BLASTX nr result

ID: Panax21_contig00024785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024785
         (1086 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632482.1| PREDICTED: WD repeat-containing protein 5-li...   535   e-150
gb|ABK22482.1| unknown [Picea sitchensis]                             522   e-146
ref|XP_002528910.1| WD-repeat protein, putative [Ricinus communi...   519   e-145
ref|XP_004143426.1| PREDICTED: WD repeat-containing protein 5-li...   519   e-145
ref|XP_003609656.1| WD repeat-containing protein [Medicago trunc...   516   e-144

>ref|XP_003632482.1| PREDICTED: WD repeat-containing protein 5-like [Vitis vinifera]
           gi|297735857|emb|CBI18611.3| unnamed protein product
           [Vitis vinifera]
          Length = 313

 Score =  535 bits (1378), Expect = e-150
 Identities = 254/311 (81%), Positives = 284/311 (91%), Gaps = 3/311 (0%)
 Frame = -2

Query: 938 MAEEP--IIKPYKLKHTLTGHKLAISSVKFSDDGKVLATSSADKTIRTWSPV-DGTQIQE 768
           MA +P   I PYKLK TLT HK A+S+VKFS DG +L +SSADKT+RTWS   D + +QE
Sbjct: 1   MASDPSEFITPYKLKQTLTAHKRAVSAVKFSSDGLLLGSSSADKTLRTWSTSGDFSTLQE 60

Query: 767 FHGHELGISDVAFSSDTRYLASASDDKTVRIWEVSTGSLIKTLTGHTNYVFCVNYNPQSN 588
           FHGH+ GISD+AFSSD+R++ SASDDKTVR+W+V TGSLIKTL GHTN+VFCVN+NPQSN
Sbjct: 61  FHGHDQGISDLAFSSDSRHVCSASDDKTVRLWDVETGSLIKTLQGHTNHVFCVNFNPQSN 120

Query: 587 LLASGSFDETVRVWDVKTGKCLKVLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDAST 408
           ++ SGSFDETVRVWDVKTGKCLKVLPAHSDPVTA +FNRDGSLIVSSSYDGLCRIWDAST
Sbjct: 121 MIVSGSFDETVRVWDVKTGKCLKVLPAHSDPVTAANFNRDGSLIVSSSYDGLCRIWDAST 180

Query: 407 GHCQKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYTTGKFLKTYSGHVNSKYCV 228
           GHC KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN++TGKFLKTY+GHVNSKYC+
Sbjct: 181 GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGHVNSKYCI 240

Query: 227 SSAFSITNGKYIVSGSEDNCVYLWELQSRKIVQKLEGHTDPVISVSCHPTENMIASGALG 48
           SS FS+TNGKYIV GSEDNCVYLWELQ+RKIVQKLEGHTD VISVSCHP++NMIASGALG
Sbjct: 241 SSTFSVTNGKYIVGGSEDNCVYLWELQTRKIVQKLEGHTDTVISVSCHPSQNMIASGALG 300

Query: 47  NDKTVKIWAQD 15
           +DKTVKIW Q+
Sbjct: 301 SDKTVKIWTQE 311


>gb|ABK22482.1| unknown [Picea sitchensis]
          Length = 314

 Score =  522 bits (1345), Expect = e-146
 Identities = 242/302 (80%), Positives = 272/302 (90%)
 Frame = -2

Query: 917 KPYKLKHTLTGHKLAISSVKFSDDGKVLATSSADKTIRTWSPVDGTQIQEFHGHELGISD 738
           KPYKLKH LTGHK A+SSVKFS DGK+L ++SADK++R WS  DG+  +E  GH  G+SD
Sbjct: 13  KPYKLKHILTGHKRAVSSVKFSADGKLLGSASADKSVRIWSAGDGSAKRELQGHAEGVSD 72

Query: 737 VAFSSDTRYLASASDDKTVRIWEVSTGSLIKTLTGHTNYVFCVNYNPQSNLLASGSFDET 558
           +A+SSD+ Y+ SASDDKT+RIW+V TG  IKTL GHTNYVFCVN+NPQSNL+ SGSFDET
Sbjct: 73  MAWSSDSHYVCSASDDKTLRIWDVHTGDCIKTLKGHTNYVFCVNFNPQSNLIVSGSFDET 132

Query: 557 VRVWDVKTGKCLKVLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDASTGHCQKTLIDD 378
           VR+WDV+TGKCLKVLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWD++TGHC KTLIDD
Sbjct: 133 VRIWDVRTGKCLKVLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDSATGHCLKTLIDD 192

Query: 377 ENPPVSFVKFSPNGKFILVGTLDNTLRLWNYTTGKFLKTYSGHVNSKYCVSSAFSITNGK 198
           ENPPVSFV FSPNGKFIL GTLDNTLRLWN+ TGKFLKTY+GHVNSKYC+SS FS+TNGK
Sbjct: 193 ENPPVSFVNFSPNGKFILAGTLDNTLRLWNFATGKFLKTYTGHVNSKYCISSTFSVTNGK 252

Query: 197 YIVSGSEDNCVYLWELQSRKIVQKLEGHTDPVISVSCHPTENMIASGALGNDKTVKIWAQ 18
           YIVSGSEDNCVYLW+LQ+R IVQKLEGHTD VISVSCHPTEN IASGAL NDKT++IW Q
Sbjct: 253 YIVSGSEDNCVYLWDLQARNIVQKLEGHTDTVISVSCHPTENKIASGALENDKTLRIWVQ 312

Query: 17  DN 12
           +N
Sbjct: 313 EN 314



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
 Frame = -2

Query: 920 IKPYKLKHTLTGHKLAISSVKFSDDGKVLATSSADKTIRTWSPVDGTQIQEFHGHE-LGI 744
           ++  K    L  H   +++V F+ DG ++ +SS D   R W    G  ++     E   +
Sbjct: 138 VRTGKCLKVLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDSATGHCLKTLIDDENPPV 197

Query: 743 SDVAFSSDTRYLASASDDKTVRIWEVSTGSLIKTLTGHTNYVFCVNYN---PQSNLLASG 573
           S V FS + +++ + + D T+R+W  +TG  +KT TGH N  +C++          + SG
Sbjct: 198 SFVNFSPNGKFILAGTLDNTLRLWNFATGKFLKTYTGHVNSKYCISSTFSVTNGKYIVSG 257

Query: 572 SFDETVRVWDVKTGKCLKVLPAHSDPVTAVHFNRDGSLIVSSSY--DGLCRIW 420
           S D  V +WD++    ++ L  H+D V +V  +   + I S +   D   RIW
Sbjct: 258 SEDNCVYLWDLQARNIVQKLEGHTDTVISVSCHPTENKIASGALENDKTLRIW 310


>ref|XP_002528910.1| WD-repeat protein, putative [Ricinus communis]
           gi|223531664|gb|EEF33490.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 322

 Score =  519 bits (1337), Expect = e-145
 Identities = 246/307 (80%), Positives = 275/307 (89%), Gaps = 7/307 (2%)
 Frame = -2

Query: 917 KPYKLKHTLTGHKLAISSVKFSDDGKVLATSSADKTIRTWSPVDG-------TQIQEFHG 759
           KPY L  TLTGHK AISS+KFS DG+ LA+SSADKT++T+S           T + EFHG
Sbjct: 13  KPYNLTQTLTGHKRAISSLKFSSDGRFLASSSADKTLKTYSLSPSNPPTSPLTPLHEFHG 72

Query: 758 HELGISDVAFSSDTRYLASASDDKTVRIWEVSTGSLIKTLTGHTNYVFCVNYNPQSNLLA 579
           HE G+SDV+FSSD+R+L SASDDKT+R+W+V+TGS IKTL GHTNYVFCVN+NPQSN++ 
Sbjct: 73  HEQGVSDVSFSSDSRFLVSASDDKTIRLWDVTTGSQIKTLNGHTNYVFCVNFNPQSNMIV 132

Query: 578 SGSFDETVRVWDVKTGKCLKVLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDASTGHC 399
           SGSFDETVR+WDVKTGKCLKVLPAHSDPVTAV FNRDGSLIVSSSYDGLCRIWD+ TGHC
Sbjct: 133 SGSFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHC 192

Query: 398 QKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYTTGKFLKTYSGHVNSKYCVSSA 219
            KTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWN +TGKFLKTY+GHVNSK+C+SSA
Sbjct: 193 VKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNSSTGKFLKTYTGHVNSKFCLSSA 252

Query: 218 FSITNGKYIVSGSEDNCVYLWELQSRKIVQKLEGHTDPVISVSCHPTENMIASGALGNDK 39
           FSITNGKYIVSGSEDNCVYLWELQ+RK+VQKLEGHTD VISV+CHPT+NMIASGALG D 
Sbjct: 253 FSITNGKYIVSGSEDNCVYLWELQTRKVVQKLEGHTDTVISVACHPTQNMIASGALGKDN 312

Query: 38  TVKIWAQ 18
           TV+IW Q
Sbjct: 313 TVRIWTQ 319


>ref|XP_004143426.1| PREDICTED: WD repeat-containing protein 5-like [Cucumis sativus]
           gi|449531922|ref|XP_004172934.1| PREDICTED: WD
           repeat-containing protein 5-like [Cucumis sativus]
          Length = 318

 Score =  519 bits (1336), Expect = e-145
 Identities = 243/302 (80%), Positives = 275/302 (91%), Gaps = 2/302 (0%)
 Frame = -2

Query: 917 KPYKLKHTLTGHKLAISSVKFSDDGKVLATSSADKTIRTWSPVDGT--QIQEFHGHELGI 744
           KPY L  TLT HK  ISSVKFS DG++L +SSADKT+RT+S  + T   +QEF GHE G+
Sbjct: 12  KPYTLSQTLTSHKRCISSVKFSADGRLLGSSSADKTLRTYSCSNSTVTPVQEFQGHEQGV 71

Query: 743 SDVAFSSDTRYLASASDDKTVRIWEVSTGSLIKTLTGHTNYVFCVNYNPQSNLLASGSFD 564
           SD+AFSSD+R+L SASDDKT+R+W+VSTGSL+KTL GHTNYVFCVN+NPQSN++ SGSFD
Sbjct: 72  SDLAFSSDSRFLVSASDDKTLRLWDVSTGSLVKTLNGHTNYVFCVNFNPQSNMIVSGSFD 131

Query: 563 ETVRVWDVKTGKCLKVLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDASTGHCQKTLI 384
           ETVR+WDVK+GKCLKVLPAHSDPVT V FNRDGSLIVSSSYDGLCRIWDASTGHC KTLI
Sbjct: 132 ETVRIWDVKSGKCLKVLPAHSDPVTGVDFNRDGSLIVSSSYDGLCRIWDASTGHCVKTLI 191

Query: 383 DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYTTGKFLKTYSGHVNSKYCVSSAFSITN 204
           DDENPPVSFVKFSPNGKFILVGTLDNTLRLWN++TGKFLKTY+GH NSK+C+SS FS+TN
Sbjct: 192 DDENPPVSFVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTN 251

Query: 203 GKYIVSGSEDNCVYLWELQSRKIVQKLEGHTDPVISVSCHPTENMIASGALGNDKTVKIW 24
           G+YI SGSEDNCVYLWELQ+R+IVQKLEGH+D VISVSCHP+ENMIASGA+GNDKTVKIW
Sbjct: 252 GRYIASGSEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIW 311

Query: 23  AQ 18
            Q
Sbjct: 312 TQ 313



 Score = 91.3 bits (225), Expect = 4e-16
 Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
 Frame = -2

Query: 920 IKPYKLKHTLTGHKLAISSVKFSDDGKVLATSSADKTIRTWSPVDGTQIQEFHGHE-LGI 744
           +K  K    L  H   ++ V F+ DG ++ +SS D   R W    G  ++     E   +
Sbjct: 139 VKSGKCLKVLPAHSDPVTGVDFNRDGSLIVSSSYDGLCRIWDASTGHCVKTLIDDENPPV 198

Query: 743 SDVAFSSDTRYLASASDDKTVRIWEVSTGSLIKTLTGHTNYVFCVNYN---PQSNLLASG 573
           S V FS + +++   + D T+R+W  STG  +KT TGHTN  FC++          +ASG
Sbjct: 199 SFVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGHTNSKFCISSTFSVTNGRYIASG 258

Query: 572 SFDETVRVWDVKTGKCLKVLPAHSDPVTAVHFNRDGSLIVSSSY--DGLCRIW 420
           S D  V +W+++T + ++ L  HSD V +V  +   ++I S +   D   +IW
Sbjct: 259 SEDNCVYLWELQTRQIVQKLEGHSDTVISVSCHPSENMIASGAVGNDKTVKIW 311


>ref|XP_003609656.1| WD repeat-containing protein [Medicago truncatula]
           gi|355510711|gb|AES91853.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 326

 Score =  516 bits (1328), Expect = e-144
 Identities = 243/309 (78%), Positives = 276/309 (89%), Gaps = 9/309 (2%)
 Frame = -2

Query: 917 KPYKLKHTLTGHKLAISSVKFSDDGKVLATSSADKTIRTWSPVDG---------TQIQEF 765
           KPY L  TLTGHK AIS+VKFS +G++LA+SSADKT+RT+   +          + +Q++
Sbjct: 15  KPYTLSQTLTGHKRAISAVKFSSNGRLLASSSADKTLRTYGFTNSDSDSNSLTLSPMQQY 74

Query: 764 HGHELGISDVAFSSDTRYLASASDDKTVRIWEVSTGSLIKTLTGHTNYVFCVNYNPQSNL 585
            GH+ G+SD+AFSSD+RYL SASDDKT+R+W+V TGSL+KTL GHTNYVFCVN+NPQSN+
Sbjct: 75  EGHQHGVSDLAFSSDSRYLVSASDDKTIRLWDVPTGSLVKTLHGHTNYVFCVNFNPQSNV 134

Query: 584 LASGSFDETVRVWDVKTGKCLKVLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDASTG 405
           + SGSFDETVRVWDVK+GKCLKVLPAHSDPVTAV FNRDG+LIVSSSYDGLCRIWDASTG
Sbjct: 135 IVSGSFDETVRVWDVKSGKCLKVLPAHSDPVTAVDFNRDGTLIVSSSYDGLCRIWDASTG 194

Query: 404 HCQKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNYTTGKFLKTYSGHVNSKYCVS 225
           HC KTLIDDENPPVS+VKFSPN KFILVGTLDN LRLWNY+TGKFLKTY+GHVNSKYC+S
Sbjct: 195 HCIKTLIDDENPPVSYVKFSPNAKFILVGTLDNNLRLWNYSTGKFLKTYTGHVNSKYCIS 254

Query: 224 SAFSITNGKYIVSGSEDNCVYLWELQSRKIVQKLEGHTDPVISVSCHPTENMIASGALGN 45
           S+FSITNGKY+V GSEDNC+YLW LQSRKIVQKLEGHTD V+SVSCHPTENMIASGALGN
Sbjct: 255 SSFSITNGKYVVGGSEDNCIYLWGLQSRKIVQKLEGHTDSVVSVSCHPTENMIASGALGN 314

Query: 44  DKTVKIWAQ 18
           DKTVKIW Q
Sbjct: 315 DKTVKIWTQ 323


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