BLASTX nr result

ID: Panax21_contig00023407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023407
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284551.1| PREDICTED: uncharacterized protein LOC100267...   149   4e-34
ref|XP_002273372.2| PREDICTED: uncharacterized protein LOC100244...   146   3e-33
emb|CAN65070.1| hypothetical protein VITISV_003953 [Vitis vinifera]   144   2e-32
gb|ABK92540.1| unknown [Populus trichocarpa]                          144   2e-32
ref|XP_002316652.1| predicted protein [Populus trichocarpa] gi|2...   143   3e-32

>ref|XP_002284551.1| PREDICTED: uncharacterized protein LOC100267532 [Vitis vinifera]
          Length = 320

 Score =  149 bits (377), Expect = 4e-34
 Identities = 88/153 (57%), Positives = 107/153 (69%), Gaps = 4/153 (2%)
 Frame = +2

Query: 119 PTGKPLVSSKFGHRKIV*VTPEGGKTLRVSNPKRNDTLESMWKIITDGCPMP*TRHLRKS 298
           P  KPLVS +FGHR+ V  +PE GK L VS PKR+DTLES WK ITDG PMP TRHL+K+
Sbjct: 173 PAEKPLVSMRFGHRRAVKSSPEAGKVLGVSKPKRHDTLESTWKTITDGRPMPLTRHLKKA 232

Query: 299 DTWETHCDHHHHNSADLQDHNLKMIKSETFTDHLSSSGNNSSLAWTSSWGSGELKKDTSL 478
           D+ E+        S DL    +K  KSETFTD    S  NSS+A  SS GSG++K++ SL
Sbjct: 233 DSLES-----QRCSIDLTPQKVK--KSETFTDR---SSTNSSVA--SSPGSGKMKREPSL 280

Query: 479 SQDEFNKRVD----EFNEDMRLQRQESLNQFME 565
           SQDE N+RV+    +FNE+MRLQRQESLNQ+ E
Sbjct: 281 SQDELNRRVEAFIKKFNEEMRLQRQESLNQYNE 313


>ref|XP_002273372.2| PREDICTED: uncharacterized protein LOC100244739 [Vitis vinifera]
          Length = 330

 Score =  146 bits (369), Expect = 3e-33
 Identities = 85/154 (55%), Positives = 104/154 (67%), Gaps = 6/154 (3%)
 Frame = +2

Query: 122 TGKPLVSSKFGHRKIV*VTPE--GGKTLRVSNPKRNDTLESMWKIITDGCPMP*TRHLRK 295
           T KPLVSS+FGHRK +  +PE  GGK LRVS PKR++TLE+ WK+ITDG  MP TRHL+K
Sbjct: 177 TEKPLVSSRFGHRKPIKASPEASGGKVLRVSKPKRHETLENTWKMITDGRHMPLTRHLKK 236

Query: 296 SDTWETHCDHHHHNSADLQDHNLKMIKSETFTDHLSSSGNNSSLAWTSSWGSGELKKDTS 475
           SDTWE   +H  H          ++ KSETF D      NN   + TS   S +L+KD S
Sbjct: 237 SDTWE---NHGRHIVVREDSSPQRVNKSETFKDRT----NNPPPSLTSPLDSVKLRKDPS 289

Query: 476 LSQDEFNKRVD----EFNEDMRLQRQESLNQFME 565
           LSQDE N+RV+    +FNE+MRLQRQESLNQ+ E
Sbjct: 290 LSQDELNRRVEAFIKKFNEEMRLQRQESLNQYKE 323


>emb|CAN65070.1| hypothetical protein VITISV_003953 [Vitis vinifera]
          Length = 407

 Score =  144 bits (363), Expect = 2e-32
 Identities = 84/154 (54%), Positives = 103/154 (66%), Gaps = 6/154 (3%)
 Frame = +2

Query: 122 TGKPLVSSKFGHRKIV*VTPE--GGKTLRVSNPKRNDTLESMWKIITDGCPMP*TRHLRK 295
           T KPLVSS+FGHRK +  +PE  GGK LRVS PKR++TLE+ WK+ITDG  MP TRHL+K
Sbjct: 254 TEKPLVSSRFGHRKPIKASPEASGGKVLRVSKPKRHETLENTWKMITDGRHMPLTRHLKK 313

Query: 296 SDTWETHCDHHHHNSADLQDHNLKMIKSETFTDHLSSSGNNSSLAWTSSWGSGELKKDTS 475
           SDTWE   +H  H          ++ KSETF D      NN   + TS   S +L+KD S
Sbjct: 314 SDTWE---NHGRHIVVREDSSPQRVNKSETFKDRT----NNPPPSLTSPLDSVKLRKDPS 366

Query: 476 LSQDEFNKRVD----EFNEDMRLQRQESLNQFME 565
           LSQDE N+RV+    +FNE+M LQRQESLNQ+ E
Sbjct: 367 LSQDELNRRVEAFIKKFNEEMXLQRQESLNQYKE 400


>gb|ABK92540.1| unknown [Populus trichocarpa]
          Length = 354

 Score =  144 bits (362), Expect = 2e-32
 Identities = 82/157 (52%), Positives = 107/157 (68%), Gaps = 8/157 (5%)
 Frame = +2

Query: 119 PTGKPLVSSKFGHRKIV*VTPEGGKTLRVSNPKRNDTLESMWKIITDGCPMP*TRHLRKS 298
           P  KPLVSS+FGHRK V  +PEGG+ LRV+ PKR++TLE+ WK IT+G  MP TRH++KS
Sbjct: 194 PVEKPLVSSRFGHRKFVKASPEGGRALRVAKPKRHETLENTWKTITEGRAMPITRHVKKS 253

Query: 299 ----DTWETHCDHHHHNSADLQDHNLKMIKSETFTDHLSSSGNNSSLAWTSSWGSGELKK 466
               DTWE H      N++ +  H +K  KS TF D   ++     L  +SS  SG+L+K
Sbjct: 254 ETFKDTWENH--GSQFNTSVVDPHEVK--KSTTFKD---TTNYQLPLVNSSSPSSGKLRK 306

Query: 467 DTSLSQDEFNKRVD----EFNEDMRLQRQESLNQFME 565
           + SLSQDE N+RV+    +FNE+MRLQRQESLNQ+ E
Sbjct: 307 EPSLSQDELNRRVEAFIKKFNEEMRLQRQESLNQYKE 343


>ref|XP_002316652.1| predicted protein [Populus trichocarpa] gi|222859717|gb|EEE97264.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  143 bits (361), Expect = 3e-32
 Identities = 82/157 (52%), Positives = 106/157 (67%), Gaps = 8/157 (5%)
 Frame = +2

Query: 119 PTGKPLVSSKFGHRKIV*VTPEGGKTLRVSNPKRNDTLESMWKIITDGCPMP*TRHLRKS 298
           P  KPLVSS+FGHRK V  +PEGG+ LRV+ PKR++TLE+ WK IT+G  MP TRH++KS
Sbjct: 170 PVEKPLVSSRFGHRKFVKASPEGGRALRVAKPKRHETLENTWKTITEGRAMPITRHVKKS 229

Query: 299 ----DTWETHCDHHHHNSADLQDHNLKMIKSETFTDHLSSSGNNSSLAWTSSWGSGELKK 466
               DTWE H      N++ +  H +K  KS TF D    +     L  +SS  SG+L+K
Sbjct: 230 ETFKDTWENH--GSQFNTSVVDPHEVK--KSTTFKDR---TNYQLPLVNSSSPSSGKLRK 282

Query: 467 DTSLSQDEFNKRVD----EFNEDMRLQRQESLNQFME 565
           + SLSQDE N+RV+    +FNE+MRLQRQESLNQ+ E
Sbjct: 283 EPSLSQDELNRRVEAFIKKFNEEMRLQRQESLNQYKE 319


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