BLASTX nr result

ID: Panax21_contig00023433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023433
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAI65950.1| homoserine kinase [Solanum tuberosum]                 165   1e-38
ref|XP_002277887.1| PREDICTED: homoserine kinase-like [Vitis vin...   162   6e-38
emb|CAN67551.1| hypothetical protein VITISV_035502 [Vitis vinifera]   162   6e-38
ref|XP_002517698.1| homoserine kinase, putative [Ricinus communi...   155   1e-35
ref|XP_002328135.1| predicted protein [Populus trichocarpa] gi|2...   154   2e-35

>emb|CAI65950.1| homoserine kinase [Solanum tuberosum]
          Length = 189

 Score =  165 bits (417), Expect = 1e-38
 Identities = 94/143 (65%), Positives = 111/143 (77%), Gaps = 4/143 (2%)
 Frame = +2

Query: 353 SLCYQSSIKLNSHQSN-FSIPN--LPLLSSTTRWSNLSVSSFCSSKALTI-EPEPVFTSV 520
           ++ YQS +KLN   SN FS P    P+ +  +   NLS  S  +   +TI EPEPVFTSV
Sbjct: 1   AITYQSPMKLNFITSNGFSNPPSLYPINTHFSFGFNLSSVSSKTQTHITIPEPEPVFTSV 60

Query: 521 KSFAPATIANLGPGFDFLGCAVDGLGDFVTLRVDPHVHPGEISISEITGVGNSSEKLSKD 700
           KSFAPAT+ANLGPGFDFLGCAVDG+GDFVTLRVDP+V  GE+SIS+I+G GN   +LSKD
Sbjct: 61  KSFAPATVANLGPGFDFLGCAVDGIGDFVTLRVDPNVKAGEVSISDISGAGN---RLSKD 117

Query: 701 PLLNCAGIAAISVMRMLNIRSVG 769
           PL NCAGIAAISVM+MLNI+SVG
Sbjct: 118 PLSNCAGIAAISVMKMLNIQSVG 140


>ref|XP_002277887.1| PREDICTED: homoserine kinase-like [Vitis vinifera]
          Length = 368

 Score =  162 bits (411), Expect = 6e-38
 Identities = 83/109 (76%), Positives = 95/109 (87%), Gaps = 2/109 (1%)
 Frame = +2

Query: 449 NLSVSSF-CS-SKALTIEPEPVFTSVKSFAPATIANLGPGFDFLGCAVDGLGDFVTLRVD 622
           NL   SF C+ SK LT +P+PVFTSVKSFAPAT+ANLGPGFDFLG AVDG+GDFV+LRVD
Sbjct: 24  NLHARSFRCNFSKTLTADPQPVFTSVKSFAPATVANLGPGFDFLGAAVDGIGDFVSLRVD 83

Query: 623 PHVHPGEISISEITGVGNSSEKLSKDPLLNCAGIAAISVMRMLNIRSVG 769
           P V PGEISI +I GVGNS++KLSK+PL NCAGIAAISVM+ML +RSVG
Sbjct: 84  PDVRPGEISIVDIDGVGNSAKKLSKNPLWNCAGIAAISVMKMLGVRSVG 132


>emb|CAN67551.1| hypothetical protein VITISV_035502 [Vitis vinifera]
          Length = 368

 Score =  162 bits (411), Expect = 6e-38
 Identities = 83/109 (76%), Positives = 95/109 (87%), Gaps = 2/109 (1%)
 Frame = +2

Query: 449 NLSVSSF-CS-SKALTIEPEPVFTSVKSFAPATIANLGPGFDFLGCAVDGLGDFVTLRVD 622
           NL   SF C+ SK LT +P+PVFTSVKSFAPAT+ANLGPGFDFLG AVDG+GDFV+LRVD
Sbjct: 24  NLHARSFRCNFSKTLTADPQPVFTSVKSFAPATVANLGPGFDFLGAAVDGIGDFVSLRVD 83

Query: 623 PHVHPGEISISEITGVGNSSEKLSKDPLLNCAGIAAISVMRMLNIRSVG 769
           P V PGEISI +I GVGNS++KLSK+PL NCAGIAAISVM+ML +RSVG
Sbjct: 84  PDVRPGEISIVDIDGVGNSAKKLSKNPLWNCAGIAAISVMKMLGVRSVG 132


>ref|XP_002517698.1| homoserine kinase, putative [Ricinus communis]
           gi|223543330|gb|EEF44862.1| homoserine kinase, putative
           [Ricinus communis]
          Length = 367

 Score =  155 bits (391), Expect = 1e-35
 Identities = 85/141 (60%), Positives = 104/141 (73%), Gaps = 2/141 (1%)
 Frame = +2

Query: 353 SLCYQSSIK--LNSHQSNFSIPNLPLLSSTTRWSNLSVSSFCSSKALTIEPEPVFTSVKS 526
           ++C+ S +K    S  ++F+ P  PLL            +F      T EPEPVFTSVKS
Sbjct: 2   AICFYSPLKPISLSPSTHFTKPQ-PLLRC----------NFSLPTITTTEPEPVFTSVKS 50

Query: 527 FAPATIANLGPGFDFLGCAVDGLGDFVTLRVDPHVHPGEISISEITGVGNSSEKLSKDPL 706
           FAPAT+ANLGPGFDFLGCAVDGLGDFVT+ VDP VHPGEISI+EI+G  ++S+KLSK+PL
Sbjct: 51  FAPATVANLGPGFDFLGCAVDGLGDFVTVTVDPSVHPGEISIAEISGT-HASKKLSKNPL 109

Query: 707 LNCAGIAAISVMRMLNIRSVG 769
            NCAGIA I+ M+MLN+RSVG
Sbjct: 110 WNCAGIAGIATMKMLNVRSVG 130


>ref|XP_002328135.1| predicted protein [Populus trichocarpa] gi|222837650|gb|EEE76015.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  154 bits (389), Expect = 2e-35
 Identities = 85/143 (59%), Positives = 101/143 (70%), Gaps = 4/143 (2%)
 Frame = +2

Query: 353 SLCYQSSIKLNSHQSNFSIPNLPLLSSTTRWS----NLSVSSFCSSKALTIEPEPVFTSV 520
           ++C+ S +K          P  P  S TT  +    N+   +F      T EPEPVFTSV
Sbjct: 2   AICFLSPLK----------PITPTTSLTTNLNPKKPNILRCNFSLPIITTTEPEPVFTSV 51

Query: 521 KSFAPATIANLGPGFDFLGCAVDGLGDFVTLRVDPHVHPGEISISEITGVGNSSEKLSKD 700
           +SFAPAT+ANLGPGFDFLGCAVDGLGDFV+LRVDP VHPGE+SIS+I+G  N    LSK+
Sbjct: 52  RSFAPATVANLGPGFDFLGCAVDGLGDFVSLRVDPSVHPGELSISDISGTKN----LSKN 107

Query: 701 PLLNCAGIAAISVMRMLNIRSVG 769
           PL NCAGIAAI+ M+MLNIRSVG
Sbjct: 108 PLNNCAGIAAIATMKMLNIRSVG 130


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