BLASTX nr result
ID: Panax21_contig00026067
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00026067
(1478 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI20464.3| unnamed protein product [Vitis vinifera] 456 e-126
ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-l... 456 e-126
ref|XP_003541035.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-co... 417 e-114
ref|XP_002319259.1| predicted protein [Populus trichocarpa] gi|2... 409 e-111
ref|NP_200263.2| transducin/WD40 domain-containing protein [Arab... 400 e-109
>emb|CBI20464.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 456 bits (1172), Expect = e-126
Identities = 249/457 (54%), Positives = 299/457 (65%), Gaps = 10/457 (2%)
Frame = -1
Query: 1442 MDLLRKAYSTASDEDDDKSGHVERPALPPSKRPKPGNPSTSFKSFPVTRPNYAPNHPIET 1263
MDLL AYST SD+DDD+ V P PP KR KP NP K +P+
Sbjct: 89 MDLLCNAYSTPSDDDDDEPRPVAEPTPPPLKRFKPQNPPLLPKPYPL------------- 135
Query: 1262 PLPGRYISKRERAVLASA-PPTDPNALLIISSPALGNISDSDIQHDILSSLRHQRKGHTL 1086
+ GRYISKRER++L+ A P PN +SP +G+ISDSD+ DILSSLRHQ KG +
Sbjct: 136 -IAGRYISKRERSLLSPALSPPLPNPAAS-ASPVMGSISDSDLPRDILSSLRHQAKGRSQ 193
Query: 1085 FSQLPERLSVSLTGHDKAVNALQWSTTHXXXXXXXXXXXXXXXXXXLLASAGMDHTICIW 906
++ ERLSV L H K+VN +QWS TH LLASAGMDH ICIW
Sbjct: 194 LGRISERLSVDLKSHKKSVNTIQWSPTHAH----------------LLASAGMDHAICIW 237
Query: 905 NVWSRNQKKARVLRNHTAAVKDVKWSELGLSVLSCGYDCTSRLLDIEKGLETHVFKEDQX 726
N WSR+QKKAR H AAVKDVKW + GLSVLSCGYDC+SRL+D+EKGL+T +F EDQ
Sbjct: 238 NAWSRDQKKAREFSYHNAAVKDVKWLQQGLSVLSCGYDCSSRLIDVEKGLQTQIFTEDQV 297
Query: 725 XXXVKFHPNNSNLFLSGGSKGIISLWDIRTEKVVHQYVRGLGPILDVEFTNDTKQFISSS 546
+K HP+NSNLFLSGGSKG + LWDIRT KVVH+Y+RGLGPILD+EFT + KQFISSS
Sbjct: 298 VGVIKLHPDNSNLFLSGGSKGRLRLWDIRTGKVVHEYIRGLGPILDIEFTVNAKQFISSS 357
Query: 545 DVSKGNVTENSIMVWDVSRQVPLSNQVYAEAYTCPCIRCHPFDPYFIAVKWKLHSDLLC* 366
DVS N++ENSI+VWDVSRQVPLSNQVY EAYTCPCIRCHP DP+FIA + +
Sbjct: 358 DVSGSNMSENSIVVWDVSRQVPLSNQVYVEAYTCPCIRCHPSDPFFIAQSNGNYIAIFSS 417
Query: 365 TPI*T*QVQEV*E---------PCCFWVSN*VQFQLRRGETCIWVLRWIYLLVHSKSSEL 213
P + E C F + + + CI+ L +SSEL
Sbjct: 418 CPPFKLDKYKRYENHGVSGFPIKCNFSLDG-EKLASGSSDGCIY-------LYDYRSSEL 469
Query: 212 VKKVKAYEQACVDVVFHPSMPNVIASCSWNGDISVFE 102
V+K+KAYEQAC+DV FHP +PNVIA+C W+G +SVFE
Sbjct: 470 VQKIKAYEQACIDVAFHPLLPNVIAACGWDGAVSVFE 506
>ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-like [Vitis vinifera]
Length = 418
Score = 456 bits (1172), Expect = e-126
Identities = 249/457 (54%), Positives = 299/457 (65%), Gaps = 10/457 (2%)
Frame = -1
Query: 1442 MDLLRKAYSTASDEDDDKSGHVERPALPPSKRPKPGNPSTSFKSFPVTRPNYAPNHPIET 1263
MDLL AYST SD+DDD+ V P PP KR KP NP K +P+
Sbjct: 1 MDLLCNAYSTPSDDDDDEPRPVAEPTPPPLKRFKPQNPPLLPKPYPL------------- 47
Query: 1262 PLPGRYISKRERAVLASA-PPTDPNALLIISSPALGNISDSDIQHDILSSLRHQRKGHTL 1086
+ GRYISKRER++L+ A P PN +SP +G+ISDSD+ DILSSLRHQ KG +
Sbjct: 48 -IAGRYISKRERSLLSPALSPPLPNPAAS-ASPVMGSISDSDLPRDILSSLRHQAKGRSQ 105
Query: 1085 FSQLPERLSVSLTGHDKAVNALQWSTTHXXXXXXXXXXXXXXXXXXLLASAGMDHTICIW 906
++ ERLSV L H K+VN +QWS TH LLASAGMDH ICIW
Sbjct: 106 LGRISERLSVDLKSHKKSVNTIQWSPTHAH----------------LLASAGMDHAICIW 149
Query: 905 NVWSRNQKKARVLRNHTAAVKDVKWSELGLSVLSCGYDCTSRLLDIEKGLETHVFKEDQX 726
N WSR+QKKAR H AAVKDVKW + GLSVLSCGYDC+SRL+D+EKGL+T +F EDQ
Sbjct: 150 NAWSRDQKKAREFSYHNAAVKDVKWLQQGLSVLSCGYDCSSRLIDVEKGLQTQIFTEDQV 209
Query: 725 XXXVKFHPNNSNLFLSGGSKGIISLWDIRTEKVVHQYVRGLGPILDVEFTNDTKQFISSS 546
+K HP+NSNLFLSGGSKG + LWDIRT KVVH+Y+RGLGPILD+EFT + KQFISSS
Sbjct: 210 VGVIKLHPDNSNLFLSGGSKGRLRLWDIRTGKVVHEYIRGLGPILDIEFTVNAKQFISSS 269
Query: 545 DVSKGNVTENSIMVWDVSRQVPLSNQVYAEAYTCPCIRCHPFDPYFIAVKWKLHSDLLC* 366
DVS N++ENSI+VWDVSRQVPLSNQVY EAYTCPCIRCHP DP+FIA + +
Sbjct: 270 DVSGSNMSENSIVVWDVSRQVPLSNQVYVEAYTCPCIRCHPSDPFFIAQSNGNYIAIFSS 329
Query: 365 TPI*T*QVQEV*E---------PCCFWVSN*VQFQLRRGETCIWVLRWIYLLVHSKSSEL 213
P + E C F + + + CI+ L +SSEL
Sbjct: 330 CPPFKLDKYKRYENHGVSGFPIKCNFSLDG-EKLASGSSDGCIY-------LYDYRSSEL 381
Query: 212 VKKVKAYEQACVDVVFHPSMPNVIASCSWNGDISVFE 102
V+K+KAYEQAC+DV FHP +PNVIA+C W+G +SVFE
Sbjct: 382 VQKIKAYEQACIDVAFHPLLPNVIAACGWDGAVSVFE 418
>ref|XP_003541035.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein 25-like
[Glycine max]
Length = 417
Score = 417 bits (1072), Expect = e-114
Identities = 234/457 (51%), Positives = 295/457 (64%), Gaps = 10/457 (2%)
Frame = -1
Query: 1442 MDLLRKAYSTASDEDDDKSGHVERPALPPSKRPKPGNPSTSFKSFPVT-RPNYAPNHPIE 1266
MDLL AYS ASD +D++ E P P +R +P+ + P++ P++ NH +
Sbjct: 1 MDLLCNAYSNASDHEDEE----EEP--PKRQRVSLSSPNPLKRHLPLSSHPSF--NHQTQ 52
Query: 1265 TPLPGRYISKRERAVLASAPPTDPNALLIISSPALGNISDSDIQHDILSSLRHQRKGHTL 1086
P+PGRYISKR+RA++A P L + S +I D+DI H+ILS L+ + KGH
Sbjct: 53 APMPGRYISKRQRALMAPPLP-----LFLTRS---WSILDADIHHNILSLLKSKAKGHQS 104
Query: 1085 FSQLPERLSVSLTGHDKAVNALQWSTTHXXXXXXXXXXXXXXXXXXLLASAGMDHTICIW 906
+ + E+LS SL GH KAVNA+ WS+TH LLASAGMDH +CIW
Sbjct: 105 PNLISEKLSASLYGHTKAVNAIHWSSTHAH----------------LLASAGMDHAVCIW 148
Query: 905 NVWSRNQKKARVLRNHTAAVKDVKWSELGLSVLSCGYDCTSRLLDIEKGLETHVFKEDQX 726
NVW RNQKKA VL H AAVKDVKWS+ G +LSCGYDCTSRL+D+EKGLET VF+EDQ
Sbjct: 149 NVWGRNQKKACVLNFHNAAVKDVKWSQQGHFLLSCGYDCTSRLIDVEKGLETRVFREDQI 208
Query: 725 XXXVKFHPNNSNLFLSGGSKGIISLWDIRTEKVVHQYVRGLGPILDVEFTNDTKQFISSS 546
+KFHP+NSNLFLSGGSKG LWD RT KVVH Y LGPILDVEFT + KQFISSS
Sbjct: 209 VGVIKFHPDNSNLFLSGGSKGRFKLWDARTGKVVHNYNXNLGPILDVEFTMNGKQFISSS 268
Query: 545 DVSKGNVTENSIMVWDVSRQVPLSNQVYAEAYTCPCIRCHPFDPYFIAVKWKLHSDLLC* 366
DVS+ N +N+I+VWDVSR++PLSNQVY EAYTCPC+RCHPFD F+A + +
Sbjct: 269 DVSQSNANKNAIIVWDVSREIPLSNQVYVEAYTCPCVRCHPFDSIFVAQSNGNYDAIFTT 328
Query: 365 TPI*T*QVQEV*E---------PCCFWVSN*VQFQLRRGETCIWVLRWIYLLVHSKSSEL 213
TP + E C F + +L G + + + Y +SS++
Sbjct: 329 TPPYRLNKYKRYEGHVVSGFPIKCNFSLDG---KKLASGSSDGSIYLYDY-----QSSKV 380
Query: 212 VKKVKAYEQACVDVVFHPSMPNVIASCSWNGDISVFE 102
VKK+KA++QAC+DV FHP +PNVIASCSW+G I VFE
Sbjct: 381 VKKIKAHDQACIDVAFHPVIPNVIASCSWDGSILVFE 417
>ref|XP_002319259.1| predicted protein [Populus trichocarpa] gi|222857635|gb|EEE95182.1|
predicted protein [Populus trichocarpa]
Length = 408
Score = 409 bits (1050), Expect = e-111
Identities = 229/466 (49%), Positives = 286/466 (61%), Gaps = 19/466 (4%)
Frame = -1
Query: 1442 MDLLRKAYSTASDEDDDKSGHVE---------RPALPPS-KRPKPGNPSTSFKSFPVTRP 1293
MDLL AYS +SDE+ + E RP +PP KR KP PS +F++
Sbjct: 1 MDLLCHAYSNSSDEEPEPEPESESKPEYGPEFRPFIPPPPKRFKPETPSQNFRT------ 54
Query: 1292 NYAPNHPIETPLPGRYISKRERAVLASAPPTDPNALLIISSPALGNISDSDIQHDILSSL 1113
E P+PGRYISKRERA+ A +P + +PA +L
Sbjct: 55 --------EAPVPGRYISKRERALSAQSPR--------VPNPATN------------PNL 86
Query: 1112 RHQRKGHTLFSQLPERLSVSLTGHDKAVNALQWSTTHXXXXXXXXXXXXXXXXXXLLASA 933
G SQ+P+RL+V L H KAVNAL WS +H LLASA
Sbjct: 87 NPNPPGRASLSQIPKRLAVDLRSHTKAVNALDWSPSHAH----------------LLASA 130
Query: 932 GMDHTICIWNVWSRNQKKARVLRNHTAAVKDVKWSELGLSVLSCGYDCTSRLLDIEKGLE 753
GMD T+C+WNVWSR+QK AR+ R H AAVKDVKWS GLSVLSCGYDC+SRL+D+EKG+E
Sbjct: 131 GMDQTVCVWNVWSRDQKIARLFRYHNAAVKDVKWSPQGLSVLSCGYDCSSRLIDVEKGIE 190
Query: 752 THVFKEDQXXXXVKFHPNNSNLFLSGGSKGIISLWDIRTEKVVHQYVRGLGPILDVEFTN 573
T +FKEDQ +KF P+NSN+FLSGGSKG + LWDIR VV +Y+RGLGPILDVEFT
Sbjct: 191 TQIFKEDQVVGVIKFCPDNSNIFLSGGSKGCLRLWDIRNGNVVREYIRGLGPILDVEFTI 250
Query: 572 DTKQFISSSDVSKGNVTENSIMVWDVSRQVPLSNQVYAEAYTCPCIRCHPFDPYFIAVKW 393
+ KQFISSSDVS N++ENSI+VWDVSRQVPLSNQVY EAYTCP +RCHPF+P F+A
Sbjct: 251 NGKQFISSSDVSGSNLSENSIIVWDVSRQVPLSNQVYVEAYTCPSVRCHPFEPCFVAQSN 310
Query: 392 KLHSDLLC*TP---------I*T*QVQEV*EPCCFWVSN*VQFQLRRGETCIWVLRWIYL 240
+ + +P + V C F + + + CI++ +
Sbjct: 311 ANYIAIFSSSPPFRLDKYKRYESHGVSGFPVKCNFSLDG-EKLVSGSSDGCIYIYNY--- 366
Query: 239 LVHSKSSELVKKVKAYEQACVDVVFHPSMPNVIASCSWNGDISVFE 102
+SSEL++K+K YEQAC+DVVFHP +PNVI SCSWNGD+S+FE
Sbjct: 367 ----RSSELIRKIKVYEQACIDVVFHPVLPNVIGSCSWNGDVSIFE 408
>ref|NP_200263.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
gi|332009122|gb|AED96505.1| transducin/WD40
domain-containing protein [Arabidopsis thaliana]
Length = 457
Score = 400 bits (1027), Expect = e-109
Identities = 230/483 (47%), Positives = 305/483 (63%), Gaps = 36/483 (7%)
Frame = -1
Query: 1442 MDLLRKAYSTASDEDDDK-------SGHVERPALPPSKRPKPGNPSTSFKSFPVTRPNYA 1284
MDL+ +Y+ SD++ + S P++P SKRP P +K P RP Y
Sbjct: 1 MDLICNSYANDSDDEPEPVTNERLTSKIAAAPSIP-SKRPYPVPEERQYK--PPRRP-YP 56
Query: 1283 PNH---------------PIETPLPGRYISKRERAVLASA---PPTDPNALLI---ISSP 1167
P+ P+ P+PGRY+SKRER++LAS P D ++ L SSP
Sbjct: 57 PHGSYSESQTSSSFSIPVPVPVPVPGRYVSKRERSLLASLSTIPTPDQSSDLSQKPYSSP 116
Query: 1166 A-LGNISDSDIQHDILSSLRHQRKGHTLFSQLPERLSVSLTGHDKAVNALQWSTTHXXXX 990
LG+ISDSD+ +LSS+RH+ KG +L +++P R+S+SLTGH KAV A+ WST+H
Sbjct: 117 TVLGSISDSDVPRHVLSSVRHRPKGSSLQTEMPSRMSISLTGHTKAVTAIDWSTSHVH-- 174
Query: 989 XXXXXXXXXXXXXXLLASAGMDHTICIWNVWSRNQKKARVLRNHTAAVKDVKWSELGLSV 810
LLASAG+D + +WNVWS ++KK R +H A VKDVKWS+ GLS+
Sbjct: 175 --------------LLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQGLSL 220
Query: 809 LSCGYDCTSRLLDIEKGLETHVFKEDQXXXXVKFHPNNSNLFLSGGSKGIISLWDIRTEK 630
LSCGYDCTSRL D+E+G+ET FKED+ VKFHP+N N+FLSGGSKG + LWDIR K
Sbjct: 221 LSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDNCNVFLSGGSKGSLRLWDIRANK 280
Query: 629 VVHQYVRGLGPILDVEFTNDTKQFISSSDVSKGNVTENSIMVWDVSRQVPLSNQVYAEAY 450
VH+YVR LGPILDVEF KQFISSSDVS N++EN+++VWD+SR+VPLSNQVY EAY
Sbjct: 281 FVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWDISREVPLSNQVYVEAY 340
Query: 449 TCPCIRCHPFDPYFIAVKWKLHSDLLC*TPI*T*QVQEV*EPCCFWVSN*VQFQLR---- 282
TCPCI+ HP DP FIA ++ + P ++ + WV+ F ++
Sbjct: 341 TCPCIKRHPQDPVFIAQSHGNYTAIFSTNP--PFKLNKYKRFEGHWVAG---FPIKCNFS 395
Query: 281 -RGETCIWVLR--WIYLLVHSKSSELVKKVKAYEQACVDVVFHPSMPNVIASCSWNGDIS 111
GET +Y+ + KS+ L+KK+KAYEQ CV+V +HP +PNV+A+CSWNG +S
Sbjct: 396 PDGETLASGSSDGSVYMYDY-KSTALIKKLKAYEQPCVNVSYHPVLPNVVAACSWNGQVS 454
Query: 110 VFE 102
VFE
Sbjct: 455 VFE 457