BLASTX nr result
ID: Panax21_contig00026328
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00026328 (418 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like... 82 2e-29 ref|XP_002330211.1| predicted protein [Populus trichocarpa] gi|2... 83 8e-29 ref|XP_002512419.1| DNA helicase, putative [Ricinus communis] gi... 79 7e-26 emb|CBI39502.3| unnamed protein product [Vitis vinifera] 82 3e-25 ref|XP_003591139.1| ATP-dependent DNA helicase Q4 [Medicago trun... 82 8e-24 >ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Vitis vinifera] Length = 893 Score = 82.4 bits (202), Expect(2) = 2e-29 Identities = 39/60 (65%), Positives = 49/60 (81%) Frame = +2 Query: 239 GVSDTTDLPKRPEERPEVLQGPLEHGPSIIYAPTRKETLSISKFLCKFGVKAAAYNAKLP 418 G S+T D + +ER +L+GPLE GP+IIY PTRKETL+I+K+LC+ GVKAAAYNAKLP Sbjct: 507 GSSETLDPSMKLDERLTLLKGPLEQGPTIIYVPTRKETLNIAKYLCRCGVKAAAYNAKLP 566 Score = 71.6 bits (174), Expect(2) = 2e-29 Identities = 36/69 (52%), Positives = 46/69 (66%) Frame = +1 Query: 1 SASESDGTYNNSLDNIEYDAFSGNSDQVRLQKENSSSASKDKKMSVEYLEDECDLFQDVD 180 S SE+D + ++N F N D+ +EN S+ASK ++MSVEYLE+E DLFQ VD Sbjct: 428 SLSEADRMSPSDVENNGDGYFGENDDEANSSQENGSAASKQRQMSVEYLENEVDLFQSVD 487 Query: 181 DLDVSCGEF 207 D DVSCGEF Sbjct: 488 DWDVSCGEF 496 >ref|XP_002330211.1| predicted protein [Populus trichocarpa] gi|222871667|gb|EEF08798.1| predicted protein [Populus trichocarpa] Length = 1048 Score = 83.2 bits (204), Expect(2) = 8e-29 Identities = 40/68 (58%), Positives = 50/68 (73%) Frame = +2 Query: 215 PTKDCDACGVSDTTDLPKRPEERPEVLQGPLEHGPSIIYAPTRKETLSISKFLCKFGVKA 394 P KD C S+T D + E+R ++LQ PLE G +IIY PTRK+TLSI+++LC FGVKA Sbjct: 499 PCKDQYICKSSETVDPSSKIEDRSKLLQAPLEEGATIIYVPTRKQTLSITEYLCGFGVKA 558 Query: 395 AAYNAKLP 418 AAYNA LP Sbjct: 559 AAYNASLP 566 Score = 68.9 bits (167), Expect(2) = 8e-29 Identities = 32/69 (46%), Positives = 48/69 (69%) Frame = +1 Query: 1 SASESDGTYNNSLDNIEYDAFSGNSDQVRLQKENSSSASKDKKMSVEYLEDECDLFQDVD 180 S S+ D + N ++ IE D + D++ L KEN +AS++K+MS+EYLE++ D+F VD Sbjct: 426 SISDGDVSSPNDMNRIEDDCCDVDGDELNLTKENGLTASREKEMSIEYLENDVDVFHIVD 485 Query: 181 DLDVSCGEF 207 D DV+CGEF Sbjct: 486 DWDVACGEF 494 >ref|XP_002512419.1| DNA helicase, putative [Ricinus communis] gi|223548380|gb|EEF49871.1| DNA helicase, putative [Ricinus communis] Length = 803 Score = 79.3 bits (194), Expect(2) = 7e-26 Identities = 39/68 (57%), Positives = 46/68 (67%) Frame = +2 Query: 215 PTKDCDACGVSDTTDLPKRPEERPEVLQGPLEHGPSIIYAPTRKETLSISKFLCKFGVKA 394 P D D + T D P EER ++LQ PL GP+IIY PTRKETL I+ +LC FG+KA Sbjct: 405 PCNDWDVHKLPKTVDPPCAAEERLKLLQEPLREGPTIIYVPTRKETLRIANYLCDFGLKA 464 Query: 395 AAYNAKLP 418 AAYNA LP Sbjct: 465 AAYNASLP 472 Score = 62.8 bits (151), Expect(2) = 7e-26 Identities = 30/69 (43%), Positives = 48/69 (69%) Frame = +1 Query: 1 SASESDGTYNNSLDNIEYDAFSGNSDQVRLQKENSSSASKDKKMSVEYLEDECDLFQDVD 180 S SE D ++ + + E + + D+V L KEN S+AS+ K++S++YLE++ D+FQ+VD Sbjct: 332 SLSEEDVFSSSGMISTEDECSDVDDDEVTLTKENGSTASEGKRLSIDYLENDVDIFQNVD 391 Query: 181 DLDVSCGEF 207 D DV+ GEF Sbjct: 392 DWDVAFGEF 400 >emb|CBI39502.3| unnamed protein product [Vitis vinifera] Length = 1537 Score = 82.4 bits (202), Expect(2) = 3e-25 Identities = 39/60 (65%), Positives = 49/60 (81%) Frame = +2 Query: 239 GVSDTTDLPKRPEERPEVLQGPLEHGPSIIYAPTRKETLSISKFLCKFGVKAAAYNAKLP 418 G S+T D + +ER +L+GPLE GP+IIY PTRKETL+I+K+LC+ GVKAAAYNAKLP Sbjct: 466 GSSETLDPSMKLDERLTLLKGPLEQGPTIIYVPTRKETLNIAKYLCRCGVKAAAYNAKLP 525 Score = 57.8 bits (138), Expect(2) = 3e-25 Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 6/67 (8%) Frame = +1 Query: 25 YNNSLDNIEYDAFSG------NSDQVRLQKENSSSASKDKKMSVEYLEDECDLFQDVDDL 186 ++ LD+ D+ S +D++ +++ASK ++MSVEYLE+E DLFQ VDD Sbjct: 389 FSQELDDASDDSTSSADRSLSEADRMSPSDVENNAASKQRQMSVEYLENEVDLFQSVDDW 448 Query: 187 DVSCGEF 207 DVSCGEF Sbjct: 449 DVSCGEF 455 >ref|XP_003591139.1| ATP-dependent DNA helicase Q4 [Medicago truncatula] gi|355480187|gb|AES61390.1| ATP-dependent DNA helicase Q4 [Medicago truncatula] Length = 903 Score = 82.0 bits (201), Expect(2) = 8e-24 Identities = 39/68 (57%), Positives = 52/68 (76%) Frame = +2 Query: 215 PTKDCDACGVSDTTDLPKRPEERPEVLQGPLEHGPSIIYAPTRKETLSISKFLCKFGVKA 394 P K C+ +S+T D P +PE+R ++L+ PL GP+IIY PTRK+T+ I+K+LCK GVKA Sbjct: 477 PPKQCE---LSETIDTPTKPEKRLKMLKEPLGQGPTIIYVPTRKDTVRIAKYLCKSGVKA 533 Query: 395 AAYNAKLP 418 AAYNA LP Sbjct: 534 AAYNAGLP 541 Score = 53.1 bits (126), Expect(2) = 8e-24 Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 10/79 (12%) Frame = +1 Query: 1 SASESDGTYNNS----LDNIEYDAFSGNSDQVR------LQKENSSSASKDKKMSVEYLE 150 ++ ++DG +S D++ D GN D + N+S+ K +K+++E+LE Sbjct: 394 TSGDADGVSISSDASDTDSVSSDDVDGNQDDCDDRDINVMHSGNTSNHKKRRKLTIEFLE 453 Query: 151 DECDLFQDVDDLDVSCGEF 207 ++ D+FQ DDLDV+CGEF Sbjct: 454 NDVDVFQSADDLDVTCGEF 472