BLASTX nr result

ID: Panax21_contig00026263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026263
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex su...   145   3e-33
ref|XP_002531955.1| conserved hypothetical protein [Ricinus comm...   119   2e-25
ref|XP_002325199.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_003542639.1| PREDICTED: CCR4-NOT transcription complex su...   115   4e-24
emb|CBI28248.3| unnamed protein product [Vitis vinifera]              114   8e-24

>ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Vitis
           vinifera]
          Length = 857

 Score =  145 bits (367), Expect = 3e-33
 Identities = 80/156 (51%), Positives = 97/156 (62%), Gaps = 4/156 (2%)
 Frame = -1

Query: 462 AVTWFHLLEYSNSFSILELLYQNIAPINEEIALRICLLLLDVALLSHQAPRSADVINYVE 283
           A+ WFHL EY  + S+LE LYQNI PI+E  AL ICLLLLDVAL SH   R A++INY+E
Sbjct: 152 AIVWFHLHEYGKALSVLESLYQNIEPIDETTALHICLLLLDVALASHDVSRCAEIINYLE 211

Query: 282 KISCVSTLICQGDNGSSTQQQSSNLVTKSSG-PNNIPIPDVSSSDPAA---NXXXXXXXX 115
           K  CV     QGDN S+ QQQSSNLV KSS  P+N  +PD S+SD  A   +        
Sbjct: 212 KAFCVGYTASQGDNVSTAQQQSSNLVVKSSSIPSNSTVPDASNSDSVASLNSSENPLSRT 271

Query: 114 XXXXXXEYENFFTTLDISGQNLPRPSVVDSSNNFPR 7
                 +YE  F+ LDI GQNL RP+ + S N+  R
Sbjct: 272 LSEETLDYETMFSALDIGGQNLTRPAGLPSLNDLSR 307


>ref|XP_002531955.1| conserved hypothetical protein [Ricinus communis]
           gi|223528401|gb|EEF30437.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 851

 Score =  119 bits (299), Expect = 2e-25
 Identities = 77/160 (48%), Positives = 98/160 (61%), Gaps = 6/160 (3%)
 Frame = -1

Query: 462 AVTWFHLLEYSNSFSILELLYQNIAPINEEIALRICLLLLDVALLSHQAPRSADVINYVE 283
           A+ WFHL EY+ + S+LE LY NI PI+E  AL +CLLLLDVAL    A +SADV+ Y+E
Sbjct: 172 AIIWFHLHEYTKALSVLEPLYHNIEPIDETTALHVCLLLLDVALACQDASKSADVLIYLE 231

Query: 282 KISCVSTLICQGDNGSSTQQQSSNLVTKS-SGPNNIPIPDVSSSDPAAN-----XXXXXX 121
           K   V   + QGD GS+ QQQS+NLV KS S P++  + D SSSD A +           
Sbjct: 232 KAFGVGG-VGQGD-GSTAQQQSANLVAKSTSVPSSSSVVDASSSDLATSGNGLENSLSRT 289

Query: 120 XXXXXXXXEYENFFTTLDISGQNLPRPSVVDSSNNFPRTQ 1
                   EYE  F +L+ISGQNL RPS + S+N+  R Q
Sbjct: 290 LSLSEETLEYETMF-SLEISGQNLTRPSALSSANDLSRAQ 328


>ref|XP_002325199.1| predicted protein [Populus trichocarpa] gi|222866633|gb|EEF03764.1|
           predicted protein [Populus trichocarpa]
          Length = 841

 Score =  118 bits (295), Expect = 6e-25
 Identities = 76/156 (48%), Positives = 96/156 (61%), Gaps = 3/156 (1%)
 Frame = -1

Query: 462 AVTWFHLLEYSNSFSILELLYQNIAPINEEIALRICLLLLDVALLSHQAPRSADVINYVE 283
           A+ W+HL EYS + S+LE LY NI PI E  AL +CLLLLDVAL    A +SADV+ Y+E
Sbjct: 163 AIIWYHLHEYSKALSVLEPLYHNIEPIEERTALHVCLLLLDVALACQDASKSADVLLYLE 222

Query: 282 KISCVSTLICQGDNGSSTQQQSSNLVTKS-SGPNNIPIPDVSSS-DPAAN-XXXXXXXXX 112
           K     + + QGDNGS+ QQQS+NLV KS S P++    D +S   P+ N          
Sbjct: 223 KAFGFGS-VGQGDNGSAAQQQSTNLVAKSFSVPSSSSGMDANSDLAPSENALENSLSRTL 281

Query: 111 XXXXXEYENFFTTLDISGQNLPRPSVVDSSNNFPRT 4
                EYE+ F +LDISGQNL RP  + SSN+  RT
Sbjct: 282 SDETLEYESMF-SLDISGQNLARPVGLSSSNDLSRT 316


>ref|XP_003542639.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Glycine
           max]
          Length = 859

 Score =  115 bits (288), Expect = 4e-24
 Identities = 72/156 (46%), Positives = 98/156 (62%), Gaps = 4/156 (2%)
 Frame = -1

Query: 462 AVTWFHLLEYSNSFSILELLYQNIAPINEEIALRICLLLLDVALLSHQAPRSADVINYVE 283
           A+ WFHL +Y+ + S+LE L+QNI PI+E  AL ICLLLLD +L  H A +SADV+ Y+E
Sbjct: 160 AIIWFHLHDYAKTLSVLEPLFQNIEPIDETTALHICLLLLDASLACHDASKSADVLTYLE 219

Query: 282 KISCVSTLICQGDNGSSTQQQSSNLVTKS-SGPNNIPIPDVSSSD--PAAN-XXXXXXXX 115
           K   VS+ + QGD+G++ QQQ++NL+TKS    +N+   D SSSD  P+AN         
Sbjct: 220 KAFGVSS-VSQGDSGNTAQQQAANLITKSVPVASNVSAADASSSDLGPSANVSENHLSRD 278

Query: 114 XXXXXXEYENFFTTLDISGQNLPRPSVVDSSNNFPR 7
                 +YE     LD+ GQNL RP +  SSN+  R
Sbjct: 279 LSEDTLDYEAMI--LDMGGQNLARP-MGPSSNDLSR 311


>emb|CBI28248.3| unnamed protein product [Vitis vinifera]
          Length = 812

 Score =  114 bits (285), Expect = 8e-24
 Identities = 66/155 (42%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
 Frame = -1

Query: 462 AVTWFHLLEYSNSFSILELLYQNIAPINEEIALRICLLLLDVALLSHQAPRSADVINYVE 283
           A+ WFHL EY  + S+LE LYQNI PI+E  AL ICLLLLDVAL SH   R A++INY+E
Sbjct: 152 AIVWFHLHEYGKALSVLESLYQNIEPIDETTALHICLLLLDVALASHDVSRCAEIINYLE 211

Query: 282 KISCVSTLICQGDNGSSTQQQSSNLVTKSSGPNNIPIPDVSSSDPAA---NXXXXXXXXX 112
           K  CV                    +  SS P+N  +PD S+SD  A   +         
Sbjct: 212 KAFCV----------------GYTAIKSSSIPSNSTVPDASNSDSVASLNSSENPLSRTL 255

Query: 111 XXXXXEYENFFTTLDISGQNLPRPSVVDSSNNFPR 7
                +YE  F+ LDI GQNL RP+ + S N+  R
Sbjct: 256 SEETLDYETMFSALDIGGQNLTRPAGLPSLNDLSR 290


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