BLASTX nr result

ID: Panax21_contig00026296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026296
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272498.1| PREDICTED: biotin/lipoate A/B protein ligase...   323   3e-86
ref|XP_002302455.1| predicted protein [Populus trichocarpa] gi|2...   312   7e-83
ref|NP_567866.1| Plastidial lipoyltransferase 2 [Arabidopsis tha...   309   6e-82
ref|XP_002869348.1| lipoyltransferase [Arabidopsis lyrata subsp....   307   3e-81
ref|XP_003551892.1| PREDICTED: plastidial lipoyltransferase 2-li...   299   8e-79

>ref|XP_002272498.1| PREDICTED: biotin/lipoate A/B protein ligase family-like [Vitis
           vinifera] gi|296086674|emb|CBI32309.3| unnamed protein
           product [Vitis vinifera]
          Length = 290

 Score =  323 bits (829), Expect = 3e-86
 Identities = 171/277 (61%), Positives = 208/277 (75%), Gaps = 12/277 (4%)
 Frame = +2

Query: 200 MIAVTNPIFGSIPMYPTGNSSRRAHPSNRFSYFNTRQA----ILITPNGKRRCDLFDMHN 367
           MI  T   FGSI      +S+R   P          QA    I +T   KR C+ FD++N
Sbjct: 1   MILSTTHSFGSI--LTPSHSTRPYTPHLNAVLSKLSQASQFSISVTYKEKRLCECFDLYN 58

Query: 368 ELIPYAEAWSWQKSIVEERKLLSDKDEDFSDTLIILQHPPVYTLGTASSEDHLK-----D 532
           EL+PY EAWSWQKSIV+E+K L  ++++ SD LIILQHPPV+TLGT SSE+++       
Sbjct: 59  ELVPYGEAWSWQKSIVKEKKALIQRNQNCSDALIILQHPPVFTLGTGSSEEYMNFEIIDA 118

Query: 533 VKDFYRTERGGEVTYHGPGQLVIYPILNLRYHNMDLHWYLRALEEVIIRVLSSTFSIKAS 712
             D YRTERGGEVTYHGPGQLV+YPI+NLR H MDLHWYLRALEEV+IRVLS+TFSIKAS
Sbjct: 119 PYDVYRTERGGEVTYHGPGQLVMYPIINLRNHKMDLHWYLRALEEVVIRVLSTTFSIKAS 178

Query: 713 RLKGLTGVWVGDQKVAAIGIRASKWITYHGIAVNVTADLTPFQRIVPCGIQDRRVGSIKG 892
           RL+G TGVWVGDQK+AAIGIR S+WI YHG+A+NVT DLTPFQ IVPCGI++R++GSIKG
Sbjct: 179 RLEGFTGVWVGDQKLAAIGIRVSQWIAYHGLALNVTTDLTPFQLIVPCGIRNRKIGSIKG 238

Query: 893 LLQEEPLSSNECG--ELPYA-DHQLVNITYKSLVKEF 994
           +L E   SSN CG  ++ Y  D QL++IT+KSL+KEF
Sbjct: 239 ILGEFG-SSNRCGASDINYIDDFQLIDITHKSLIKEF 274


>ref|XP_002302455.1| predicted protein [Populus trichocarpa] gi|222844181|gb|EEE81728.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  312 bits (800), Expect = 7e-83
 Identities = 158/271 (58%), Positives = 201/271 (74%), Gaps = 8/271 (2%)
 Frame = +2

Query: 206 AVTNPIFGSIPMYPTG---NSSRRAHPSNRFSYFNTRQAILITPNGKRRCDLFDMHNELI 376
           A T   FGS P+ PT    + SR+  P N  S    ++   +T  G + C+ FD+H EL+
Sbjct: 5   ATTTSNFGSFPICPTTRHHSQSRKIIPLNLVSSQKGQEFTSVTHKGDKMCECFDLHKELV 64

Query: 377 PYAEAWSWQKSIVEERKLLSDKDEDFSDTLIILQHPPVYTLGTASSEDHLK-DVK----D 541
           PY +AW+WQK IV E+  L +++E+  DTLI+LQH PVYT+GT SS ++L  D+K    +
Sbjct: 65  PYGDAWNWQKVIVREKSWLIERNEECPDTLIVLQHQPVYTMGTGSSIEYLNFDIKNAPFE 124

Query: 542 FYRTERGGEVTYHGPGQLVIYPILNLRYHNMDLHWYLRALEEVIIRVLSSTFSIKASRLK 721
            YRTERGGEVTYHGPGQL +YPI+NLR H MDLHWYLR LEEV+IRVLSSTFSIKASR++
Sbjct: 125 VYRTERGGEVTYHGPGQLTMYPIINLRNHKMDLHWYLRELEEVVIRVLSSTFSIKASRIE 184

Query: 722 GLTGVWVGDQKVAAIGIRASKWITYHGIAVNVTADLTPFQRIVPCGIQDRRVGSIKGLLQ 901
           GLTGVWVGDQK+AAIGI+ S+WI YHG+A+NVT DL PF  IVPCGI++R+VGSIKGLL 
Sbjct: 185 GLTGVWVGDQKLAAIGIKVSQWIAYHGLALNVTTDLAPFNLIVPCGIRNRKVGSIKGLL- 243

Query: 902 EEPLSSNECGELPYADHQLVNITYKSLVKEF 994
           EE  S+ +     Y   QL++IT +SL++EF
Sbjct: 244 EESCSNAKAHHFDYT--QLIDITSQSLIREF 272


>ref|NP_567866.1| Plastidial lipoyltransferase 2 [Arabidopsis thaliana]
           gi|75164691|sp|Q948J9.1|LIP2P_ARATH RecName:
           Full=Plastidial lipoyltransferase 2; AltName:
           Full=Lipoate-protein ligase 2p; AltName:
           Full=Lipoyl-[acyl-carrier-protein]-protein-N-
           lipoyltransferase 2p gi|15887052|dbj|BAB69449.1|
           lipoyltransferase [Arabidopsis thaliana]
           gi|62320326|dbj|BAD94675.1| putative protein
           [Arabidopsis thaliana] gi|90186250|gb|ABD91501.1|
           At4g31050 [Arabidopsis thaliana]
           gi|332660451|gb|AEE85851.1| Plastidial lipoyltransferase
           2 [Arabidopsis thaliana]
          Length = 278

 Score =  309 bits (792), Expect = 6e-82
 Identities = 152/224 (67%), Positives = 189/224 (84%), Gaps = 5/224 (2%)
 Frame = +2

Query: 338 RRCDLFDMHNELIPYAEAWSWQKSIVEERKLLSDKDEDFSDTLIILQHPPVYTLGTASSE 517
           R+C  FD++++L+PY +AWSWQKSIVEE+K L D+++D +DT+I+LQH PVYT+GTAS+E
Sbjct: 43  RKCLCFDLYDKLVPYKKAWSWQKSIVEEKKTLIDRNQDCADTVILLQHSPVYTMGTASTE 102

Query: 518 DHLK-DVKD----FYRTERGGEVTYHGPGQLVIYPILNLRYHNMDLHWYLRALEEVIIRV 682
           D+L  D+KD     YRTERGGEVTYHGPGQLV+YPI+NLR H MDLHWYLR LEE++IRV
Sbjct: 103 DYLNFDIKDAPFNVYRTERGGEVTYHGPGQLVMYPIINLRNHEMDLHWYLRMLEEIVIRV 162

Query: 683 LSSTFSIKASRLKGLTGVWVGDQKVAAIGIRASKWITYHGIAVNVTADLTPFQRIVPCGI 862
           LSSTFSIKASRL GLTGVWVG+QKVAAIGIR SKWITYHG+A+NVT DLTPF  IVPCGI
Sbjct: 163 LSSTFSIKASRLDGLTGVWVGNQKVAAIGIRVSKWITYHGLALNVTTDLTPFNWIVPCGI 222

Query: 863 QDRRVGSIKGLLQEEPLSSNECGELPYADHQLVNITYKSLVKEF 994
           +DR+VG+IKGLL++      E G +   D +L++I ++SL+KEF
Sbjct: 223 RDRKVGNIKGLLED-----GEHGMVD--DLRLIDIVHESLLKEF 259


>ref|XP_002869348.1| lipoyltransferase [Arabidopsis lyrata subsp. lyrata]
           gi|297315184|gb|EFH45607.1| lipoyltransferase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 288

 Score =  307 bits (786), Expect = 3e-81
 Identities = 150/224 (66%), Positives = 185/224 (82%), Gaps = 5/224 (2%)
 Frame = +2

Query: 338 RRCDLFDMHNELIPYAEAWSWQKSIVEERKLLSDKDEDFSDTLIILQHPPVYTLGTASSE 517
           R+C  FD++++L+PY  AWSWQKSIVEE+K L D+++D  DT+I+LQH PVYT+GTAS+E
Sbjct: 43  RKCQCFDLYDQLVPYKNAWSWQKSIVEEKKTLIDRNQDCPDTVILLQHSPVYTMGTASTE 102

Query: 518 DHLK-DVKD----FYRTERGGEVTYHGPGQLVIYPILNLRYHNMDLHWYLRALEEVIIRV 682
           D+L  D+KD     YRTERGGEVTYHGPGQLV+YPI+NLR H MDLHWYLR LEE++IRV
Sbjct: 103 DYLNFDIKDAPFDVYRTERGGEVTYHGPGQLVMYPIINLRNHEMDLHWYLRMLEEIVIRV 162

Query: 683 LSSTFSIKASRLKGLTGVWVGDQKVAAIGIRASKWITYHGIAVNVTADLTPFQRIVPCGI 862
           LSS+FSIKASRL  LTGVWVG QKVAAIGIR SKWITYHG+A+NVT DLTPF  IVPCGI
Sbjct: 163 LSSSFSIKASRLDSLTGVWVGSQKVAAIGIRVSKWITYHGLALNVTTDLTPFNWIVPCGI 222

Query: 863 QDRRVGSIKGLLQEEPLSSNECGELPYADHQLVNITYKSLVKEF 994
           +DR+VGSIKGLL++      E G++   D  L+++ ++SL+KEF
Sbjct: 223 KDRKVGSIKGLLED-----GEHGKVD--DLTLIHVAHESLLKEF 259


>ref|XP_003551892.1| PREDICTED: plastidial lipoyltransferase 2-like [Glycine max]
          Length = 306

 Score =  299 bits (765), Expect = 8e-79
 Identities = 160/283 (56%), Positives = 199/283 (70%), Gaps = 18/283 (6%)
 Frame = +2

Query: 200 MIAVTNPIFGSIPMYPTGNSSRRAHPSNRFSYFNTRQAILITP---------NGKRR-CD 349
           MI +    F ++P   +  SS    P     YF   + +L +          NG RR CD
Sbjct: 1   MILLGTSCFSTLPSTASAYSSLPLGP-----YFKQHKPLLYSKPSKFNSLVINGHRRICD 55

Query: 350 LFDMHNELIPYAEAWSWQKSIVEERKLLSDKDEDFSDTLIILQHPPVYTLGTASSEDHLK 529
           LFD+H E +PY  AW WQK IV E+K   +K+ D +DTLIILQHP VYTLGTAS+E +LK
Sbjct: 56  LFDLHQEQVPYEVAWFWQKEIVREKKAQIEKEGDCTDTLIILQHPSVYTLGTASTEGNLK 115

Query: 530 -DVKD----FYRTERGGEVTYHGPGQLVIYPILNLRYHNMDLHWYLRALEEVIIRVLSST 694
            D+K+     YRTERGGEVTYHGPGQLV+YPI+NLR H MDLHWYLR LEEV+IRVLSS 
Sbjct: 116 FDMKNAPFNIYRTERGGEVTYHGPGQLVMYPIINLRRHKMDLHWYLRTLEEVVIRVLSSA 175

Query: 695 FSIKASRLKGLTGVWVGDQKVAAIGIRASKWITYHGIAVNVTADLTPFQRIVPCGIQDRR 874
           FSI+ASRL+GLTGVWVG++K+AA+GIR S WITYHG+A+NVT DL+PF+ IVPCGI DR+
Sbjct: 176 FSIQASRLEGLTGVWVGNEKLAAVGIRVSHWITYHGLALNVTTDLSPFKWIVPCGIHDRQ 235

Query: 875 VGSIKGLLQEEPLSSNECGEL---PYADHQLVNITYKSLVKEF 994
           VGSIKGL++E      + G        D  L++ T+KSL++EF
Sbjct: 236 VGSIKGLVREGKQCIIDHGTTDLHQLDDASLIHTTHKSLIEEF 278


Top