BLASTX nr result
ID: Panax21_contig00026176
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00026176
(1780 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517927.1| pentatricopeptide repeat-containing protein,... 526 e-147
ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containi... 523 e-146
ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containi... 519 e-144
emb|CBI21839.3| unnamed protein product [Vitis vinifera] 506 e-141
emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera] 481 e-133
>ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542909|gb|EEF44445.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 507
Score = 526 bits (1354), Expect = e-147
Identities = 268/503 (53%), Positives = 355/503 (70%)
Frame = -2
Query: 1776 EVEMTRQIISDWMKMGGFSKLWSVSPLSTQSQALTSASYSGEIERSLWNRVRAQKDPRVS 1597
++ + +IIS W F +S ST+SQ +S+S L++R++ +DP+ S
Sbjct: 9 KLHFSPKIISRWNPNPQF--YFSSLFFSTRSQTQSSSSSESS---KLYDRIQIVRDPKES 63
Query: 1596 VIPILEQWVGEGEPVDKPQLQFLIREIKGFKRFHQALEISKWMTDRRYFSLSPSDVAIEL 1417
+IP+L QWV EG V K LQ L+ +KG+KRF+ ALE+S WMTD RYFSLSPSDVA+ L
Sbjct: 64 IIPVLNQWVSEGHTVGKALLQSLVHLMKGYKRFNHALEMSHWMTDCRYFSLSPSDVAVRL 123
Query: 1416 ELISRVHGLKHAETYFNSISTKLKSANSYGALLNVYVREKCVAKAEATIQKMKEMGCATT 1237
ELI RV+G HAE YF IS KLKS N YGALL+ YVRE V KAEA +Q+M+E G AT+
Sbjct: 124 ELIYRVYGSAHAEMYFEKISDKLKSGNVYGALLSGYVRENSVQKAEAVLQEMREKGIATS 183
Query: 1236 SFPYNMLINLYSQIGEHKKIDLVMQEIDALGIPHDKFTLRNLMNAYVQASDILRMEKILQ 1057
SFPYN++INLY+Q G +KID++ +E++ GIP DK+T+RNLM AYV ASDI ME+IL
Sbjct: 184 SFPYNIMINLYAQNGAFEKIDILKEEMERNGIPQDKYTMRNLMAAYVAASDISGMERILN 243
Query: 1056 QVENDLDYLIDWKLYSLAANGYLKVGSTEKALSMLKKMEEKLPTGKIDKALEHLITLYAK 877
Q+E W+ YS+AA+GYLKVG EKAL ML+KMEE +P GK A +L+TLYAK
Sbjct: 244 QLETHPQLGHGWQAYSVAASGYLKVGLIEKALKMLRKMEETMPIGKKTSAFNYLLTLYAK 303
Query: 876 TGNKSEVYRVWELFSPSTEVSSALYSTMITSLAKMDDVEGAQKIFQEWESRCINYDFRVL 697
TG K E+YRVW + P EV + MI+SL K+DD+EGA++IF+EWES+C+ YDFRVL
Sbjct: 304 TGRKDELYRVWNSYKPLAEVKETQFCCMISSLEKVDDIEGAERIFEEWESQCMMYDFRVL 363
Query: 696 NQLLGAYGKKGLLDRAVTVVKTASEGRAPYASTWNILAEGYMEHKQMEKAVQMFKKALSV 517
N+LL AY +KGL +A K A+EGR PYASTW +A Y+ QM KAV+M KKA+SV
Sbjct: 364 NKLLLAYCRKGLYTKAEAAFKKAAEGRTPYASTWITMAMSYIGQNQMSKAVEMLKKAISV 423
Query: 516 GRHGWKPSSVILDACLEYLEGQGDTAGMEEMIVLLKISGSVSQNIYHRLLRTYISTGKSV 337
R GWKP+ + L CL+YLE QGD G+EE++ LK + S++++IYHRL+RTY + G V
Sbjct: 424 SRKGWKPNPITLTTCLDYLEEQGDVEGIEEIVKSLKSTESLTRDIYHRLVRTYTAAGIPV 483
Query: 336 SGILQQMKIDGFTVNEETQRILE 268
+ ++ +MK+D +EET +ILE
Sbjct: 484 TKVIDKMKMDNIAADEETHKILE 506
>ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
gi|449479168|ref|XP_004155524.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 500
Score = 523 bits (1348), Expect = e-146
Identities = 259/453 (57%), Positives = 340/453 (75%), Gaps = 1/453 (0%)
Frame = -2
Query: 1608 PRVSVIPILEQWVGEGEPVDKPQLQFLIREIKGFKRFHQALEISKWMTDRRYFSLSPSDV 1429
P++SV+P+LE+WVG+G + KP+LQ+L+ +K +RF+ ALEIS+WMTDRRY SLSPSD
Sbjct: 48 PKISVVPVLEKWVGDGRAIGKPELQYLVHLMKDSRRFNHALEISQWMTDRRYLSLSPSDA 107
Query: 1428 AIELELISRVHGLKHAETYFNSISTKLKSANSYGALLNVYVREKCVAKAEATIQKMKEMG 1249
A+ L+LI VHGL+HAE YFNSIS +LK++N YGALL YVREK + KAEA +Q+M++MG
Sbjct: 108 AVRLDLIHSVHGLEHAENYFNSISIRLKTSNVYGALLGCYVREKSLEKAEAIMQEMRKMG 167
Query: 1248 CATTSFPYNMLINLYSQIGEHKKIDLVMQEIDALGIPHDKFTLRNLMNAYVQASDILRME 1069
ATTSF YN+LINLY+QIG+H KIDL+++E+ GIP D +++RNL AYV +DI ME
Sbjct: 168 IATTSFAYNVLINLYAQIGQHDKIDLLIEEMKTKGIPQDIYSIRNLCAAYVAKADISGME 227
Query: 1068 KILQQVENDLDYLIDWKLYSLAANGYLKVGSTEKALSMLKKMEEKLPTGKIDKALEHLIT 889
KIL+++E D + DW +YS+AANGYL G +ALSMLKK EEK+ A + L++
Sbjct: 228 KILKRIEEDSELKADWTIYSIAANGYLTAGLETEALSMLKKTEEKVRPNTNKFAFKFLLS 287
Query: 888 LYAKTGNKSEVYRVWELFSPSTEVSSALYSTMITSLAKMDDVEGAQKIFQEWESRCINYD 709
LY +TG+K+EVYRVW F P T+ + Y+ MITSLAK+DD+EGA++IFQEWES+C YD
Sbjct: 288 LYERTGHKNEVYRVWNTFKPLTKETCVPYALMITSLAKLDDIEGAERIFQEWESKCTVYD 347
Query: 708 FRVLNQLLGAYGKKGLLDRAVTVVKTASEGRAPYASTWNILAEGYMEHKQMEKAVQMFKK 529
FRVLN+LL AY +KGLLD+A +VV A R P+ STW+ILA GY E+ M KAV+M KK
Sbjct: 348 FRVLNRLLVAYCRKGLLDKAESVVNQAVVERTPFRSTWSILATGYAEYGHMSKAVEMLKK 407
Query: 528 ALSVGRHGWKP-SSVILDACLEYLEGQGDTAGMEEMIVLLKISGSVSQNIYHRLLRTYIS 352
A+ VGR WKP IL+ACL+YLE QGD M+E++ L K SG+V + +Y+RLLRT I+
Sbjct: 408 AILVGRQNWKPKQGDILEACLDYLEKQGDAETMDEIVRLCKSSGTVMKEMYYRLLRTSIA 467
Query: 351 TGKSVSGILQQMKIDGFTVNEETQRILEKKPKL 253
GK V IL+QMK+DGF +EE +IL K L
Sbjct: 468 GGKPVISILEQMKMDGFAADEEVDKILGSKTNL 500
>ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 461
Score = 519 bits (1336), Expect = e-144
Identities = 261/438 (59%), Positives = 332/438 (75%)
Frame = -2
Query: 1641 SLWNRVRAQKDPRVSVIPILEQWVGEGEPVDKPQLQFLIREIKGFKRFHQALEISKWMTD 1462
SL++R++A +DP+ S+ P+L QW+ EG+ V KPQLQ L+R +K F+RFH ALEIS+WMTD
Sbjct: 23 SLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTD 82
Query: 1461 RRYFSLSPSDVAIELELISRVHGLKHAETYFNSISTKLKSANSYGALLNVYVREKCVAKA 1282
RRYF+L+PSD AI L+LIS VHG AE+YFN+I LK++++YGALL+ YVREK V KA
Sbjct: 83 RRYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEKA 142
Query: 1281 EATIQKMKEMGCATTSFPYNMLINLYSQIGEHKKIDLVMQEIDALGIPHDKFTLRNLMNA 1102
EAT+QKM+EM AT+SFPYNMLINLYSQ G H KI+ ++QE+ + IP D FT+RNLM A
Sbjct: 143 EATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVA 202
Query: 1101 YVQASDILRMEKILQQVENDLDYLIDWKLYSLAANGYLKVGSTEKALSMLKKMEEKLPTG 922
YV ASDI MEK L ++E D +DW +YS+AA+GYLKVG +KAL MLKK+E P
Sbjct: 203 YVAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHL 262
Query: 921 KIDKALEHLITLYAKTGNKSEVYRVWELFSPSTEVSSALYSTMITSLAKMDDVEGAQKIF 742
+ A + L++LYA+TG+K E+YRVW L+ PS E A YS MIT L K+DD+EGA+KIF
Sbjct: 263 ERLSAFKFLLSLYARTGHKQELYRVWNLYKPSYEYPEA-YSCMITCLTKLDDIEGAEKIF 321
Query: 741 QEWESRCINYDFRVLNQLLGAYGKKGLLDRAVTVVKTASEGRAPYASTWNILAEGYMEHK 562
QEWE C YDFRVLN+LL AY K+ L D+A ++V E R PYASTWNILA+GY+E K
Sbjct: 322 QEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEERMPYASTWNILAKGYVEDK 381
Query: 561 QMEKAVQMFKKALSVGRHGWKPSSVILDACLEYLEGQGDTAGMEEMIVLLKISGSVSQNI 382
QM KAV+M KKA+SVGR GW+P+S+ILDAC+EYLEGQG+ +EE+ L K G +I
Sbjct: 382 QMPKAVEMLKKAISVGRKGWRPNSIILDACIEYLEGQGNLEEIEEIARLCKNLGIPDGDI 441
Query: 381 YHRLLRTYISTGKSVSGI 328
+HRLLRT + KSVS I
Sbjct: 442 HHRLLRTSAAGEKSVSAI 459
>emb|CBI21839.3| unnamed protein product [Vitis vinifera]
Length = 501
Score = 506 bits (1303), Expect = e-141
Identities = 252/423 (59%), Positives = 322/423 (76%)
Frame = -2
Query: 1641 SLWNRVRAQKDPRVSVIPILEQWVGEGEPVDKPQLQFLIREIKGFKRFHQALEISKWMTD 1462
SL++R++A +DP+ S+ P+L QW+ EG+ V KPQLQ L+R +K F+RFH ALEIS+WMTD
Sbjct: 23 SLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTD 82
Query: 1461 RRYFSLSPSDVAIELELISRVHGLKHAETYFNSISTKLKSANSYGALLNVYVREKCVAKA 1282
RRYF+L+PSD AI L+LIS VHG AE+YFN+I LK++++YGALL+ YVREK V KA
Sbjct: 83 RRYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEKA 142
Query: 1281 EATIQKMKEMGCATTSFPYNMLINLYSQIGEHKKIDLVMQEIDALGIPHDKFTLRNLMNA 1102
EAT+QKM+EM AT+SFPYNMLINLYSQ G H KI+ ++QE+ + IP D FT+RNLM A
Sbjct: 143 EATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVA 202
Query: 1101 YVQASDILRMEKILQQVENDLDYLIDWKLYSLAANGYLKVGSTEKALSMLKKMEEKLPTG 922
YV ASDI MEK L ++E D +DW +YS+AA+GYLKVG +KAL MLKK+E P
Sbjct: 203 YVAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHL 262
Query: 921 KIDKALEHLITLYAKTGNKSEVYRVWELFSPSTEVSSALYSTMITSLAKMDDVEGAQKIF 742
+ A + L++LYA+TG+K E+YRVW L+ PS E A YS MIT L K+DD+EGA+KIF
Sbjct: 263 ERLSAFKFLLSLYARTGHKQELYRVWNLYKPSYEYPEA-YSCMITCLTKLDDIEGAEKIF 321
Query: 741 QEWESRCINYDFRVLNQLLGAYGKKGLLDRAVTVVKTASEGRAPYASTWNILAEGYMEHK 562
QEWE C YDFRVLN+LL AY K+ L D+A ++V E R PYASTWNILA+GY+E K
Sbjct: 322 QEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEERMPYASTWNILAKGYVEDK 381
Query: 561 QMEKAVQMFKKALSVGRHGWKPSSVILDACLEYLEGQGDTAGMEEMIVLLKISGSVSQNI 382
QM KAV+M KKA+SVGR GW+P+S+ILDAC+EYLEGQG+ +EE+ L K G +I
Sbjct: 382 QMPKAVEMLKKAISVGRKGWRPNSIILDACIEYLEGQGNLEEIEEIARLCKNLGIPDGDI 441
Query: 381 YHR 373
+HR
Sbjct: 442 HHR 444
>emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]
Length = 448
Score = 481 bits (1238), Expect = e-133
Identities = 249/438 (56%), Positives = 315/438 (71%)
Frame = -2
Query: 1641 SLWNRVRAQKDPRVSVIPILEQWVGEGEPVDKPQLQFLIREIKGFKRFHQALEISKWMTD 1462
SL++R++A +DP+ S+ P+L QW+ EG+ V KPQLQ L+R +K F+RFH ALEIS+WMTD
Sbjct: 23 SLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTD 82
Query: 1461 RRYFSLSPSDVAIELELISRVHGLKHAETYFNSISTKLKSANSYGALLNVYVREKCVAKA 1282
RRYF+L+PSD AI L+LIS V ++YGALL+ YVREK V KA
Sbjct: 83 RRYFTLTPSDAAIRLDLISMV-------------PWTXAGXDAYGALLSGYVREKSVEKA 129
Query: 1281 EATIQKMKEMGCATTSFPYNMLINLYSQIGEHKKIDLVMQEIDALGIPHDKFTLRNLMNA 1102
EAT+QKM+EM AT+SFPYNMLINLYSQ G H KI+ ++QE+ IP D FT+ NLM A
Sbjct: 130 EATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQXKAIPCDAFTVXNLMVA 189
Query: 1101 YVQASDILRMEKILQQVENDLDYLIDWKLYSLAANGYLKVGSTEKALSMLKKMEEKLPTG 922
YV ASDI MEK L ++E D +DW +YS+AA+GYLKVG +KAL MLKK+E P
Sbjct: 190 YVAASDISAMEKXLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHL 249
Query: 921 KIDKALEHLITLYAKTGNKSEVYRVWELFSPSTEVSSALYSTMITSLAKMDDVEGAQKIF 742
+ A + L++LYA+T +K E+YRVW L+ PS E A YS MIT L K+DD+EGA+KIF
Sbjct: 250 ERXSAFKXLLSLYARTXHKQELYRVWNLYKPSYEYPEA-YSCMITCLTKLDDIEGAEKIF 308
Query: 741 QEWESRCINYDFRVLNQLLGAYGKKGLLDRAVTVVKTASEGRAPYASTWNILAEGYMEHK 562
QEWE C YDFRVLN+LL AY K+ L D+A ++V E R PYASTWNILA+GY+E K
Sbjct: 309 QEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEERMPYASTWNILAKGYVEDK 368
Query: 561 QMEKAVQMFKKALSVGRHGWKPSSVILDACLEYLEGQGDTAGMEEMIVLLKISGSVSQNI 382
QM KAV+M KKA+SVGR GW+P+S+ILDAC+EYLEGQG+ +EE+ L K G +I
Sbjct: 369 QMPKAVEMLKKAISVGRKGWRPNSIILDACIEYLEGQGNLEEIEEIARLCKNLGIPDGDI 428
Query: 381 YHRLLRTYISTGKSVSGI 328
+HRLLRT + KSVS I
Sbjct: 429 HHRLLRTSAAGEKSVSAI 446