BLASTX nr result

ID: Panax21_contig00023390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023390
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42242.1| unknown [Lotus japonicus]                              197   1e-48
ref|XP_002513958.1| cytochrome C oxidase polypeptide vib, putati...   196   4e-48
ref|NP_173661.1| cytochrome C oxidase 6B [Arabidopsis thaliana] ...   193   3e-47
gb|AAM63485.1| cytochrome c oxidase subunit, putative [Arabidops...   192   6e-47
emb|CBI25309.3| unnamed protein product [Vitis vinifera]              191   7e-47

>gb|AFK42242.1| unknown [Lotus japonicus]
          Length = 177

 Score =  197 bits (501), Expect = 1e-48
 Identities = 98/178 (55%), Positives = 121/178 (67%), Gaps = 5/178 (2%)
 Frame = -1

Query: 582 NTPSLSEQYHLEKDGNPDIEVKNPVTAASEDVVIPKXXXXXXXXXXXXXXXXXXXXXXXX 403
           N+P+L+EQY+++      + V+ PV    ++V  PK                        
Sbjct: 8   NSPTLAEQYYVKDKQEEKVVVEKPVEV--KEVETPKEVAPEETVVEKTVEETTPVAPAVV 65

Query: 402 XXXXXSNEVGETAPAADE----ESSESTEQENAGDEEV-EQTPEIKLETAPADYRFPTTN 238
                  E  E  P+A+E    ++SES E+EN+GD+E  E+TPEIKLETAP D+RFPTTN
Sbjct: 66  ------EESSEVPPSAEESTEVQTSESVEEENSGDQEAAEETPEIKLETAPVDFRFPTTN 119

Query: 237 QSRHCFTRYIEYHRCIAAKGDGAPECDKFAKYYRSLCPGEWIDRWNEQRENGTFPGPL 64
           Q+RHCFTRYIEYHRC+AAKGDGAPECDKFAKYYR+LCPGEW+DRWNEQRENGTFPGPL
Sbjct: 120 QTRHCFTRYIEYHRCVAAKGDGAPECDKFAKYYRALCPGEWVDRWNEQRENGTFPGPL 177


>ref|XP_002513958.1| cytochrome C oxidase polypeptide vib, putative [Ricinus communis]
           gi|223547044|gb|EEF48541.1| cytochrome C oxidase
           polypeptide vib, putative [Ricinus communis]
          Length = 191

 Score =  196 bits (497), Expect = 4e-48
 Identities = 103/187 (55%), Positives = 121/187 (64%), Gaps = 12/187 (6%)
 Frame = -1

Query: 588 SGNTPSLSEQYHL-EKDGNPDI-----EVKN---PVTAASEDVVIPKXXXXXXXXXXXXX 436
           +  TPSLSEQY L +K+  PD+     EVK    P T  S D  + K             
Sbjct: 5   TAGTPSLSEQYLLKDKEEKPDVGPKPVEVKEDVKPETIVSVDAAVVKAEEEPAAAAEEKA 64

Query: 435 XXXXXXXXXXXXXXXXS--NEVGETAPAADEESSESTEQENAGDEEV-EQTPEIKLETAP 265
                                  E  PA D ESSE+TE++N+ ++E  E+TP+IKLETAP
Sbjct: 65  EDTAGGGATEESTITNPAAESSSEDTPAVDTESSETTEEQNSTEQEAAEETPKIKLETAP 124

Query: 264 ADYRFPTTNQSRHCFTRYIEYHRCIAAKGDGAPECDKFAKYYRSLCPGEWIDRWNEQREN 85
           AD+RFPTTNQ+RHCFTRY+EYHRC AAKG+GAPECDKFAK+YRSLCPGEWIDRWNEQREN
Sbjct: 125 ADFRFPTTNQTRHCFTRYVEYHRCTAAKGEGAPECDKFAKFYRSLCPGEWIDRWNEQREN 184

Query: 84  GTFPGPL 64
           GTFPGPL
Sbjct: 185 GTFPGPL 191


>ref|NP_173661.1| cytochrome C oxidase 6B [Arabidopsis thaliana]
           gi|75193983|sp|Q9S7L9.1|CX6B1_ARATH RecName:
           Full=Cytochrome c oxidase subunit 6b-1; Short=AtCOX6b-1
           gi|6587843|gb|AAF18532.1|AC006551_18 Subunit 6b of
           cytochrome c oxidase [Arabidopsis thaliana]
           gi|6518353|dbj|BAA87883.1| subunit 6b of cytochrome c
           oxidase [Arabidopsis thaliana]
           gi|17381082|gb|AAL36353.1| putative cytochrome c oxidase
           subunit [Arabidopsis thaliana]
           gi|20465723|gb|AAM20330.1| putative cytochrome c oxidase
           subunit [Arabidopsis thaliana]
           gi|332192122|gb|AEE30243.1| cytochrome C oxidase 6B
           [Arabidopsis thaliana]
          Length = 191

 Score =  193 bits (490), Expect = 3e-47
 Identities = 104/193 (53%), Positives = 121/193 (62%), Gaps = 16/193 (8%)
 Frame = -1

Query: 594 AESGNTPSLSEQYHLEKDGNPD-----IEVKN---PVTAASEDVVIPKXXXXXXXXXXXX 439
           A +  TPSLSEQYHLEK+   D     +EVK     VT  +E+V   +            
Sbjct: 4   AVNAQTPSLSEQYHLEKEVKQDTSAKPVEVKEVAPEVTTQAEEVKTEQAKEESPVEEAVS 63

Query: 438 XXXXXXXXXXXXXXXXXSNEVGETAPAADEESSEST-------EQENAGDEEVEQTP-EI 283
                              EV   APAA E+++E T         ENA +E  E+TP EI
Sbjct: 64  VVEEKSESAPES------TEVASEAPAAAEDNAEETPAAAEENNDENASEEVAEETPDEI 117

Query: 282 KLETAPADYRFPTTNQSRHCFTRYIEYHRCIAAKGDGAPECDKFAKYYRSLCPGEWIDRW 103
           KLETAPAD+RFPTTNQ+RHCFTRY+EYHRC+AAKGD APECDKFAK+YRSLCP EW+DRW
Sbjct: 118 KLETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWVDRW 177

Query: 102 NEQRENGTFPGPL 64
           NEQRENGTFPGPL
Sbjct: 178 NEQRENGTFPGPL 190


>gb|AAM63485.1| cytochrome c oxidase subunit, putative [Arabidopsis thaliana]
          Length = 191

 Score =  192 bits (487), Expect = 6e-47
 Identities = 103/193 (53%), Positives = 121/193 (62%), Gaps = 16/193 (8%)
 Frame = -1

Query: 594 AESGNTPSLSEQYHLEKDGNPD-----IEVKN---PVTAASEDVVIPKXXXXXXXXXXXX 439
           A +  TPSLSEQYHLEK+   D     +EVK     VT  +E+V   +            
Sbjct: 4   AVNAQTPSLSEQYHLEKEVKQDTSAKPVEVKEVAPEVTTQAEEVKTEQAKEESPVEEAVS 63

Query: 438 XXXXXXXXXXXXXXXXXSNEVGETAPAADEESSEST-------EQENAGDEEVEQTP-EI 283
                              EV   APAA ++++E T         ENA +E  E+TP EI
Sbjct: 64  VVEEKSESAPES------TEVASEAPAAAQDNAEETPAAAEENNDENASEEVAEETPDEI 117

Query: 282 KLETAPADYRFPTTNQSRHCFTRYIEYHRCIAAKGDGAPECDKFAKYYRSLCPGEWIDRW 103
           KLETAPAD+RFPTTNQ+RHCFTRY+EYHRC+AAKGD APECDKFAK+YRSLCP EW+DRW
Sbjct: 118 KLETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWVDRW 177

Query: 102 NEQRENGTFPGPL 64
           NEQRENGTFPGPL
Sbjct: 178 NEQRENGTFPGPL 190


>emb|CBI25309.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score =  191 bits (486), Expect = 7e-47
 Identities = 106/201 (52%), Positives = 123/201 (61%), Gaps = 14/201 (6%)
 Frame = -1

Query: 624 SFPLSSVIIMAES--GNTPSLSEQYHLEKDGN-----PDIEVKNPVTAASEDVVIPKXXX 466
           SF L ++  MA    G   +L E Y L  DG        IEVK PV +ASE+VV  K   
Sbjct: 25  SFLLKNITSMASPNVGQDVTLHEHYMLG-DGKGIESVEKIEVKIPVDSASENVVTEKIEE 83

Query: 465 XXXXXXXXXXXXXXXXXXXXXXXXXXSNE-------VGETAPAADEESSESTEQENAGDE 307
                                     S E       + E  P A EESS + E+EN+GD+
Sbjct: 84  TPAVTKEATEAAPTAAEEIIEVTSAASQEATPAAKDISEATPDAAEESSNNVEEENSGDQ 143

Query: 306 EVEQTPEIKLETAPADYRFPTTNQSRHCFTRYIEYHRCIAAKGDGAPECDKFAKYYRSLC 127
           EVE T EIKLETAPAD+RFP+TNQ+RHCFTRYIEYHRC A KG+GA ECDKFAK+YRSLC
Sbjct: 144 EVEHTSEIKLETAPADFRFPSTNQTRHCFTRYIEYHRCTAVKGEGASECDKFAKFYRSLC 203

Query: 126 PGEWIDRWNEQRENGTFPGPL 64
           P EW++RWNEQRENGTFPGPL
Sbjct: 204 PAEWVERWNEQRENGTFPGPL 224


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