BLASTX nr result

ID: Panax21_contig00024262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00024262
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002865245.1| predicted protein [Arabidopsis lyrata subsp....    96   7e-18
ref|XP_002304369.1| nbs-lrr resistance protein [Populus trichoca...    87   5e-15
ref|NP_193640.4| NB-ARC domain-containing disease resistance pro...    82   1e-13
emb|CAA16762.1| putative protein [Arabidopsis thaliana] gi|72687...    82   1e-13
gb|AEW24002.1| putative NBS-LRR disease resistance protein [Rubu...    82   2e-13

>ref|XP_002865245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311080|gb|EFH41504.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1082

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 77/260 (29%), Positives = 119/260 (45%), Gaps = 40/260 (15%)
 Frame = -1

Query: 674 KEIYKRLSSGNTKKIILVGERGVGKTWMAKKL--SDHAIRKRIFDFSLWIFLRRNYDKMS 501
           +EI K     N  +++LVGE G+GKTWMA+K+   DHA     +  +LW+ L +++D++S
Sbjct: 13  REILKSFEDDNVSRVMLVGEAGMGKTWMARKIFQEDHAKAGSCY-IALWLSLNKDFDEVS 71

Query: 500 LLESVARQLSLLVHSEEYEV--ADDNNEADXXXXXXXXXXXXXXKIHETLA--------K 351
           L E++A QLS+ +  EE E   +D+++  D              KIH  L+        +
Sbjct: 72  LYENIASQLSIFLDKEESEEDDSDEDDSEDDEDQLNRDLMSLKDKIHLKLSEIKLMGEGR 131

Query: 350 KRFLLVLDDEGSTMKEEEIMTELKMLMPPNQEDSYKILITRAINSSSHI--------PEE 195
           K  LLVLDDEGS   E+++M +L ++         KIL+TR       I         +E
Sbjct: 132 KYLLLVLDDEGSVTSEKKVMKDLHLVDFLAPYRPLKILLTRRKGEEDAIYKMKPHATADE 191

Query: 194 IHVKXXXXXXXXXXLQERIDATIDFARIKILFDDF--------------------IVKKC 75
           +H              + +  T     ++ LF+                      IV+  
Sbjct: 192 LHAYSDGKIQSHTLESQILRDTFAGYYLEDLFETLIKYDLLESLGNADYQGFIHRIVEMS 251

Query: 74  KSLPAAVSVVAKALNYFGKR 15
             LPAAV V+AK+LNY   R
Sbjct: 252 MGLPAAVVVIAKSLNYIALR 271


>ref|XP_002304369.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222841801|gb|EEE79348.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 1265

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 71/226 (31%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
 Frame = -1

Query: 674 KEIYKRLSSGNTKKIILVGERGVGKTWMAKKLSDHAIRKRIFDFSLWIFLRRNYDKMSLL 495
           K+I   L   +  ++ILVG  GVGKTWMAK++ + AI +      LW+ +   +D MSL 
Sbjct: 7   KKIVNWLKEDDAPRLILVGIAGVGKTWMAKRIRECAITEGY--AVLWVSMTVKHDNMSLY 64

Query: 494 ESVARQLSLLVHSEEYEVAD-DNNEADXXXXXXXXXXXXXXKIHETLAKKRFLLVLDDEG 318
           + +A QLSLL   E+ E  D D  + +              +I E    K  LL+LDDE 
Sbjct: 65  KIIAHQLSLLSTIEKLEEDDIDEEKEESPDNLKKKVSEKLEEIRE--ENKPLLLILDDEE 122

Query: 317 STMKEEEIMTELKMLMPPNQEDSYKILITRAINSSSHIPE----EIHVKXXXXXXXXXXL 150
                 + + EL+ L   N +   KILI+R         E    EI V+          L
Sbjct: 123 PKRYGSKDLLELEPLCSVNSQHKLKILISRRNIDDGQTAETSQREIKVEPLSEEDSLSLL 182

Query: 149 QERIDATIDFARIKILFDDFIVKKCKSLPAAVSVVAKALNYFGKRD 12
           ++R+      +  +  F +   +K K LPAA+ ++A+ALN  G+ D
Sbjct: 183 KKRVTRVSQSSAFE-KFSNATAEKSKGLPAAIILMAEALNQVGEHD 227


>ref|NP_193640.4| NB-ARC domain-containing disease resistance protein [Arabidopsis
           thaliana] gi|334302784|sp|P0CB16.2|DRL25_ARATH RecName:
           Full=Putative disease resistance protein At4g19050
           gi|332658734|gb|AEE84134.1| NB-ARC domain-containing
           disease resistance protein [Arabidopsis thaliana]
          Length = 1201

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 72/234 (30%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
 Frame = -1

Query: 677 LKEIYKRLSS-GNTKKIILVGERGVGKTWMAKKLSDHAIRKRIFDFSLWIFLRRNY-DKM 504
           LK+I   L   G   K +LVGE G+GKTW+AK++S    +++     LW+ L +   D+ 
Sbjct: 13  LKKIMDSLGQDGVPSKTVLVGEAGIGKTWLAKEVSQRVTQEKYN--VLWLHLNKKIEDEK 70

Query: 503 SLLESVARQLSLLVHSEEYEVADDNNEADXXXXXXXXXXXXXXKIHETLAKKRFLLVLDD 324
           SL E +A QLS++    E+E  ++ +E D                H+   K   LL+LDD
Sbjct: 71  SLYEILAAQLSIIY---EFEEGEEPDELDYPLESLKEKIKEEMIKHK---KDNLLLILDD 124

Query: 323 EGSTMKEEEIMTELKMLMPPNQEDSYKILITRAINSSSHIPEEIHVKXXXXXXXXXXLQE 144
           EGS   EE++M EL +     +  + KIL+TR           I V           L +
Sbjct: 125 EGSMTTEEDVMQELNLQDFLKEYSAVKILVTRRDEREEKESTTIKVGPLTEKESLDLLHD 184

Query: 143 RIDATIDFAR------IKILFDD----------FIVKKCKSLPAAVSVVAKALN 30
             D    F        +K L D+           I+ K K LPAA+ V+ K+LN
Sbjct: 185 AEDLLTSFTSEDWPVLLKRLCDNKEIKEPTLMSCILSKSKGLPAAIVVLIKSLN 238


>emb|CAA16762.1| putative protein [Arabidopsis thaliana] gi|7268700|emb|CAB78907.1|
           putative protein [Arabidopsis thaliana]
          Length = 1405

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 72/234 (30%), Positives = 106/234 (45%), Gaps = 18/234 (7%)
 Frame = -1

Query: 677 LKEIYKRLSS-GNTKKIILVGERGVGKTWMAKKLSDHAIRKRIFDFSLWIFLRRNY-DKM 504
           LK+I   L   G   K +LVGE G+GKTW+AK++S    +++     LW+ L +   D+ 
Sbjct: 13  LKKIMDSLGQDGVPSKTVLVGEAGIGKTWLAKEVSQRVTQEKYN--VLWLHLNKKIEDEK 70

Query: 503 SLLESVARQLSLLVHSEEYEVADDNNEADXXXXXXXXXXXXXXKIHETLAKKRFLLVLDD 324
           SL E +A QLS++    E+E  ++ +E D                H+   K   LL+LDD
Sbjct: 71  SLYEILAAQLSIIY---EFEEGEEPDELDYPLESLKEKIKEEMIKHK---KDNLLLILDD 124

Query: 323 EGSTMKEEEIMTELKMLMPPNQEDSYKILITRAINSSSHIPEEIHVKXXXXXXXXXXLQE 144
           EGS   EE++M EL +     +  + KIL+TR           I V           L +
Sbjct: 125 EGSMTTEEDVMQELNLQDFLKEYSAVKILVTRRDEREEKESTTIKVGPLTEKESLDLLHD 184

Query: 143 RIDATIDFAR------IKILFDD----------FIVKKCKSLPAAVSVVAKALN 30
             D    F        +K L D+           I+ K K LPAA+ V+ K+LN
Sbjct: 185 AEDLLTSFTSEDWPVLLKRLCDNKEIKEPTLMSCILSKSKGLPAAIVVLIKSLN 238


>gb|AEW24002.1| putative NBS-LRR disease resistance protein [Rubus sp. LAK-2011]
          Length = 263

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 65/222 (29%), Positives = 100/222 (45%), Gaps = 19/222 (8%)
 Frame = -1

Query: 611 GVGKTWMAKKLSDHAIRKRIFDFSLWIFLRRNYDKMSLLESVARQLSLLVHSEEYEVADD 432
           GVGKTW A+++      K     +LW+++   YD  SL E +ARQLSL    EE+E  DD
Sbjct: 2   GVGKTWTAREIISR--EKDSIHETLWLYVNNIYDSESLEEKIARQLSLFSIYEEWEDDDD 59

Query: 431 NNEADXXXXXXXXXXXXXXKIHETLA-----KKRFLLVLDDEGSTMKEEEIMTELKMLMP 267
            ++ +              K+    +     KK FLLVLDD     K   I+ E+  L+ 
Sbjct: 60  GDDVEEEQSLEKLKSEISTKLEHLRSAAHKEKKLFLLVLDDVQDVQK---IVQEVNNLLS 116

Query: 266 PNQEDSYKILITRAINSSSHIPEEIHVKXXXXXXXXXXLQERIDATIDFARI------KI 105
           PN ++S+K+LITR  +        ++ +           +    +T +   +      K 
Sbjct: 117 PNGDNSFKVLITRGESDGKGTTLGMNKEIETDDTRVRVHEIETLSTDESLALLGEKIKKA 176

Query: 104 LFD--------DFIVKKCKSLPAAVSVVAKALNYFGKRDSGV 3
           +FD          IV   K +P  +  +AKA+NY   +DSGV
Sbjct: 177 VFDCPSFEKLSKAIVDMSKGIPTVLITIAKAINYLADKDSGV 218


Top