGSSCGTTGPGEDNXXXXXXXXRFGDGGPTVGN 460
           T AVAYNFGP GRP  LSEWGIPVGNNHGSSCGTTGP EDN        RFGDGG TV N
Sbjct: 357 TGAVAYNFGPKGRPRYLSEWGIPVGNNHGSSCGTTGPREDNLLFLLLLLRFGDGGHTVSN 416


>ref|YP_004222255.1| hypothetical protein BevumaM_p016 [Beta vulgaris subsp. maritima]
           gi|346683133|ref|YP_004842062.1| hypothetical protein
           BemaM_p014 [Beta macrocarpa]
           gi|317905693|emb|CBX33235.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439773|emb|CBX33287.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148025|emb|CBJ20690.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500051|emb|CBX24867.1|
           hypothetical protein [Beta macrocarpa]
           gi|384939217|emb|CBL52063.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 178

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = +3

Query: 3   KCLKVEYGSRSIWLTGNLPFPPSRYFHNYSMPETGS 110
           KCLKVEY S+SIWLTGNLPFP SR F NYSMPETGS
Sbjct: 143 KCLKVEYSSQSIWLTGNLPFPSSRDFSNYSMPETGS 178


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