BLASTX nr result

ID: Panax21_contig00026033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026033
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278063.1| PREDICTED: transcription factor MYB39 [Vitis...    76   6e-12
ref|XP_002321627.1| predicted protein [Populus trichocarpa] gi|2...    72   2e-10
ref|XP_002318064.1| predicted protein [Populus trichocarpa] gi|2...    68   2e-09
emb|CAN76389.1| hypothetical protein VITISV_023590 [Vitis vinifera]    64   3e-08

>ref|XP_002278063.1| PREDICTED: transcription factor MYB39 [Vitis vinifera]
          Length = 367

 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 40/74 (54%), Positives = 48/74 (64%)
 Frame = -2

Query: 732 IDLTGYNSNLLVEYEQTQRSSYDQNQFEAKPNSKFISMPNLTNFDLRGMAKTESSDNSIS 553
           +D  GY+SNLL +Y QT R  +DQNQ EA  N  F S+P LTNFD   + +T+ SDNS S
Sbjct: 206 VDPMGYSSNLLSQYHQTIRP-FDQNQLEANSNVGFASLPGLTNFDQGNLTETDFSDNSAS 264

Query: 552 TMSSFLFNEGISSS 511
            M SF FNE   SS
Sbjct: 265 RMGSFFFNEAKESS 278


>ref|XP_002321627.1| predicted protein [Populus trichocarpa] gi|222868623|gb|EEF05754.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 41/74 (55%), Positives = 46/74 (62%)
 Frame = -2

Query: 732 IDLTGYNSNLLVEYEQTQRSSYDQNQFEAKPNSKFISMPNLTNFDLRGMAKTESSDNSIS 553
           IDLTGYN +L   Y  T RS  DQNQFE   N  F SMP+LT+FD   M+ T+ SDNS S
Sbjct: 205 IDLTGYNPSLSSVYHPTVRS-LDQNQFETSSNFGFTSMPSLTSFDHGSMSGTDFSDNSAS 263

Query: 552 TMSSFLFNEGISSS 511
            MSS   NE   SS
Sbjct: 264 RMSSMFLNEAKESS 277


>ref|XP_002318064.1| predicted protein [Populus trichocarpa] gi|222858737|gb|EEE96284.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 39/71 (54%), Positives = 43/71 (60%)
 Frame = -2

Query: 723 TGYNSNLLVEYEQTQRSSYDQNQFEAKPNSKFISMPNLTNFDLRGMAKTESSDNSISTMS 544
           TGYNSNL   Y  T R   DQNQFE   N  F SMP+LT+FD   M+ T+ SDNS S MS
Sbjct: 208 TGYNSNLSSVYHPTVRP-LDQNQFETSSNFVFTSMPSLTSFDHGSMSGTDFSDNSASRMS 266

Query: 543 SFLFNEGISSS 511
           S   NE   SS
Sbjct: 267 SMFLNEAKESS 277


>emb|CAN76389.1| hypothetical protein VITISV_023590 [Vitis vinifera]
          Length = 153

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 34/65 (52%), Positives = 41/65 (63%)
 Frame = -2

Query: 705 LLVEYEQTQRSSYDQNQFEAKPNSKFISMPNLTNFDLRGMAKTESSDNSISTMSSFLFNE 526
           +L +Y QT R  +DQNQ EA  N  F S+P LTNFD   + +T+ SDNS S M SF FNE
Sbjct: 1   MLSQYHQTIRP-FDQNQLEANSNVGFASLPGLTNFDHGNLTETDFSDNSASRMGSFFFNE 59

Query: 525 GISSS 511
              SS
Sbjct: 60  AKESS 64


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