BLASTX nr result

ID: Panax21_contig00023383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00023383
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534524.1| conserved hypothetical protein [Ricinus comm...    64   2e-08
ref|XP_002334816.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002306563.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07

>ref|XP_002534524.1| conserved hypothetical protein [Ricinus communis]
           gi|223525112|gb|EEF27860.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 146

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 42/121 (34%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
 Frame = +1

Query: 31  CKKHPDHRQQPGVCSICLREKXXXXXXXXXXXXQMIRTIVXXXXXXXXXXXXXXXXXITP 210
           C  HP H Q+ GVC  CLRE+                  +                 I+P
Sbjct: 5   CMDHPYHNQKQGVCPCCLRERLSKLYAVAATAPMAAAAELSYSSSVMSCSSVSSFNHISP 64

Query: 211 PIHQRHRRHASTGGSLRFIISSTAG---GLKKSRSIAFIATSEEEDGKH--TKKGGFWKK 375
             H+  R  +   GS+ F +SS  G   GLKKSRSIAF+  S   D  H   KK GFW K
Sbjct: 65  LRHRHQRTASDIMGSMSFKVSSALGSNYGLKKSRSIAFVTRSLVGDVTHGKNKKKGFWSK 124

Query: 376 L 378
           L
Sbjct: 125 L 125


>ref|XP_002334816.1| predicted protein [Populus trichocarpa] gi|222874982|gb|EEF12113.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/116 (31%), Positives = 46/116 (39%)
 Frame = +1

Query: 31  CKKHPDHRQQPGVCSICLREKXXXXXXXXXXXXQMIRTIVXXXXXXXXXXXXXXXXXITP 210
           CKKHP H Q PGVCS+CL EK                  +                  +P
Sbjct: 20  CKKHPKHEQPPGVCSVCLSEKLSQLPTSATTSRIASLNTMDCSSSCSLSSYSSFSSYSSP 79

Query: 211 PIHQRHRRHASTGGSLRFIISSTAGGLKKSRSIAFIATSEEEDGKHTKKGGFWKKL 378
             H ++  H    GS     +     L KSRS+AF+     +D    KKGGFW KL
Sbjct: 80  MHHFQYPTHGK--GSFPLFFNGKNMFLTKSRSLAFVPRRGNKDCHEKKKGGFWSKL 133


>ref|XP_002306563.1| predicted protein [Populus trichocarpa] gi|222856012|gb|EEE93559.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/116 (31%), Positives = 46/116 (39%)
 Frame = +1

Query: 31  CKKHPDHRQQPGVCSICLREKXXXXXXXXXXXXQMIRTIVXXXXXXXXXXXXXXXXXITP 210
           CKKHP H Q PGVCS+CL EK                  +                  +P
Sbjct: 20  CKKHPKHEQPPGVCSVCLSEKLSQLPTSATTSRIASLNAMDCSSSCSLSSYSSFSSYSSP 79

Query: 211 PIHQRHRRHASTGGSLRFIISSTAGGLKKSRSIAFIATSEEEDGKHTKKGGFWKKL 378
             H ++  H    GS     +     L KSRS+AF+     +D    KKGGFW KL
Sbjct: 80  MHHFQYPTHGK--GSFPLFFNGKNMFLTKSRSLAFVPRRGNKDCHEKKKGGFWSKL 133