BLASTX nr result

ID: Panax21_contig00023389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023389
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520213.1| conserved hypothetical protein [Ricinus comm...   112   3e-23
ref|XP_002311863.1| predicted protein [Populus trichocarpa] gi|1...   106   2e-21
ref|XP_002311792.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_003519417.1| PREDICTED: uncharacterized protein LOC100797...    94   1e-17
ref|XP_003517859.1| PREDICTED: uncharacterized protein LOC100796...    93   2e-17

>ref|XP_002520213.1| conserved hypothetical protein [Ricinus communis]
           gi|223540705|gb|EEF42268.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 334

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/104 (51%), Positives = 74/104 (71%)
 Frame = +2

Query: 35  IRDDRRRLLDSTGASIMGRIPSARGVGVLPQINSLRNSYSPWTLDRLRRRSPDGVFGTSR 214
           I D R+ +     ASI+GRIPS R    LP+++S RNSYSPWTLD +RRRSPD + G+SR
Sbjct: 128 IVDTRQHMPAPKEASILGRIPSTRSADDLPRMDSSRNSYSPWTLDHIRRRSPDRIIGSSR 187

Query: 215 GASPPRNEEQSRRRPIIRAYDDVRSAAYLSKDGLELSRSMGTAS 346
             SPPRN E+ +RRP+ R  DD R+ +Y+SKD L+  R +G+++
Sbjct: 188 ALSPPRNVEEIQRRPLSRTLDDARAVSYMSKDVLDGRRPVGSST 231


>ref|XP_002311863.1| predicted protein [Populus trichocarpa] gi|118487432|gb|ABK95544.1|
           unknown [Populus trichocarpa]
           gi|222851683|gb|EEE89230.1| predicted protein [Populus
           trichocarpa]
          Length = 330

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/102 (50%), Positives = 70/102 (68%)
 Frame = +2

Query: 41  DDRRRLLDSTGASIMGRIPSARGVGVLPQINSLRNSYSPWTLDRLRRRSPDGVFGTSRGA 220
           D R+R+ + T  SI+GRIP  R    L  + S RNS+S WTLD +RRRSPD V  +SRG 
Sbjct: 124 DARQRMPEPTDTSILGRIPPTRSADDLHHMYSSRNSFSSWTLDHIRRRSPDRVISSSRGL 183

Query: 221 SPPRNEEQSRRRPIIRAYDDVRSAAYLSKDGLELSRSMGTAS 346
           SPPRN +  +RRP+ R YDD R+ +Y++KD L+  RS+ ++S
Sbjct: 184 SPPRNVDNLQRRPLNRTYDDFRTVSYMNKDVLDTPRSVSSSS 225


>ref|XP_002311792.1| predicted protein [Populus trichocarpa] gi|222851612|gb|EEE89159.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/102 (50%), Positives = 68/102 (66%)
 Frame = +2

Query: 41  DDRRRLLDSTGASIMGRIPSARGVGVLPQINSLRNSYSPWTLDRLRRRSPDGVFGTSRGA 220
           D R  L D    SI+GRIP  R   VL  ++S RNS+SPWTLD +RRRSPD V  +S G 
Sbjct: 133 DARHCLPDPKDTSILGRIPPTRSADVLHHMDSSRNSFSPWTLDHIRRRSPDRVMSSSGGL 192

Query: 221 SPPRNEEQSRRRPIIRAYDDVRSAAYLSKDGLELSRSMGTAS 346
           SPPRN +  +RRP+ R YD VR+  Y++KD L+  RS+ +++
Sbjct: 193 SPPRNMDNLQRRPLNRTYDAVRTVPYMNKDVLDTPRSVSSST 234


>ref|XP_003519417.1| PREDICTED: uncharacterized protein LOC100797199 [Glycine max]
          Length = 337

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/89 (51%), Positives = 61/89 (68%)
 Frame = +2

Query: 62  DSTGASIMGRIPSARGVGVLPQINSLRNSYSPWTLDRLRRRSPDGVFGTSRGASPPRNEE 241
           +S   S++ +IPSAR    L ++ S+R+SYSPWTLD +RRRSPDG   TSRG SP R+ +
Sbjct: 130 ESRETSLLRQIPSARSSDDLLRMKSMRSSYSPWTLDHIRRRSPDGFPSTSRGISPQRDVQ 189

Query: 242 QSRRRPIIRAYDDVRSAAYLSKDGLELSR 328
              RRP+ R YD V S +Y+ +D LE SR
Sbjct: 190 DLHRRPVSRTYDGVSSVSYVGRDVLETSR 218


>ref|XP_003517859.1| PREDICTED: uncharacterized protein LOC100796844 [Glycine max]
          Length = 336

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/80 (56%), Positives = 57/80 (71%)
 Frame = +2

Query: 89  RIPSARGVGVLPQINSLRNSYSPWTLDRLRRRSPDGVFGTSRGASPPRNEEQSRRRPIIR 268
           +IPSAR    L ++ S+R+SYSPWTLD +RRRSPDG   TSRG SP R+ +   RRP+ R
Sbjct: 138 QIPSARSSDKLLRMESMRSSYSPWTLDHIRRRSPDGFPSTSRGISPQRDVQDLHRRPVSR 197

Query: 269 AYDDVRSAAYLSKDGLELSR 328
            YD VRS +Y+ +D LE SR
Sbjct: 198 TYDGVRSVSYVGRDVLETSR 217


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