BLASTX nr result

ID: Panax21_contig00026328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026328
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like...    82   2e-29
ref|XP_002330211.1| predicted protein [Populus trichocarpa] gi|2...    83   8e-29
ref|XP_002512419.1| DNA helicase, putative [Ricinus communis] gi...    79   7e-26
emb|CBI39502.3| unnamed protein product [Vitis vinifera]               82   3e-25
ref|XP_003591139.1| ATP-dependent DNA helicase Q4 [Medicago trun...    82   8e-24

>ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Vitis
           vinifera]
          Length = 893

 Score = 82.4 bits (202), Expect(2) = 2e-29
 Identities = 39/60 (65%), Positives = 49/60 (81%)
 Frame = +2

Query: 239 GVSDTTDLPKRPEERPEVLQGPLEHGPSIIYAPTRKETLSISKFLCKFGVKAAAYNAKLP 418
           G S+T D   + +ER  +L+GPLE GP+IIY PTRKETL+I+K+LC+ GVKAAAYNAKLP
Sbjct: 507 GSSETLDPSMKLDERLTLLKGPLEQGPTIIYVPTRKETLNIAKYLCRCGVKAAAYNAKLP 566



 Score = 71.6 bits (174), Expect(2) = 2e-29
 Identities = 36/69 (52%), Positives = 46/69 (66%)
 Frame = +1

Query: 1   SASESDGTYNNSLDNIEYDAFSGNSDQVRLQKENSSSASKDKKMSVEYLEDECDLFQDVD 180
           S SE+D    + ++N     F  N D+    +EN S+ASK ++MSVEYLE+E DLFQ VD
Sbjct: 428 SLSEADRMSPSDVENNGDGYFGENDDEANSSQENGSAASKQRQMSVEYLENEVDLFQSVD 487

Query: 181 DLDVSCGEF 207
           D DVSCGEF
Sbjct: 488 DWDVSCGEF 496


>ref|XP_002330211.1| predicted protein [Populus trichocarpa] gi|222871667|gb|EEF08798.1|
           predicted protein [Populus trichocarpa]
          Length = 1048

 Score = 83.2 bits (204), Expect(2) = 8e-29
 Identities = 40/68 (58%), Positives = 50/68 (73%)
 Frame = +2

Query: 215 PTKDCDACGVSDTTDLPKRPEERPEVLQGPLEHGPSIIYAPTRKETLSISKFLCKFGVKA 394
           P KD   C  S+T D   + E+R ++LQ PLE G +IIY PTRK+TLSI+++LC FGVKA
Sbjct: 499 PCKDQYICKSSETVDPSSKIEDRSKLLQAPLEEGATIIYVPTRKQTLSITEYLCGFGVKA 558

Query: 395 AAYNAKLP 418
           AAYNA LP
Sbjct: 559 AAYNASLP 566



 Score = 68.9 bits (167), Expect(2) = 8e-29
 Identities = 32/69 (46%), Positives = 48/69 (69%)
 Frame = +1

Query: 1   SASESDGTYNNSLDNIEYDAFSGNSDQVRLQKENSSSASKDKKMSVEYLEDECDLFQDVD 180
           S S+ D +  N ++ IE D    + D++ L KEN  +AS++K+MS+EYLE++ D+F  VD
Sbjct: 426 SISDGDVSSPNDMNRIEDDCCDVDGDELNLTKENGLTASREKEMSIEYLENDVDVFHIVD 485

Query: 181 DLDVSCGEF 207
           D DV+CGEF
Sbjct: 486 DWDVACGEF 494


>ref|XP_002512419.1| DNA helicase, putative [Ricinus communis]
           gi|223548380|gb|EEF49871.1| DNA helicase, putative
           [Ricinus communis]
          Length = 803

 Score = 79.3 bits (194), Expect(2) = 7e-26
 Identities = 39/68 (57%), Positives = 46/68 (67%)
 Frame = +2

Query: 215 PTKDCDACGVSDTTDLPKRPEERPEVLQGPLEHGPSIIYAPTRKETLSISKFLCKFGVKA 394
           P  D D   +  T D P   EER ++LQ PL  GP+IIY PTRKETL I+ +LC FG+KA
Sbjct: 405 PCNDWDVHKLPKTVDPPCAAEERLKLLQEPLREGPTIIYVPTRKETLRIANYLCDFGLKA 464

Query: 395 AAYNAKLP 418
           AAYNA LP
Sbjct: 465 AAYNASLP 472



 Score = 62.8 bits (151), Expect(2) = 7e-26
 Identities = 30/69 (43%), Positives = 48/69 (69%)
 Frame = +1

Query: 1   SASESDGTYNNSLDNIEYDAFSGNSDQVRLQKENSSSASKDKKMSVEYLEDECDLFQDVD 180
           S SE D   ++ + + E +    + D+V L KEN S+AS+ K++S++YLE++ D+FQ+VD
Sbjct: 332 SLSEEDVFSSSGMISTEDECSDVDDDEVTLTKENGSTASEGKRLSIDYLENDVDIFQNVD 391

Query: 181 DLDVSCGEF 207
           D DV+ GEF
Sbjct: 392 DWDVAFGEF 400


>emb|CBI39502.3| unnamed protein product [Vitis vinifera]
          Length = 1537

 Score = 82.4 bits (202), Expect(2) = 3e-25
 Identities = 39/60 (65%), Positives = 49/60 (81%)
 Frame = +2

Query: 239 GVSDTTDLPKRPEERPEVLQGPLEHGPSIIYAPTRKETLSISKFLCKFGVKAAAYNAKLP 418
           G S+T D   + +ER  +L+GPLE GP+IIY PTRKETL+I+K+LC+ GVKAAAYNAKLP
Sbjct: 466 GSSETLDPSMKLDERLTLLKGPLEQGPTIIYVPTRKETLNIAKYLCRCGVKAAAYNAKLP 525



 Score = 57.8 bits (138), Expect(2) = 3e-25
 Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 6/67 (8%)
 Frame = +1

Query: 25  YNNSLDNIEYDAFSG------NSDQVRLQKENSSSASKDKKMSVEYLEDECDLFQDVDDL 186
           ++  LD+   D+ S        +D++      +++ASK ++MSVEYLE+E DLFQ VDD 
Sbjct: 389 FSQELDDASDDSTSSADRSLSEADRMSPSDVENNAASKQRQMSVEYLENEVDLFQSVDDW 448

Query: 187 DVSCGEF 207
           DVSCGEF
Sbjct: 449 DVSCGEF 455


>ref|XP_003591139.1| ATP-dependent DNA helicase Q4 [Medicago truncatula]
           gi|355480187|gb|AES61390.1| ATP-dependent DNA helicase
           Q4 [Medicago truncatula]
          Length = 903

 Score = 82.0 bits (201), Expect(2) = 8e-24
 Identities = 39/68 (57%), Positives = 52/68 (76%)
 Frame = +2

Query: 215 PTKDCDACGVSDTTDLPKRPEERPEVLQGPLEHGPSIIYAPTRKETLSISKFLCKFGVKA 394
           P K C+   +S+T D P +PE+R ++L+ PL  GP+IIY PTRK+T+ I+K+LCK GVKA
Sbjct: 477 PPKQCE---LSETIDTPTKPEKRLKMLKEPLGQGPTIIYVPTRKDTVRIAKYLCKSGVKA 533

Query: 395 AAYNAKLP 418
           AAYNA LP
Sbjct: 534 AAYNAGLP 541



 Score = 53.1 bits (126), Expect(2) = 8e-24
 Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 10/79 (12%)
 Frame = +1

Query: 1   SASESDGTYNNS----LDNIEYDAFSGNSDQVR------LQKENSSSASKDKKMSVEYLE 150
           ++ ++DG   +S     D++  D   GN D         +   N+S+  K +K+++E+LE
Sbjct: 394 TSGDADGVSISSDASDTDSVSSDDVDGNQDDCDDRDINVMHSGNTSNHKKRRKLTIEFLE 453

Query: 151 DECDLFQDVDDLDVSCGEF 207
           ++ D+FQ  DDLDV+CGEF
Sbjct: 454 NDVDVFQSADDLDVTCGEF 472


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