BLASTX nr result

ID: Panax21_contig00026175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026175
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316327.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002316325.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002525074.1| hypothetical protein RCOM_0745050 [Ricinus c...    57   1e-06
ref|XP_003535782.1| PREDICTED: uncharacterized protein LOC100817...    54   1e-05

>ref|XP_002316327.1| predicted protein [Populus trichocarpa] gi|222865367|gb|EEF02498.1|
           predicted protein [Populus trichocarpa]
          Length = 713

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
 Frame = -2

Query: 332 CSV-LLMGGDAPNQFEHSTNREEVNIDTNTTQGTCTTVDQVVADLNVASRGHESKESNAS 156
           CS  L + G+A    EH+T  E V +     +  C +  QV +++     GH   E NAS
Sbjct: 502 CSTGLSISGNASECLEHTTCAEGVLLRKEIVKEACESAGQVSSEMVCIPVGHSGNELNAS 561

Query: 155 ---EGMIHSGDSEDA-----MNYVPLDSLR---NSEGSESDEEKMNISADILEGDSYGSD 9
              +  I  G + D      +N+    S R   N EGS +DEEK+N+S D+LE D+YGS 
Sbjct: 562 VMIDTAITEGRNVDIPEQCELNFTEEVSARSHGNGEGSVTDEEKINLSGDMLEEDTYGSG 621

Query: 8   YE 3
           YE
Sbjct: 622 YE 623


>ref|XP_002316325.1| predicted protein [Populus trichocarpa] gi|222865365|gb|EEF02496.1|
           predicted protein [Populus trichocarpa]
          Length = 1317

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
 Frame = -2

Query: 332 CSV-LLMGGDAPNQFEHSTNREEVNIDTNTTQGTCTTVDQVVADLNVASRGHESKESNAS 156
           CS  L + G+A    EH+T  E V +     +  C +  QV +++     GH   E NAS
Sbjct: 502 CSTGLSISGNASECLEHTTCAEGVLLRKEIVKEACESAGQVSSEMVCIPVGHSGNELNAS 561

Query: 155 ---EGMIHSGDSEDA-----MNYVPLDSLR---NSEGSESDEEKMNISADILEGDSYGSD 9
              +  I  G + D      +N+    S R   N EGS +DEEK+N+S D+LE D+YGS 
Sbjct: 562 VMIDTAITEGRNVDIPEQCELNFTEEVSARSHGNGEGSVTDEEKINLSGDMLEEDTYGSG 621

Query: 8   YE 3
           YE
Sbjct: 622 YE 623


>ref|XP_002525074.1| hypothetical protein RCOM_0745050 [Ricinus communis]
           gi|223535655|gb|EEF37321.1| hypothetical protein
           RCOM_0745050 [Ricinus communis]
          Length = 1517

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 14/113 (12%)
 Frame = -2

Query: 299 NQFEHSTNR--EEVNIDTNTTQGTCTTVDQVVADLNVASRGHESKESNASEGMIHSGDSE 126
           N  ++S +R  E V++     + +C + +QV A++  +    +S + N   G + +  SE
Sbjct: 659 NLSDYSGHRGDEGVHLSNEAPEESCESAEQVAAEMG-SLPACQSCDENKCSGTVDAAVSE 717

Query: 125 DAM------------NYVPLDSLRNSEGSESDEEKMNISADILEGDSYGSDYE 3
                          + VP D+ RN +G+ SD+EK+N+S D+LE DSYGS+YE
Sbjct: 718 KKSVDNSDQCKLKFKDAVPPDAHRNGDGTVSDDEKINLSGDMLEEDSYGSEYE 770


>ref|XP_003535782.1| PREDICTED: uncharacterized protein LOC100817471 [Glycine max]
          Length = 1396

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
 Frame = -2

Query: 401 DNVSSALAMALVPSKS--------CPLGLLPCSVLLMGGDAPNQFEHSTNREEVNIDTNT 246
           DN S ++AM ++P  +         P+  +  + L    +  +Q E+S+  E VN++   
Sbjct: 523 DNSSPSMAMPVMPDTTQISAEPACAPVKPMCTAELSTSENTVSQIENSSPTEGVNVE-KV 581

Query: 245 TQGTCTTVDQVV--------ADLNVASRGHESKESNASEGMIHSGDSEDA----MNYVPL 102
             G C   +QV+         D  +       + S+ S    ++ D +      MN  P 
Sbjct: 582 CDGACLNAEQVIIETVAMPMVDNGLVLNNPGLQTSSVSTEEENAADRDACRLKLMNEPPP 641

Query: 101 DSLRNSEGSESDEEKMNISADILEGDSYGSDYE 3
            S  N EG  SDEEK+ +S D+LE DSY SD E
Sbjct: 642 ASRGNGEGCASDEEKITLSTDMLEDDSYDSDSE 674


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